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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2971 A_BomoMG_comp18608_c0_seq1
411bp
FPKM:1.97 TPM:1.56
2972 A_BomoMG_comp18609_c0_seq1
942bp
 PREDICTED:_phagocyte_signaling-impaired_protein_isoform_X1_[Bombyx_mori]
GO:0002376 P immune system process
GO:0003674 F molecular_function
GO:0005764 C lysosome
GO:0006911 P phagocytosis, engulfment
GO:0006955 P immune response
GO:0045087 P innate immune response
FPKM:1.87 TPM:1.48
2973 A_BomoMG_comp18609_c1_seq1
319bp
 type_VI_secretion_system_protein_ImpL_[Erwinia_amylovora]
FPKM:1.52 TPM:1.20
2974 A_BomoMG_comp186107_c0_seq1
255bp
 pilus_assembly_protein_TapZ_[Aeromonas_jandaei]
FPKM:4.49 TPM:3.55
2975 A_BomoMG_comp18612_c0_seq1
303bp
 PREDICTED:_uncharacterized_protein_LOC101736423_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001106 F transcription corepressor activity
GO:0001701 P in utero embryonic development
GO:0001824 P blastocyst development
GO:0005634 C nucleus
FPKM:1.67 TPM:1.32
2976 A_BomoMG_comp186134_c0_seq1
774bp
 PREDICTED:_OTU_domain-containing_protein_7B-like_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0002376 P immune system process
GO:0002385 P mucosal immune response
GO:0003677 F DNA binding
GO:0004843 F thiol-dependent deubiquitinase
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0006955 P immune response
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008270 F zinc ion binding
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0032717 P negative regulation of interleukin-8 production
GO:0035871 P protein K11-linked deubiquitination
GO:0036459 F thiol-dependent deubiquitinase
GO:0043124 P negative regulation of I-kappaB kinase/NF-kappaB signaling
GO:0046872 F metal ion binding
GO:0070530 F K63-linked polyubiquitin modification-dependent protein binding
GO:0070536 P protein K63-linked deubiquitination
GO:0071108 P protein K48-linked deubiquitination
GO:0071947 P protein deubiquitination involved in ubiquitin-dependent protein catabolic process
GO:1900181 P negative regulation of protein localization to nucleus
GO:1990380 F Lys48-specific deubiquitinase activity
FPKM:3.97 TPM:3.13
2977 A_BomoMG_comp18613_c0_seq1
213bp
FPKM:3.36 TPM:2.65
2978 A_BomoMG_comp18616_c0_seq1
243bp
FPKM:3.88 TPM:3.07
2979 A_BomoMG_comp18617_c0_seq1
995bp
 Uncharacterized_protein_OBRU01_24682_[Operophtera_brumata]
FPKM:1.71 TPM:1.35
2980 A_BomoMG_comp18618_c0_seq1
347bp
 PREDICTED:_E3_ubiquitin-protein_ligase_MYCBP2-like_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
FPKM:3.35 TPM:2.65
2981 A_BomoMG_comp18618_c1_seq1
674bp
 PREDICTED:_E3_ubiquitin-protein_ligase_MYCBP2-like_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005886 C plasma membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006914 P autophagy
GO:0007616 P long-term memory
GO:0007628 P adult walking behavior
GO:0008270 F zinc ion binding
GO:0008582 P regulation of synaptic assembly at neuromuscular junction
GO:0016023 C cytoplasmic vesicle
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030509 P BMP signaling pathway
GO:0030514 P negative regulation of BMP signaling pathway
GO:0040011 P locomotion
GO:0045886 P negative regulation of synaptic assembly at neuromuscular junction
GO:0046872 F metal ion binding
GO:0048678 P response to axon injury
GO:0050808 P synapse organization
GO:2000331 P regulation of terminal button organization
FPKM:2.25 TPM:1.78
2982 A_BomoMG_comp18619_c0_seq1
328bp
FPKM:2.88 TPM:2.28
2983 A_BomoMG_comp186202_c0_seq1
621bp
 PREDICTED:_TWiK_family_of_potassium_channels_protein_7_[Amyelois_transitella]
FPKM:2.35 TPM:1.86
2984 A_BomoMG_comp18620_c0_seq1
333bp
 hypothetical_protein_RF11_04267_[Thelohanellus_kitauei]
FPKM:2.00 TPM:1.58
2985 A_BomoMG_comp18621_c0_seq1
715bp
 putative_hedgehog_receptor_[Danaus_plexippus]
GO:0001746 P Bolwig's organ morphogenesis
GO:0004888 F transmembrane signaling receptor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005929 C cilium
GO:0006508 P proteolysis
GO:0006898 P receptor-mediated endocytosis
GO:0007224 P smoothened signaling pathway
GO:0007275 P multicellular organism development
GO:0007346 P regulation of mitotic cell cycle
GO:0007350 P blastoderm segmentation
