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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
211 A_BomoMG_comp113261_c0_seq1
426bp
 PREDICTED:_microsomal_triglyceride_transfer_protein_large_subunit-like_[Bombyx_mori]
FPKM:7.47 TPM:5.90
212 A_BomoMG_comp113316_c0_seq1
2564bp
 PREDICTED:_rab11_family-interacting_protein_2_[Papilio_machaon]
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0017137 F small GTPase binding
GO:0030670 C phagocytic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0043231 C intracellular membrane-bounded organelle
GO:0045055 P regulated exocytosis
GO:0055037 C recycling endosome
GO:0070164 P negative regulation of adiponectin secretion
FPKM:6.26 TPM:4.95
213 A_BomoMG_comp113332_c0_seq1
1022bp
 PREDICTED:_dephospho-CoA_kinase_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0004140 F dephospho-CoA kinase activity
GO:0005524 F ATP binding
GO:0015937 P coenzyme A biosynthetic process
GO:0016310 P phosphorylation
FPKM:7.59 TPM:6.00
214 A_BomoMG_comp113339_c0_seq1
921bp
FPKM:5.56 TPM:4.40
215 A_BomoMG_comp113380_c0_seq1
262bp
 PREDICTED:_uncharacterized_protein_LOC106136884_[Amyelois_transitella]
FPKM:13.95 TPM:11.02
216 A_BomoMG_comp113401_c0_seq1
1014bp
FPKM:5.86 TPM:4.63
217 A_BomoMG_comp113634_c0_seq1
764bp
 PREDICTED:_uncharacterized_protein_LOC103311807,_partial_[Acyrthosiphon_pisum]
FPKM:5.84 TPM:4.61
218 A_BomoMG_comp113654_c0_seq1
485bp
 PREDICTED:_transcription_elongation_factor_1_homolog_[Plutella_xylostella]
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
FPKM:7.04 TPM:5.56
219 A_BomoMG_comp113822_c0_seq1
1305bp
 PREDICTED:_general_transcription_factor_IIH_subunit_2_[Amyelois_transitella]
GO:0000439 C transcription factor TFIIH core complex
GO:0003674 F molecular_function
GO:0004672 F protein kinase activity
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005675 C transcription factor TFIIH holo complex
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006468 P protein phosphorylation
GO:0006974 P cellular response to DNA damage stimulus
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0008353 F RNA polymerase II CTD heptapeptide repeat kinase activity
GO:0046872 F metal ion binding
FPKM:7.40 TPM:5.85
220 A_BomoMG_comp113850_c0_seq1
399bp
FPKM:10.04 TPM:7.93
221 A_BomoMG_comp113886_c0_seq1
968bp
FPKM:5.06 TPM:4.00
222 A_BomoMG_comp113920_c0_seq1
283bp
 PREDICTED:_fatty_acid_synthase-like_[Bombyx_mori]
FPKM:6.31 TPM:4.98
223 A_BomoMG_comp114002_c0_seq1
555bp
 reverse_transcriptase,_partial_[Bombyx_mandarina]
FPKM:7.56 TPM:5.97
224 A_BomoMG_comp114038_c0_seq1
448bp
FPKM:4.32 TPM:3.42
225 A_BomoMG_comp114204_c0_seq1
341bp
 anthranilate/para-aminobenzoate_synthases_component_I_[uncultured_Verrucomicrobiales_bacterium_HF0200_39L05]
FPKM:2.50 TPM:1.97
226 A_BomoMG_comp114287_c0_seq1
256bp
FPKM:3.77 TPM:2.98
227 A_BomoMG_comp1143065_c0_seq1
220bp
 PREDICTED:_rho_GTPase-activating_protein_100F_isoform_X2_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0007165 P signal transduction
GO:0007266 P Rho protein signal transduction
GO:0043087 P regulation of GTPase activity
GO:0045467 P R7 cell development
GO:0048786 C presynaptic active zone
GO:0048789 P cytoskeletal matrix organization at active zone
GO:0048790 P maintenance of presynaptic active zone structure
GO:0048846 P axon extension involved in axon guidance
GO:0090630 P activation of GTPase activity
GO:0097479 P synaptic vesicle localization
FPKM:1.02 TPM:0.80
228 A_BomoMG_comp114469_c0_seq1
248bp
 hypothetical_protein_M407DRAFT_193093_[Tulasnella_calospora_MUT_4182]
FPKM:7.02 TPM:5.55
229 A_BomoMG_comp114544_c0_seq1
1608bp
 PREDICTED:_FERM,_RhoGEF_and_pleckstrin_domain-containing_protein_1-like_isoform_X2_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007275 P multicellular organism development
