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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3061 A_BomoMG_comp18682_c0_seq1
214bp
FPKM:3.86 TPM:3.05
3062 A_BomoMG_comp186837_c0_seq1
396bp
 heat_shock_protein_25.4_precursor_[Bombyx_mori]
FPKM:4.18 TPM:3.31
3063 A_BomoMG_comp18686_c0_seq1
229bp
FPKM:4.54 TPM:3.59
3064 A_BomoMG_comp18687_c0_seq1
990bp
 PREDICTED:_growth_arrest-specific_protein_1-like_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0007049 P cell cycle
GO:0007050 P regulation of cell cycle
GO:0008589 P regulation of smoothened signaling pathway
GO:0010955 P negative regulation of protein processing
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031225 C anchored component of membrane
GO:0035924 P cellular response to vascular endothelial growth factor stimulus
GO:0042981 P regulation of apoptotic process
GO:0045165 P cell fate commitment
GO:0045930 P negative regulation of mitotic cell cycle
GO:0046658 C anchored component of plasma membrane
GO:0048589 P developmental growth
GO:0060628 P regulation of ER to Golgi vesicle-mediated transport
FPKM:1.36 TPM:1.08
3065 A_BomoMG_comp18687_c1_seq1
283bp
 PREDICTED:_growth_arrest-specific_protein_1-like_[Bombyx_mori]
FPKM:1.92 TPM:1.52
3066 A_BomoMG_comp18688_c0_seq1
625bp
 PREDICTED:_23_kDa_integral_membrane_protein-like_[Papilio_polytes]
FPKM:1.79 TPM:1.41
3067 A_BomoMG_comp186896_c0_seq1
247bp
 peptidase_U32_[Thermosulfidibacter_takaii_ABI70S6]
FPKM:1.12 TPM:0.88
3068 A_BomoMG_comp186901_c0_seq1
303bp
FPKM:2.15 TPM:1.70
3069 A_BomoMG_comp18691_c0_seq1
236bp
FPKM:3.35 TPM:2.65
3070 A_BomoMG_comp18692_c0_seq1
290bp
FPKM:2.09 TPM:1.65
3071 A_BomoMG_comp186937_c0_seq1
399bp
FPKM:4.28 TPM:3.38
3072 A_BomoMG_comp18694_c0_seq1
273bp
 hypothetical_protein_RR48_08029_[Papilio_machaon]
FPKM:1.18 TPM:0.94
3073 A_BomoMG_comp18694_c0_seq2
458bp
 DNA-binding_protein_SATB2_[Papilio_xuthus]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000785 C chromatin
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001227 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003690 F double-stranded DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005720 C heterochromatin
GO:0006325 P chromatin organization
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006921 P cellular component disassembly involved in execution phase of apoptosis
GO:0008544 P epidermis development
GO:0016032 P viral process
GO:0016363 C nuclear matrix
GO:0016568 P chromatin organization
GO:0016571 P histone methylation
GO:0016605 C PML body
GO:0042110 P T cell activation
GO:0043367 P CD4-positive, alpha-beta T cell differentiation
GO:0043374 P CD8-positive, alpha-beta T cell differentiation
GO:0050798 P activated T cell proliferation
GO:0060004 P reflex
FPKM:1.79 TPM:1.42
3074 A_BomoMG_comp18698_c0_seq1
288bp
 PREDICTED:_uncharacterized_protein_LOC101743995_[Bombyx_mori]
FPKM:2.91 TPM:2.30
3075 A_BomoMG_comp18698_c1_seq1
582bp
 PREDICTED:_uncharacterized_protein_LOC101743995_[Bombyx_mori]
FPKM:1.28 TPM:1.01
3076 A_BomoMG_comp186999_c0_seq1
413bp
FPKM:3.78 TPM:2.98
3077 A_BomoMG_comp187010_c0_seq1
1103bp
 PREDICTED:_zinc_finger_protein_28-like_isoform_X1_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
FPKM:3.07 TPM:2.42
3078 A_BomoMG_comp18701_c0_seq1
539bp
 Bm-brown_protein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0006810 P transport
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0031409 F pigment binding
FPKM:1.52 TPM:1.20
3079 A_BomoMG_comp18702_c0_seq1
330bp
 hypothetical_protein_[Draconibacterium_orientale]
FPKM:1.83 TPM:1.45
3080 A_BomoMG_comp18702_c1_seq1
323bp
 PREDICTED:_uncharacterized_protein_LOC101746935_isoform_X1_[Bombyx_mori]
FPKM:1.91 TPM:1.51
3081 A_BomoMG_comp18704_c0_seq1
608bp
 PREDICTED:_rapamycin-insensitive_companion_of_mTOR_[Bombyx_mori]
GO:0001932 P regulation of protein phosphorylation
GO:0001938 P positive regulation of endothelial cell proliferation
GO:0005515 F protein binding
GO:0007275 P multicellular organism development
GO:0008047 F enzyme activator activity
GO:0009790 P embryo development
GO:0010468 P regulation of gene expression
GO:0018105 P peptidyl-serine phosphorylation
GO:0019901 F protein kinase binding
GO:0030838 P positive regulation of actin filament polymerization
GO:0030950 P establishment or maintenance of actin cytoskeleton polarity
GO:0031532 P actin cytoskeleton reorganization
GO:0031929 P TOR signaling
GO:0031932 C TORC2 complex
GO:0032008 P positive regulation of TOR signaling
GO:0032956 P regulation of actin cytoskeleton organization
GO:0033135 P regulation of peptidyl-serine phosphorylation
GO:0042325 P regulation of phosphorylation
GO:0043022 F ribosome binding
GO:0043085 P positive regulation of catalytic activity
GO:0043087 P regulation of GTPase activity
GO:0050727 P regulation of inflammatory response
GO:0050731 P positive regulation of peptidyl-tyrosine phosphorylation
GO:0051896 P regulation of protein kinase B signaling
GO:0051897 P positive regulation of protein kinase B signaling
GO:2000114 P regulation of establishment of cell polarity
FPKM:1.69 TPM:1.34
3082 A_BomoMG_comp18705_c0_seq1
563bp
FPKM:3.21 TPM:2.54
3083 A_BomoMG_comp18707_c0_seq1
471bp
 Gag-pol_polyprotein,_partial_[Operophtera_brumata]
FPKM:1.84 TPM:1.45
3084 A_BomoMG_comp18707_c1_seq1
239bp
 Gag-pol_polyprotein,_partial_[Operophtera_brumata]
FPKM:1.22 TPM:0.96
3085 A_BomoMG_comp18709_c0_seq1
310bp
FPKM:1.60 TPM:1.26
3086 A_BomoMG_comp18710_c0_seq1
327bp
 hypothetical_protein_[Burkholderia_sordidicola]
FPKM:2.07 TPM:1.64
3087 A_BomoMG_comp18712_c0_seq1
432bp
FPKM:1.96 TPM:1.55
3088 A_BomoMG_comp18713_c0_seq1
259bp
FPKM:2.00 TPM:1.58
3089 A_BomoMG_comp18713_c1_seq1
210bp
FPKM:1.17 TPM:0.92
3090 A_BomoMG_comp18714_c0_seq1
271bp
FPKM:3.31 TPM:2.62
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