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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2851 A_BomoMG_comp18507_c0_seq1
670bp
 PREDICTED:_protein-lysine_methyltransferase_METTL21D-like_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0005737 C cytoplasm
GO:0008168 F methyltransferase activity
GO:0016279 F protein-lysine N-methyltransferase activity
GO:0016740 F transferase activity
GO:0018023 P peptidyl-lysine trimethylation
GO:0032259 P methylation
FPKM:1.78 TPM:1.40
2852 A_BomoMG_comp185092_c0_seq1
260bp
FPKM:3.63 TPM:2.87
2853 A_BomoMG_comp185106_c0_seq1
397bp
FPKM:3.73 TPM:2.95
2854 A_BomoMG_comp18510_c0_seq1
216bp
 MULTISPECIES:_hypothetical_protein_[Sanguibacteroides]
FPKM:4.29 TPM:3.39
2855 A_BomoMG_comp185111_c0_seq1
425bp
FPKM:2.54 TPM:2.01
2856 A_BomoMG_comp185123_c0_seq1
715bp
FPKM:3.01 TPM:2.38
2857 A_BomoMG_comp185140_c0_seq1
374bp
FPKM:3.28 TPM:2.59
2858 A_BomoMG_comp18515_c0_seq1
243bp
 chromosome_partitioning_protein_ParB_[Desulfosporosinus_sp._I2]
FPKM:3.11 TPM:2.46
2859 A_BomoMG_comp18516_c0_seq1
240bp
 hypothetical_protein_VM57_03260_[Stenotrophomonas_maltophilia]
FPKM:2.81 TPM:2.22
2860 A_BomoMG_comp185171_c0_seq1
323bp
FPKM:4.23 TPM:3.35
2861 A_BomoMG_comp185176_c0_seq1
491bp
FPKM:3.13 TPM:2.48
2862 A_BomoMG_comp18517_c0_seq1
227bp
 candidate_tumor_suppressor_protein,_partial_[Papilio_polytes]
GO:0000010 F trans-hexaprenyltranstransferase activity
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006744 P ubiquinone biosynthetic process
GO:0008299 P isoprenoid biosynthetic process
GO:0016740 F transferase activity
GO:0046982 F protein heterodimerization activity
GO:0050347 F trans-octaprenyltranstransferase activity
GO:0050878 P regulation of body fluid levels
GO:0051290 P protein heterotetramerization
GO:1990234 C transferase complex
FPKM:1.86 TPM:1.47
2863 A_BomoMG_comp18519_c0_seq1
460bp
FPKM:1.54 TPM:1.22
2864 A_BomoMG_comp185215_c0_seq1
345bp
FPKM:3.58 TPM:2.83
2865 A_BomoMG_comp185216_c0_seq1
1274bp
 PREDICTED:_protein_4.1_homolog_[Bombyx_mori]
GO:0003015 P heart process
GO:0003674 F molecular_function
GO:0003779 F actin binding
GO:0005198 F structural molecule activity
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005918 C septate junction
GO:0005920 C smooth septate junction
GO:0006612 P protein targeting to membrane
GO:0007163 P establishment or maintenance of cell polarity
GO:0007275 P multicellular organism development
GO:0007391 P dorsal closure
GO:0007435 P salivary gland morphogenesis
GO:0007527 P adult somatic muscle development
GO:0008092 F cytoskeletal protein binding
GO:0008362 P chitin-based embryonic cuticle biosynthetic process
GO:0009790 P embryo development
GO:0019991 P septate junction assembly
GO:0030054 C cell junction
GO:0035151 P regulation of tube size, open tracheal system
GO:0035321 P maintenance of imaginal disc-derived wing hair orientation
GO:0045169 C fusome
GO:0045170 C spectrosome
GO:0045216 P cell-cell junction organization
GO:0060857 P establishment of glial blood-brain barrier
GO:0061343 P cell adhesion involved in heart morphogenesis
FPKM:3.02 TPM:2.39
2866 A_BomoMG_comp18521_c0_seq1
283bp
