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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
241 A_BomoMG_comp115234_c0_seq1
207bp
FPKM:8.57 TPM:6.77
242 A_BomoMG_comp115243_c0_seq1
1244bp
 PREDICTED:_uncharacterized_protein_LOC101739177_[Bombyx_mori]
FPKM:5.17 TPM:4.09
243 A_BomoMG_comp115281_c0_seq1
516bp
 hypothetical_protein_ND16A_2188_[Thalassotalea_sp._ND16A]
FPKM:5.54 TPM:4.38
244 A_BomoMG_comp115291_c0_seq1
780bp
 PREDICTED:_globin_1_isoform_X1_[Bombyx_mori]
GO:0001666 P response to hypoxia
GO:0004096 F catalase activity
GO:0004601 F peroxidase activity
GO:0005344 F oxygen carrier activity
GO:0005506 F iron ion binding
GO:0005737 C cytoplasm
GO:0006810 P transport
GO:0006979 P response to oxidative stress
GO:0010764 P negative regulation of fibroblast migration
GO:0015671 P oxygen transport
GO:0019395 P fatty acid oxidation
GO:0019825 F oxygen binding
GO:0020037 F heme binding
GO:0032966 P negative regulation of collagen biosynthetic process
GO:0043005 C neuron projection
GO:0043025 C neuronal cell body
GO:0046872 F metal ion binding
GO:0047888 F fatty acid peroxidase activity
GO:0098869 P cellular oxidant detoxification
GO:2000490 P negative regulation of hepatic stellate cell activation
FPKM:8.27 TPM:6.53
245 A_BomoMG_comp115304_c0_seq1
350bp
FPKM:8.81 TPM:6.96
246 A_BomoMG_comp115318_c0_seq1
2075bp
 uridine_5'-monophosphate_synthase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004588 F orotate phosphoribosyltransferase activity
GO:0004590 F orotidine-5'-phosphate decarboxylase activity
GO:0005875 C microtubule associated complex
GO:0006207 P 'de novo' pyrimidine nucleobase biosynthetic process
GO:0006221 P pyrimidine nucleotide biosynthetic process
GO:0008152 P metabolic process
GO:0009116 P nucleoside metabolic process
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016829 F lyase activity
GO:0016831 F carboxy-lyase activity
GO:0044205 P 'de novo' UMP biosynthetic process
FPKM:6.04 TPM:4.77
247 A_BomoMG_comp115330_c0_seq1
286bp
FPKM:9.12 TPM:7.21
248 A_BomoMG_comp115411_c0_seq1
487bp
FPKM:7.65 TPM:6.05
249 A_BomoMG_comp115433_c0_seq1
1544bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_CG7065-like_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:6.46 TPM:5.11
250 A_BomoMG_comp11543_c0_seq1
217bp
FPKM:1.06 TPM:0.84
251 A_BomoMG_comp115537_c0_seq1
904bp
 Uncharacterized_protein_OBRU01_03614_[Operophtera_brumata]
GO:0003674 F molecular_function
GO:0005739 C mitochondrion
GO:0007399 P nervous system development
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:5.88 TPM:4.65
252 A_BomoMG_comp115561_c0_seq1
543bp
FPKM:4.69 TPM:3.71
253 A_BomoMG_comp115567_c0_seq1
347bp
 chorion_class_A_[Bombyx_mori]
FPKM:3.35 TPM:2.65
254 A_BomoMG_comp115593_c0_seq1
526bp
FPKM:8.14 TPM:6.43
255 A_BomoMG_comp115646_c0_seq1
238bp
FPKM:11.88 TPM:9.39
256 A_BomoMG_comp1158737_c0_seq1
259bp
 PREDICTED:_uncharacterized_protein_DDB_G0290301-like_[Bombyx_mori]
FPKM:1.00 TPM:0.79
257 A_BomoMG_comp115882_c0_seq1
390bp
FPKM:5.97 TPM:4.72
258 A_BomoMG_comp115971_c0_seq1
1428bp
 PREDICTED:_probable_ATP-dependent_RNA_helicase_kurz_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0008026 F helicase activity
GO:0016787 F hydrolase activity
GO:0022008 P neurogenesis
GO:0044822 F RNA binding
FPKM:4.26 TPM:3.36
259 A_BomoMG_comp116054_c0_seq1
441bp
FPKM:4.05 TPM:3.20
260 A_BomoMG_comp116055_c0_seq1
1046bp
FPKM:5.70 TPM:4.50
261 A_BomoMG_comp116219_c0_seq1
257bp
FPKM:3.05 TPM:2.41
262 A_BomoMG_comp116238_c0_seq1
346bp
FPKM:11.23 TPM:8.87
263 A_BomoMG_comp116243_c0_seq1
968bp
 PREDICTED:_arf-GAP_with_coiled-coil,_ANK_repeat_and_PH_domain-containing_protein_2_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005768 C endosome
GO:0010008 C endosome membrane
GO:0016020 C membrane
GO:0036010 P protein localization to endosome
GO:0043547 P positive regulation of GTPase activity
GO:0046872 F metal ion binding
GO:1990090 P cellular response to nerve growth factor stimulus
FPKM:4.66 TPM:3.68
264 A_BomoMG_comp116278_c0_seq1
655bp
FPKM:5.99 TPM:4.74
265 A_BomoMG_comp116282_c0_seq1
269bp
FPKM:3.36 TPM:2.66
266 A_BomoMG_comp11628_c0_seq1
310bp
FPKM:0.69 TPM:0.54
267 A_BomoMG_comp116327_c0_seq1
470bp
FPKM:8.06 TPM:6.37
268 A_BomoMG_comp116460_c0_seq1
257bp
FPKM:4.75 TPM:3.75
269 A_BomoMG_comp116467_c0_seq1
1241bp
 PREDICTED:_serine_proteinase-like_protein_isoform_X1_[Bombyx_mori]
GO:0004252 F serine-type endopeptidase activity
GO:0005886 C plasma membrane
GO:0006508 P proteolysis
GO:0007010 P cytoskeleton organization
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016335 P morphogenesis of larval imaginal disc epithelium
GO:0016787 F hydrolase activity
GO:0035220 P wing disc development
GO:0051017 P actin filament bundle assembly
FPKM:4.34 TPM:3.43
270 A_BomoMG_comp116514_c0_seq1
427bp
 PREDICTED:_transcription_initiation_factor_TFIID_subunit_2-like_[Elephantulus_edwardii]
FPKM:6.77 TPM:5.35
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