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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
271 A_BomoMG_comp116569_c0_seq1
302bp
 hypothetical_protein_MADE_000001022735_[Alteromonas_mediterranea_DE]
FPKM:8.66 TPM:6.84
272 A_BomoMG_comp116571_c0_seq1
1513bp
 PREDICTED:_DDB1-_and_CUL4-associated_factor_12_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0008150 P biological_process
GO:0016567 P protein ubiquitination
GO:0080008 C Cul4-RING E3 ubiquitin ligase complex
FPKM:5.16 TPM:4.08
273 A_BomoMG_comp116671_c0_seq1
746bp
 PREDICTED:_myosuppressin_isoform_X2_[Bombyx_mori]
FPKM:6.94 TPM:5.48
274 A_BomoMG_comp116798_c0_seq1
1092bp
FPKM:5.58 TPM:4.40
275 A_BomoMG_comp116885_c0_seq1
434bp
FPKM:7.39 TPM:5.84
276 A_BomoMG_comp117111_c0_seq1
1362bp
 PREDICTED:_retinol_dehydrogenase_11_[Tribolium_castaneum]
FPKM:4.15 TPM:3.28
277 A_BomoMG_comp117187_c0_seq1
246bp
FPKM:3.01 TPM:2.38
278 A_BomoMG_comp117327_c0_seq1
354bp
FPKM:3.78 TPM:2.98
279 A_BomoMG_comp117330_c0_seq1
337bp
 PREDICTED:_ral_GTPase-activating_protein_subunit_beta-like_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0046982 F protein heterodimerization activity
GO:0051056 P regulation of small GTPase mediated signal transduction
GO:0090630 P activation of GTPase activity
FPKM:8.63 TPM:6.82
280 A_BomoMG_comp117346_c0_seq1
401bp
 hypothetical_protein_[Thermoactinomyces_daqus]
FPKM:7.32 TPM:5.79
281 A_BomoMG_comp117392_c0_seq1
576bp
 PREDICTED:_uncharacterized_protein_LOC106099995_[Papilio_polytes]
GO:0001054 F RNA polymerase I activity
GO:0001055 F RNA polymerase II activity
GO:0001056 F RNA polymerase III activity
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005665 C RNA polymerase II, core complex
GO:0005666 C RNA polymerase III complex
GO:0005730 C nucleolus
GO:0005736 C RNA polymerase I complex
GO:0006351 P transcription, DNA-templated
GO:0006360 P transcription by RNA polymerase I
GO:0006366 P transcription by RNA polymerase II
GO:0006383 P transcription by RNA polymerase III
GO:0034587 P piRNA metabolic process
FPKM:8.49 TPM:6.70
282 A_BomoMG_comp117399_c0_seq1
921bp
 PREDICTED:_apoptosis-inducing_factor_1,_mitochondrial-like_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005739 C mitochondrion
GO:0005758 C mitochondrial intermembrane space
GO:0006915 P apoptotic process
GO:0010623 P programmed cell death involved in cell development
GO:0016491 F oxidoreductase activity
GO:0042775 P mitochondrial ATP synthesis coupled electron transport
GO:0045454 P cell redox homeostasis
GO:0046983 F protein dimerization activity
GO:0050660 F flavin adenine dinucleotide binding
GO:0050832 P defense response to fungus
GO:0055114 P obsolete oxidation-reduction process
FPKM:7.72 TPM:6.10
283 A_BomoMG_comp117408_c0_seq1
212bp
FPKM:9.65 TPM:7.62
284 A_BomoMG_comp117425_c0_seq1
530bp
FPKM:2.52 TPM:1.99
285 A_BomoMG_comp117434_c0_seq1
243bp
FPKM:2.33 TPM:1.84
286 A_BomoMG_comp117453_c0_seq1
314bp
FPKM:1.56 TPM:1.23
287 A_BomoMG_comp117467_c0_seq1
1214bp
FPKM:5.49 TPM:4.34
288 A_BomoMG_comp117554_c0_seq1
2023bp
 PREDICTED:_polyphosphoinositide_phosphatase_isoform_X1_[Papilio_xuthus]
GO:0004438 F phosphatidylinositol-3-phosphatase activity
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0007033 P vacuole organization
GO:0007626 P locomotory behavior
GO:0010008 C endosome membrane
GO:0010976 P positive regulation of neuron projection development
GO:0016020 C membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0031642 P negative regulation of myelination
GO:0032288 P myelin assembly
GO:0034593 F phosphatidylinositol bisphosphate phosphatase activity
GO:0042578 F phosphoric ester hydrolase activity
GO:0043473 P pigmentation
GO:0043812 F phosphatidylinositol-4-phosphate phosphatase activity
GO:0046488 P phosphatidylinositol metabolic process
GO:0048666 P neuron development
GO:0055037 C recycling endosome
FPKM:4.66 TPM:3.69
289 A_BomoMG_comp117582_c0_seq1
497bp
 putative_28S_ribosomal_protein_S16,_mitochondrial_[Papilio_xuthus]
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005739 C mitochondrion
GO:0005763 C mitochondrial small ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0032543 P mitochondrial translation
FPKM:9.24 TPM:7.30
290 A_BomoMG_comp117630_c0_seq1
207bp
 reverse_transcriptase_[Bombyx_mori]
FPKM:3.67 TPM:2.90
291 A_BomoMG_comp117756_c0_seq1
1422bp
 PREDICTED:_probable_cation-transporting_ATPase_13A3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005774 C vacuolar membrane
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006457 P protein folding
GO:0006812 P cation transport
GO:0006874 P cellular calcium ion homeostasis
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016023 C cytoplasmic vesicle
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0019829 F ATPase-coupled cation transmembrane transporter activity
GO:0046872 F metal ion binding
GO:0098655 P cation transmembrane transport
FPKM:5.67 TPM:4.48
292 A_BomoMG_comp117775_c0_seq1
258bp
 D-glycero-D-manno-heptose_7-phosphate_kinase_[Shewanella_fidelis]
FPKM:4.71 TPM:3.72
293 A_BomoMG_comp117924_c0_seq1
1156bp
 PREDICTED:_putative_inorganic_phosphate_cotransporter_[Bombyx_mori]
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006814 P sodium ion transport
GO:0015114 F phosphate ion transmembrane transporter activity
GO:0015293 F symporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035435 P phosphate ion transmembrane transport
GO:0055085 P transmembrane transport
FPKM:4.08 TPM:3.22
294 A_BomoMG_comp117974_c0_seq1
664bp
 PREDICTED:_serine/threonine-protein_kinase_TBK1_[Bombyx_mori]
FPKM:6.03 TPM:4.77
295 A_BomoMG_comp118055_c0_seq1
383bp
FPKM:5.52 TPM:4.36
296 A_BomoMG_comp118105_c0_seq1
413bp
FPKM:6.15 TPM:4.86
297 A_BomoMG_comp118152_c0_seq1
661bp
FPKM:3.25 TPM:2.57
298 A_BomoMG_comp118264_c0_seq1
348bp
FPKM:2.22 TPM:1.76
299 A_BomoMG_comp118304_c0_seq1
491bp
 hypothetical_protein_[Megasphaera_massiliensis]
FPKM:4.11 TPM:3.24
300 A_BomoMG_comp118335_c0_seq1
744bp
FPKM:5.41 TPM:4.27
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