 PREDICTED:_probable_ATP-dependent_RNA_helicase_ddx20_isoform_X2_[Papilio_polytes]
FPKM:2.74 TPM:2.17
2867 A_BomoMG_comp18521_c1_seq1
1053bp
 PREDICTED:_probable_ATP-dependent_RNA_helicase_DDX20_isoform_X3_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0008150 P biological_process
GO:0008380 P RNA splicing
GO:0010501 P RNA secondary structure unwinding
GO:0016787 F hydrolase activity
FPKM:2.50 TPM:1.97
2868 A_BomoMG_comp18523_c0_seq1
426bp
 PREDICTED:_zinc_finger_BED_domain-containing_protein_1-like_[Diuraphis_noxia]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0006310 P DNA recombination
GO:0032196 P transposition
GO:0046983 F protein dimerization activity
FPKM:1.73 TPM:1.37
2869 A_BomoMG_comp18524_c0_seq1
872bp
 PREDICTED:_tRNA_(cytidine(32)-2'-O)-methyltransferase_non-catalytic_subunit_TRM732_[Bombyx_mori]
FPKM:1.95 TPM:1.54
2870 A_BomoMG_comp18524_c1_seq1
636bp
 PREDICTED:_tRNA_(cytidine(32)-2'-O)-methyltransferase_non-catalytic_subunit_TRM732_[Bombyx_mori]
FPKM:1.52 TPM:1.20
2871 A_BomoMG_comp18525_c0_seq1
213bp
 PREDICTED:_uncharacterized_protein_LOC105841675_isoform_X2_[Bombyx_mori]
FPKM:2.80 TPM:2.21
2872 A_BomoMG_comp18526_c0_seq1
395bp
FPKM:1.65 TPM:1.30
2873 A_BomoMG_comp185278_c0_seq1
1218bp
 Erg28-domain_containing_protein_[Bombyx_mori]
FPKM:3.01 TPM:2.38
2874 A_BomoMG_comp18528_c0_seq1
246bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_protein_split_ends_[Bombyx_mori]
FPKM:3.01 TPM:2.38
2875 A_BomoMG_comp18529_c0_seq1
227bp
 PREDICTED:_alpha-sarcoglycan_isoform_X1_[Bombyx_mori]
FPKM:4.18 TPM:3.31
2876 A_BomoMG_comp18530_c0_seq1
241bp
FPKM:1.19 TPM:0.94
2877 A_BomoMG_comp18533_c0_seq1
412bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_organic_cation_transporter_protein-like_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016323 C basolateral plasma membrane
GO:0022857 F transmembrane transporter activity
GO:0055085 P transmembrane transport
FPKM:1.68 TPM:1.33
2878 A_BomoMG_comp18533_c1_seq1
281bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_organic_cation_transporter_protein-like_[Bombyx_mori]
FPKM:1.67 TPM:1.32
2879 A_BomoMG_comp18535_c0_seq1
320bp
 PREDICTED:_uncharacterized_protein_LOC101743030_[Bombyx_mori]
FPKM:0.86 TPM:0.68
2880 A_BomoMG_comp185364_c0_seq1
282bp
 PREDICTED:_protein_crumbs_[Bombyx_mori]
GO:0001658 P branching involved in ureteric bud morphogenesis
GO:0001822 P kidney development
GO:0003007 P heart morphogenesis
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005886 C plasma membrane
GO:0007009 P plasma membrane organization
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007157 P heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0021987 P cerebral cortex development
GO:0022008 P neurogenesis
GO:0035329 P hippo signaling
GO:0043931 P ossification involved in bone maturation
GO:0045177 C apical part of cell
GO:0048565 P digestive tract development
GO:0060122 P inner ear receptor cell stereocilium organization
GO:0070062 C extracellular exosome
GO:0072307 P regulation of metanephric nephron tubule epithelial cell differentiation
FPKM:3.59 TPM:2.84
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