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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3091 A_BomoMG_comp18714_c1_seq1
417bp
FPKM:1.38 TPM:1.09
3092 A_BomoMG_comp18715_c0_seq1
397bp
FPKM:2.08 TPM:1.65
3093 A_BomoMG_comp18717_c0_seq1
317bp
FPKM:2.19 TPM:1.73
3094 A_BomoMG_comp18718_c0_seq1
259bp
 putative_Rho_guanine_nucleotide_exchange_factor_11_[Operophtera_brumata]
FPKM:3.00 TPM:2.37
3095 A_BomoMG_comp18719_c0_seq1
276bp
FPKM:1.74 TPM:1.37
3096 A_BomoMG_comp18722_c0_seq1
308bp
FPKM:1.85 TPM:1.46
3097 A_BomoMG_comp18723_c0_seq1
329bp
 PREDICTED:_serine/threonine-protein_kinase_SMG1_[Bombyx_mori]
FPKM:2.05 TPM:1.62
3098 A_BomoMG_comp18726_c0_seq1
338bp
FPKM:1.76 TPM:1.39
3099 A_BomoMG_comp18726_c1_seq1
389bp
FPKM:2.61 TPM:2.07
3100 A_BomoMG_comp18727_c0_seq1
314bp
FPKM:2.23 TPM:1.76
3101 A_BomoMG_comp18727_c1_seq1
249bp
 PREDICTED:_putative_ankyrin_repeat_protein_RF_0381_[Microplitis_demolitor]
FPKM:4.39 TPM:3.47
3102 A_BomoMG_comp18729_c0_seq1
265bp
 PREDICTED:_probable_ATP-dependent_RNA_helicase_pitchoune_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003724 F RNA helicase activity
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0008283 P cell population proliferation
GO:0010501 P RNA secondary structure unwinding
GO:0016049 P cell growth
GO:0016787 F hydrolase activity
GO:0019233 P sensory perception of pain
FPKM:0.95 TPM:0.75
3103 A_BomoMG_comp187327_c0_seq1
296bp
 PREDICTED:_uncharacterized_protein_LOC105842369_[Bombyx_mori]
FPKM:4.76 TPM:3.76
3104 A_BomoMG_comp18732_c0_seq1
721bp
FPKM:0.66 TPM:0.52
3105 A_BomoMG_comp18732_c0_seq2
671bp
FPKM:0.83 TPM:0.66
3106 A_BomoMG_comp18733_c0_seq1
497bp
 putative_serine/threonine-protein_kinase_[Danaus_plexippus]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0006468 P protein phosphorylation
GO:0006915 P apoptotic process
GO:0007420 P brain development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030424 C axon
GO:0030425 C dendrite
GO:0030426 C growth cone
GO:0030517 P negative regulation of axon extension
GO:0032482 P Rab protein signal transduction
GO:0038083 P peptidyl-tyrosine autophosphorylation
GO:0042995 C cell projection
GO:0044295 C axonal growth cone
GO:0046777 P protein autophosphorylation
GO:0048471 C perinuclear region of cytoplasm
GO:0051402 P neuron apoptotic process
GO:0055037 C recycling endosome
FPKM:1.70 TPM:1.34
3107 A_BomoMG_comp187358_c0_seq1
468bp
FPKM:4.05 TPM:3.20
3108 A_BomoMG_comp187377_c0_seq1
450bp
FPKM:2.21 TPM:1.75
3109 A_BomoMG_comp18737_c0_seq1
405bp
FPKM:1.73 TPM:1.37
3110 A_BomoMG_comp18738_c0_seq1
256bp
 hypothetical_protein_UY52_C0051G0003_[Parcubacteria_group_bacterium_GW2011_GWC2_49_9]
FPKM:3.08 TPM:2.43
3111 A_BomoMG_comp18740_c0_seq1
304bp
FPKM:2.37 TPM:1.88
3112 A_BomoMG_comp18741_c0_seq1
555bp
 PREDICTED:_adenylate_cyclase_type_6_[Bombyx_mori]
FPKM:1.73 TPM:1.37
3113 A_BomoMG_comp18743_c0_seq1
516bp
 PREDICTED:_tubulin_polyglutamylase_TTLL4-like_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005929 C cilium
GO:0006464 P cellular protein modification process
GO:0015631 F tubulin binding
GO:0016874 F ligase activity
GO:0018095 P protein polyglutamylation
GO:0018200 P peptidyl-glutamic acid modification
GO:0042995 C cell projection
GO:0070739 F protein-glutamic acid ligase activity
FPKM:2.01 TPM:1.59
3114 A_BomoMG_comp18743_c1_seq1
915bp
 PREDICTED:_tubulin_polyglutamylase_TTLL4-like_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005929 C cilium
GO:0006464 P cellular protein modification process
GO:0015631 F tubulin binding
GO:0016874 F ligase activity
GO:0018095 P protein polyglutamylation
GO:0018200 P peptidyl-glutamic acid modification
GO:0042995 C cell projection
GO:0070739 F protein-glutamic acid ligase activity
FPKM:2.22 TPM:1.76
3115 A_BomoMG_comp18744_c0_seq1
282bp
 ORF_A_span_522-1895;_first_start_codon_at_663_[Autographa_californica_nucleopolyhedrovirus]
FPKM:1.93 TPM:1.53
3116 A_BomoMG_comp18745_c0_seq1
399bp
 Synaptosomal-associated_protein_25_[Papilio_machaon]
FPKM:1.92 TPM:1.52
3117 A_BomoMG_comp18746_c0_seq1
401bp
 PREDICTED:_zinc_finger_protein_1-like_[Bombyx_mori]
FPKM:2.20 TPM:1.74
3118 A_BomoMG_comp18747_c0_seq1
239bp
FPKM:2.43 TPM:1.92
3119 A_BomoMG_comp187480_c0_seq1
1034bp
 origin_recognition_complex_subunit_2_[Bombyx_mori]
GO:0000775 C chromosome, centromeric region
GO:0000792 C heterochromatin
GO:0000808 C origin recognition complex
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005664 C nuclear origin of replication recognition complex
GO:0005694 C chromosome
GO:0005723 C alpha-heterochromatin
GO:0006260 P DNA replication
GO:0006261 P DNA-dependent DNA replication
GO:0006270 P DNA replication initiation
GO:0006342 P heterochromatin assembly
GO:0007052 P mitotic spindle organization
GO:0007076 P mitotic chromosome condensation
GO:0007307 P eggshell chorion gene amplification
GO:0008283 P cell population proliferation
GO:0022008 P neurogenesis
GO:0030261 P chromosome condensation
FPKM:2.26 TPM:1.78
3120 A_BomoMG_comp18748_c0_seq1
417bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_histone_deacetylase_5_[Tarsius_syrichta]
FPKM:2.62 TPM:2.07
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