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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3121 A_BomoMG_comp18748_c1_seq1
423bp
 PREDICTED:_tyrosine-protein_kinase_transmembrane_receptor_Ror_[Tribolium_castaneum]
FPKM:0.94 TPM:0.75
3122 A_BomoMG_comp187495_c0_seq1
665bp
 ATP_synthase_F0_subunit_6_(mitochondrion)_[Marisa_cornuarietis]
FPKM:2.51 TPM:1.98
3123 A_BomoMG_comp18749_c0_seq1
303bp
 PREDICTED:_serine/threonine-protein_kinase_D1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001525 P angiogenesis
GO:0001938 P positive regulation of endothelial cell proliferation
GO:0002376 P immune system process
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004697 F protein kinase C activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0005938 C cell cortex
GO:0006468 P protein phosphorylation
GO:0006915 P apoptotic process
GO:0006954 P inflammatory response
GO:0007030 P Golgi organization
GO:0007265 P Ras protein signal transduction
GO:0007399 P nervous system development
GO:0010595 P positive regulation of endothelial cell migration
GO:0010837 P regulation of keratinocyte proliferation
GO:0010976 P positive regulation of neuron projection development
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018105 P peptidyl-serine phosphorylation
GO:0030154 P cell differentiation
GO:0031647 P regulation of protein stability
GO:0032793 P positive regulation of CREB transcription factor activity
GO:0033138 P positive regulation of peptidyl-serine phosphorylation
GO:0034599 P cellular response to oxidative stress
GO:0035556 P intracellular signal transduction
GO:0035924 P cellular response to vascular endothelial growth factor stimulus
GO:0038033 P positive regulation of endothelial cell chemotaxis by VEGF-activated vascular endothelial growth factor receptor signaling pathway
GO:0042802 F identical protein binding
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043536 P positive regulation of blood vessel endothelial cell migration
GO:0045087 P innate immune response
GO:0045669 P positive regulation of osteoblast differentiation
GO:0045766 P positive regulation of angiogenesis
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046777 P protein autophosphorylation
GO:0046872 F metal ion binding
GO:0048010 P vascular endothelial growth factor receptor signaling pathway
GO:0048193 P Golgi vesicle transport
GO:0051092 P positive regulation of NF-kappaB transcription factor activity
GO:0051279 P regulation of release of sequestered calcium ion into cytosol
GO:0060548 P negative regulation of cell death
GO:0089700 P protein kinase D signaling
GO:1901727 P positive regulation of histone deacetylase activity
GO:2001028 P positive regulation of endothelial cell chemotaxis
FPKM:2.87 TPM:2.27
3124 A_BomoMG_comp18751_c0_seq1
243bp
FPKM:0.39 TPM:0.31
3125 A_BomoMG_comp18751_c1_seq1
339bp
 hypothetical_protein_[Clostridiales_bacterium_VE202-27]
FPKM:2.13 TPM:1.69
3126 A_BomoMG_comp18752_c0_seq1
1002bp
 PREDICTED:_WEB_family_protein_At4g27595,_chloroplastic-like_isoform_X2_[Bombyx_mori]
FPKM:1.61 TPM:1.27
3127 A_BomoMG_comp18755_c0_seq1
454bp
FPKM:1.70 TPM:1.34
3128 A_BomoMG_comp18756_c0_seq1
760bp
FPKM:1.64 TPM:1.29
3129 A_BomoMG_comp18757_c0_seq1
217bp
 PREDICTED:_proline_dehydrogenase_1,_mitochondrial_isoform_X2_[Bombyx_mori]
GO:0004657 F proline dehydrogenase activity
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006537 P glutamate biosynthetic process
GO:0006560 P proline metabolic process
GO:0006562 P proline catabolic process
GO:0007626 P locomotory behavior
GO:0010133 P proline catabolic process to glutamate
GO:0016491 F oxidoreductase activity
GO:0042331 P phototaxis
GO:0055114 P obsolete oxidation-reduction process
GO:0071949 F FAD binding
FPKM:5.29 TPM:4.18
3130 A_BomoMG_comp18758_c0_seq1
561bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_notch-like_protein_isoform_X1_[Bombyx_mori]
FPKM:1.97 TPM:1.56
3131 A_BomoMG_comp18758_c1_seq1
590bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_notch-like_protein_isoform_X1_[Bombyx_mori]
FPKM:1.76 TPM:1.39
3132 A_BomoMG_comp18760_c0_seq1
311bp
 ATPase_AAA_[Candidatus_Entotheonella_sp._TSY1]
FPKM:2.50 TPM:1.98
3133 A_BomoMG_comp18761_c0_seq1
205bp
 PREDICTED:_uncharacterized_protein_LOC101746965_[Bombyx_mori]
FPKM:5.05 TPM:3.99
3134 A_BomoMG_comp187628_c0_seq1
268bp
FPKM:4.63 TPM:3.66
3135 A_BomoMG_comp18763_c0_seq1
471bp
FPKM:2.29 TPM:1.81
3136 A_BomoMG_comp18765_c0_seq1
230bp
FPKM:1.79 TPM:1.42
3137 A_BomoMG_comp18766_c0_seq1
380bp
FPKM:2.08 TPM:1.64
3138 A_BomoMG_comp18766_c1_seq1
488bp
FPKM:2.07 TPM:1.64
3139 A_BomoMG_comp187671_c0_seq1
306bp
FPKM:1.88 TPM:1.48
3140 A_BomoMG_comp18767_c0_seq1
469bp
FPKM:2.19 TPM:1.73
3141 A_BomoMG_comp18767_c1_seq1
276bp
 leucyl/phenylalanyl-tRNA-protein_transferase_[Legionella_maceachernii]
FPKM:2.31 TPM:1.83
3142 A_BomoMG_comp18768_c0_seq1
217bp
FPKM:3.17 TPM:2.51
3143 A_BomoMG_comp18769_c0_seq1
433bp
 PREDICTED:_zinc_finger_protein_484-like_isoform_X3_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
FPKM:0.65 TPM:0.51
3144 A_BomoMG_comp18769_c0_seq2
576bp
 PREDICTED:_zinc_finger_protein_484-like_isoform_X3_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
FPKM:1.04 TPM:0.82
3145 A_BomoMG_comp18770_c0_seq1
470bp
 PREDICTED:_shootin-1-like_[Amyelois_transitella]
FPKM:2.42 TPM:1.91
3146 A_BomoMG_comp187714_c0_seq1
459bp
 serpin-24_[Bombyx_mori]
FPKM:3.46 TPM:2.73
3147 A_BomoMG_comp18771_c0_seq1
379bp
FPKM:3.37 TPM:2.66
3148 A_BomoMG_comp18772_c0_seq1
280bp
FPKM:3.37 TPM:2.66
3149 A_BomoMG_comp187745_c0_seq1
340bp
FPKM:2.32 TPM:1.83
3150 A_BomoMG_comp18774_c0_seq1
329bp
 PREDICTED:_WD_repeat-containing_protein_64-like,_partial_[Tinamus_guttatus]
FPKM:2.05 TPM:1.62
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