GO:0007367 P segment polarity determination
GO:0007411 P axon guidance
GO:0007422 P peripheral nervous system development
GO:0007455 P eye-antennal disc morphogenesis
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0008158 F hedgehog receptor activity
GO:0008406 P gonad development
GO:0009880 P embryonic pattern specification
GO:0009952 P anterior/posterior pattern specification
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016311 P dephosphorylation
GO:0030139 C endocytic vesicle
GO:0030228 F lipoprotein particle receptor activity
GO:0030707 P ovarian follicle cell development
GO:0035225 P determination of genital disc primordium
GO:0042078 P germ-line stem cell division
GO:0042306 P regulation of protein import into nucleus
GO:0042981 P regulation of apoptotic process
GO:0045169 C fusome
GO:0045879 P negative regulation of smoothened signaling pathway
GO:0048099 P anterior/posterior lineage restriction, imaginal disc
GO:0048100 P wing disc anterior/posterior pattern formation
GO:0048103 P somatic stem cell division
GO:0048471 C perinuclear region of cytoplasm
GO:0048477 P oogenesis
GO:0055088 P lipid homeostasis
GO:2000274 P regulation of epithelial cell migration, open tracheal system
FPKM:1.31 TPM:1.03
2986 A_BomoMG_comp18622_c0_seq1
237bp
FPKM:4.56 TPM:3.60
2987 A_BomoMG_comp18623_c0_seq1
399bp
 uncharacterized_protein_LOC767623_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001933 P negative regulation of protein phosphorylation
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005844 C polysome
GO:0006417 P regulation of translation
GO:0006446 P regulation of translational initiation
GO:0007399 P nervous system development
GO:0030154 P cell differentiation
GO:0031333 P negative regulation of protein-containing complex assembly
GO:0031953 P negative regulation of protein autophosphorylation
GO:0034198 P cellular response to amino acid starvation
GO:0042149 P cellular response to glucose starvation
GO:0043022 F ribosome binding
GO:0045666 P positive regulation of neuron differentiation
GO:0060548 P negative regulation of cell death
GO:0060733 P GCN2-mediated signaling
GO:0070301 P cellular response to hydrogen peroxide
GO:0071264 P positive regulation of translational initiation in response to starvation
GO:0071468 P cellular response to acidic pH
GO:0071494 P cellular response to UV-C
GO:0072755 P cellular response to benomyl
GO:0097201 P negative regulation of transcription from RNA polymerase II promoter in response to stress
GO:1990138 P neuron projection extension
GO:1990253 P cellular response to leucine starvation
FPKM:1.92 TPM:1.52
2988 A_BomoMG_comp18624_c0_seq1
379bp
FPKM:0.00 TPM:0.00
2989 A_BomoMG_comp18624_c0_seq2
745bp
FPKM:1.43 TPM:1.13
2990 A_BomoMG_comp18626_c0_seq1
361bp
FPKM:3.48 TPM:2.75
2991 A_BomoMG_comp18626_c1_seq1
534bp
FPKM:1.34 TPM:1.06
2992 A_BomoMG_comp18627_c0_seq1
322bp
FPKM:1.28 TPM:1.01
2993 A_BomoMG_comp186300_c0_seq1
671bp
FPKM:2.76 TPM:2.18
2994 A_BomoMG_comp186301_c0_seq1
544bp
 hypothetical_protein_[Streptomyces_sp._NRRL_F-5650]
FPKM:4.02 TPM:3.18
2995 A_BomoMG_comp186302_c0_seq1
720bp
FPKM:2.20 TPM:1.74
2996 A_BomoMG_comp186304_c0_seq1
216bp
 leucyl_aminopeptidase-like_protein_[Bombyx_mori]
FPKM:8.58 TPM:6.78
2997 A_BomoMG_comp18630_c0_seq1
297bp
FPKM:1.74 TPM:1.37
2998 A_BomoMG_comp186314_c0_seq1
732bp
FPKM:3.05 TPM:2.41
2999 A_BomoMG_comp18632_c0_seq1
221bp
 PREDICTED:_protein_split_ends_isoform_X3_[Tribolium_castaneum]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0001085 F RNA polymerase II-specific DNA-binding transcription factor binding
GO:0001191 F obsolete transcriptional repressor activity, RNA polymerase II transcription factor binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003714 F transcription corepressor activity
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007219 P Notch signaling pathway
GO:0017053 C transcription repressor complex
GO:0044822 F RNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0050769 P positive regulation of neurogenesis
GO:0070062 C extracellular exosome
FPKM:4.01 TPM:3.17
3000 A_BomoMG_comp18634_c0_seq1
442bp
FPKM:2.42 TPM:1.91
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