GO:0007416 P synapse assembly
GO:0008092 F cytoskeletal protein binding
GO:0010923 P negative regulation of phosphatase activity
GO:0016020 C membrane
GO:0019898 C extrinsic component of membrane
GO:0030054 C cell junction
GO:0030175 C filopodium
GO:0030425 C dendrite
GO:0030676 F guanyl-nucleotide exchange factor activity
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0035023 P regulation of Rho protein signal transduction
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0043197 C dendritic spine
GO:0043547 P positive regulation of GTPase activity
GO:0045202 C synapse
GO:0048813 P dendrite morphogenesis
FPKM:4.16 TPM:3.29
230 A_BomoMG_comp114549_c0_seq1
740bp
 putative_mitochondrial_ribosomal_protein_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005739 C mitochondrion
GO:0005763 C mitochondrial small ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0031965 C nuclear membrane
GO:0044822 F RNA binding
GO:0045111 C intermediate filament cytoskeleton
FPKM:8.26 TPM:6.53
231 A_BomoMG_comp114713_c0_seq1
1644bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_lethal(2)neighbour_of_tid_protein_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0007275 P multicellular organism development
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016758 F hexosyltransferase activity
FPKM:4.48 TPM:3.54
232 A_BomoMG_comp114934_c0_seq1
349bp
FPKM:3.50 TPM:2.77
233 A_BomoMG_comp114989_c0_seq1
2142bp
 PREDICTED:_protein-methionine_sulfoxide_oxidase_mical3a_isoform_X1_[Bombyx_mori]
GO:0001725 C stress fiber
GO:0003779 F actin binding
GO:0003785 F actin monomer binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005903 C brush border
GO:0005925 C focal adhesion
GO:0008270 F zinc ion binding
GO:0015629 C actin cytoskeleton
GO:0030054 C cell junction
GO:0030835 P negative regulation of actin filament depolymerization
GO:0031529 P ruffle organization
GO:0032154 C cleavage furrow
GO:0046872 F metal ion binding
GO:0051015 F actin filament binding
GO:0051017 P actin filament bundle assembly
FPKM:5.50 TPM:4.35
234 A_BomoMG_comp115052_c0_seq1
207bp
 penicillin-binding_protein_2_[Syntrophomonas_wolfei]
FPKM:2.45 TPM:1.93
235 A_BomoMG_comp115053_c0_seq1
1142bp
 PREDICTED:_SAP30-binding_protein_[Amyelois_transitella]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0010942 P positive regulation of cell death
GO:0045111 C intermediate filament cytoskeleton
FPKM:4.81 TPM:3.80
236 A_BomoMG_comp11507_c0_seq1
224bp
FPKM:0.97 TPM:0.76
237 A_BomoMG_comp115152_c0_seq1
254bp
FPKM:9.77 TPM:7.72
238 A_BomoMG_comp115206_c0_seq1
1201bp
 PREDICTED:_nuclear_pore_complex_protein_Nup205_[Amyelois_transitella]
GO:0000059 P obsolete protein import into nucleus, docking
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005643 C nuclear pore
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006406 P mRNA export from nucleus
GO:0006409 P tRNA export from nucleus
GO:0006810 P transport
GO:0006913 P nucleocytoplasmic transport
GO:0007077 P mitotic nuclear membrane disassembly
GO:0010827 P regulation of glucose transmembrane transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016032 P viral process
GO:0016925 P protein sumoylation
GO:0017056 F structural constituent of nuclear pore
GO:0019083 P viral transcription
GO:0031047 P gene silencing by RNA
GO:0031965 C nuclear membrane
GO:0034399 C nuclear periphery
GO:0044611 C nuclear pore inner ring
GO:0051028 P mRNA transport
GO:0051292 P nuclear pore complex assembly
GO:0075733 P intracellular transport of virus
GO:1900034 P regulation of cellular response to heat
FPKM:4.79 TPM:3.78
239 A_BomoMG_comp115221_c0_seq1
214bp
FPKM:7.17 TPM:5.67
240 A_BomoMG_comp115223_c0_seq1
645bp
FPKM:6.41 TPM:5.07
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