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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2821 A_BomoMG_comp18471_c0_seq1
273bp
FPKM:2.07 TPM:1.64
2822 A_BomoMG_comp18472_c0_seq1
247bp
FPKM:2.61 TPM:2.06
2823 A_BomoMG_comp18473_c0_seq1
377bp
FPKM:1.78 TPM:1.41
2824 A_BomoMG_comp18476_c0_seq1
300bp
 PREDICTED:_gastrula_zinc_finger_protein_XlCGF17.1-like_[Amyelois_transitella]
FPKM:2.19 TPM:1.73
2825 A_BomoMG_comp18477_c0_seq1
266bp
FPKM:1.57 TPM:1.24
2826 A_BomoMG_comp18482_c0_seq1
295bp
 PREDICTED:_importin-13_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006606 P protein import into nucleus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008139 F nuclear localization sequence binding
GO:0008536 F small GTPase binding
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0031965 C nuclear membrane
FPKM:1.51 TPM:1.19
2827 A_BomoMG_comp18484_c0_seq1
201bp
FPKM:3.37 TPM:2.66
2828 A_BomoMG_comp18485_c0_seq1
419bp
 leucyl_aminopeptidase-like_protein_[Bombyx_mori]
GO:0004177 F aminopeptidase activity
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008235 F metalloexopeptidase activity
GO:0016787 F hydrolase activity
GO:0019538 P protein metabolic process
GO:0030145 F manganese ion binding
GO:0046872 F metal ion binding
FPKM:1.37 TPM:1.08
2829 A_BomoMG_comp18486_c0_seq1
280bp
FPKM:0.84 TPM:0.66
2830 A_BomoMG_comp18487_c0_seq1
280bp
 cell_division_cycle_2_like-1_[Bombyx_mori]
FPKM:2.24 TPM:1.77
2831 A_BomoMG_comp18490_c0_seq1
1074bp
 hypothetical_protein_SERLADRAFT_463146_[Serpula_lacrymans_var._lacrymans_S7.9]
FPKM:1.84 TPM:1.45
2832 A_BomoMG_comp18491_c0_seq1
272bp
 helicase_[Desulfotomaculum_gibsoniae]
FPKM:1.49 TPM:1.18
2833 A_BomoMG_comp184927_c0_seq1
231bp
FPKM:0.00 TPM:0.00
2834 A_BomoMG_comp18492_c0_seq1
424bp
FPKM:1.61 TPM:1.27
2835 A_BomoMG_comp18492_c1_seq1
413bp
 hypothetical_protein_ACD_37C00656G0002_[uncultured_bacterium]
FPKM:2.24 TPM:1.77
2836 A_BomoMG_comp184968_c0_seq1
531bp
 PREDICTED:_laminin_subunit_gamma-1_[Papilio_polytes]
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0005605 C basement membrane
GO:0007155 P cell adhesion
GO:0007435 P salivary gland morphogenesis
GO:0007494 P midgut development
GO:0009887 P animal organ morphogenesis
GO:0009888 P tissue development
GO:0012505 C endomembrane system
GO:0031012 C extracellular matrix
GO:0033627 P cell adhesion mediated by integrin
GO:0034446 P substrate adhesion-dependent cell spreading
GO:0048598 P embryonic morphogenesis
GO:0048731 P system development
GO:0061031 P endodermal digestive tract morphogenesis
GO:0070831 P basement membrane assembly
GO:0085029 P extracellular matrix assembly
FPKM:2.52 TPM:1.99
2837 A_BomoMG_comp184981_c0_seq1
357bp
FPKM:2.48 TPM:1.96
2838 A_BomoMG_comp184988_c0_seq1
691bp
 hypothetical_protein_CRE_27753_[Caenorhabditis_remanei]
FPKM:3.34 TPM:2.64
2839 A_BomoMG_comp184990_c0_seq1
205bp
FPKM:7.58 TPM:5.99
2840 A_BomoMG_comp18499_c0_seq1
233bp
 FancJ-like_protein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000723 P telomere maintenance
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0004003 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006139 P nucleobase-containing compound metabolic process
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0008026 F helicase activity
GO:0010569 P regulation of double-strand break repair via homologous recombination
GO:0016787 F hydrolase activity
GO:0016818 F hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0032508 P DNA duplex unwinding
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
FPKM:2.60 TPM:2.05
2841 A_BomoMG_comp185006_c0_seq1
429bp
FPKM:3.56 TPM:2.81
2842 A_BomoMG_comp18500_c0_seq1
212bp
 PREDICTED:_gamma-butyrobetaine_dioxygenase_[Amyelois_transitella]
GO:0005506 F iron ion binding
GO:0005737 C cytoplasm
GO:0008270 F zinc ion binding
GO:0008336 F gamma-butyrobetaine dioxygenase activity
GO:0016491 F oxidoreductase activity
GO:0045329 P carnitine biosynthetic process
GO:0046872 F metal ion binding
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
FPKM:2.84 TPM:2.24
2843 A_BomoMG_comp185012_c0_seq1
260bp
FPKM:0.66 TPM:0.52
2844 A_BomoMG_comp18501_c0_seq1
482bp
FPKM:2.22 TPM:1.75
2845 A_BomoMG_comp18502_c0_seq1
261bp
FPKM:2.62 TPM:2.07
2846 A_BomoMG_comp18504_c0_seq1
240bp
FPKM:2.81 TPM:2.22
2847 A_BomoMG_comp185058_c0_seq1
763bp
 hypothetical_protein_[Selenomonas_sp._AE3005]
FPKM:2.83 TPM:2.24
2848 A_BomoMG_comp18505_c0_seq1
204bp
 PREDICTED:_MAGUK_p55_subfamily_member_6_[Bombyx_mori]
FPKM:0.00 TPM:0.00
2849 A_BomoMG_comp18505_c0_seq2
383bp
 PREDICTED:_MAGUK_p55_subfamily_member_6_[Bombyx_mori]
GO:0004385 F guanylate kinase activity
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030165 F PDZ domain binding
GO:0046037 P GMP metabolic process
GO:0046710 P GDP metabolic process
GO:0070062 C extracellular exosome
FPKM:1.73 TPM:1.37
2850 A_BomoMG_comp18506_c0_seq1
209bp
 PREDICTED:_proton-coupled_folate_transporter-like_[Bombyx_mori]
FPKM:2.37 TPM:1.88
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