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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
181 A_BomoMG_comp111764_c0_seq1
254bp
 PREDICTED:_aquaporin_isoform_X2_[Bombyx_mori]
FPKM:11.86 TPM:9.37
182 A_BomoMG_comp111766_c0_seq1
1210bp
 PREDICTED:_uncharacterized_protein_LOC105842396_[Bombyx_mori]
FPKM:4.33 TPM:3.42
183 A_BomoMG_comp111778_c0_seq1
1114bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_regulator_of_microtubule_dynamics_protein_1-like_[Amyelois_transitella]
GO:0000922 C spindle pole
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
FPKM:7.41 TPM:5.85
184 A_BomoMG_comp111782_c0_seq1
1732bp
FPKM:6.60 TPM:5.22
185 A_BomoMG_comp111812_c0_seq1
309bp
 hypothetical_protein_[Pseudomonas_brassicacearum]
FPKM:4.14 TPM:3.27
186 A_BomoMG_comp111822_c0_seq1
256bp
FPKM:8.90 TPM:7.03
187 A_BomoMG_comp111847_c0_seq1
269bp
 Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_[Tribolium_castaneum]
FPKM:4.59 TPM:3.63
188 A_BomoMG_comp111917_c0_seq1
379bp
FPKM:2.09 TPM:1.65
189 A_BomoMG_comp111922_c0_seq1
491bp
 PREDICTED:_dedicator_of_cytokinesis_protein_7_[Bombyx_mori]
GO:0000226 P microtubule cytoskeleton organization
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005622 C intracellular anatomical structure
GO:0005925 C focal adhesion
GO:0007264 P small GTPase mediated signal transduction
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007409 P axonogenesis
GO:0008180 C COP9 signalosome
GO:0022027 P interkinetic nuclear migration
GO:0030154 P cell differentiation
GO:0030424 C axon
GO:0030426 C growth cone
GO:0031175 P neuron projection development
GO:0033138 P positive regulation of peptidyl-serine phosphorylation
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0045178 C basal part of cell
GO:0045200 P establishment of neuroblast polarity
GO:0048365 F small GTPase binding
GO:0050767 P regulation of neurogenesis
GO:0090630 P activation of GTPase activity
GO:1904754 P positive regulation of vascular associated smooth muscle cell migration
FPKM:6.37 TPM:5.04
190 A_BomoMG_comp111927_c0_seq1
1197bp
 PREDICTED:_tRNA_methyltransferase_10_homolog_A_[Bombyx_mori]
GO:0000049 F tRNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0030488 P tRNA methylation
GO:0032259 P methylation
GO:0044822 F RNA binding
GO:0070062 C extracellular exosome
FPKM:4.95 TPM:3.91
191 A_BomoMG_comp111941_c0_seq1
404bp
FPKM:10.28 TPM:8.12
192 A_BomoMG_comp112002_c0_seq1
1576bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_mediator_of_RNA_polymerase_II_transcription_subunit_24_[Bombyx_mori]
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
FPKM:4.65 TPM:3.67
193 A_BomoMG_comp112023_c0_seq1
397bp
FPKM:1.64 TPM:1.29
194 A_BomoMG_comp112049_c0_seq1
2705bp
 juvenile_hormone_epoxide_hydrolase-like_protein_1_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0019439 P aromatic compound catabolic process
GO:0031090 C organelle membrane
GO:0033961 F cis-stilbene-oxide hydrolase activity
GO:0043231 C intracellular membrane-bounded organelle
FPKM:4.99 TPM:3.94
195 A_BomoMG_comp112105_c0_seq1
243bp
FPKM:2.72 TPM:2.15
196 A_BomoMG_comp112112_c0_seq1
511bp
FPKM:6.33 TPM:5.00
197 A_BomoMG_comp112186_c0_seq1
265bp
 PREDICTED:_apoptosis-inducing_factor_1,_mitochondrial-like_[Bombyx_mori]
GO:0002931 P response to ischemia
GO:0003677 F DNA binding
GO:0004174 F electron-transferring-flavoprotein dehydrogenase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005743 C mitochondrial inner membrane
GO:0005758 C mitochondrial intermembrane space
GO:0005829 C cytosol
GO:0006915 P apoptotic process
GO:0006919 P activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0006979 P response to oxidative stress
GO:0008637 P apoptotic mitochondrial changes
GO:0009636 P response to toxic substance
GO:0010942 P positive regulation of cell death
GO:0016020 C membrane
GO:0016174 F NAD(P)H oxidase H2O2-forming activity
GO:0016491 F oxidoreductase activity
GO:0016651 F oxidoreductase activity, acting on NAD(P)H
GO:0030182 P neuron differentiation
GO:0032981 P mitochondrial respiratory chain complex I assembly
GO:0043065 P positive regulation of apoptotic process
GO:0043525 P positive regulation of neuron apoptotic process
GO:0045454 P cell redox homeostasis
GO:0046983 F protein dimerization activity
GO:0048471 C perinuclear region of cytoplasm
GO:0050660 F flavin adenine dinucleotide binding
GO:0051402 P neuron apoptotic process
GO:0055114 P obsolete oxidation-reduction process
GO:0070059 P intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress
GO:0070301 P cellular response to hydrogen peroxide
GO:0071392 P cellular response to estradiol stimulus
GO:0071732 P cellular response to nitric oxide
GO:0071949 F FAD binding
GO:0090650 P cellular response to oxygen-glucose deprivation
GO:1902065 P response to L-glutamate
GO:1902510 P regulation of apoptotic DNA fragmentation
GO:1904045 P cellular response to aldosterone
FPKM:12.65 TPM:9.99
198 A_BomoMG_comp112508_c0_seq1
1300bp
 PREDICTED:_uncharacterized_protein_LOC101740032_isoform_X2_[Bombyx_mori]
FPKM:1.38 TPM:1.09
199 A_BomoMG_comp112646_c0_seq1
728bp
 putative_uncharacterized_protein_[Clostridium_sp._CAG:354]
FPKM:4.35 TPM:3.43
200 A_BomoMG_comp112671_c0_seq1
770bp
 hypothetical_protein_KGM_15428_[Danaus_plexippus]
GO:0004252 F serine-type endopeptidase activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006465 P signal peptide processing
GO:0006508 P proteolysis
GO:0006627 P protein processing involved in protein targeting to mitochondrion
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0033108 P mitochondrial respiratory chain complex assembly
GO:0042720 C mitochondrial inner membrane peptidase complex
FPKM:7.51 TPM:5.93
201 A_BomoMG_comp112755_c0_seq1
246bp
FPKM:1.88 TPM:1.49
202 A_BomoMG_comp112770_c0_seq1
737bp
FPKM:7.05 TPM:5.57
203 A_BomoMG_comp112771_c0_seq1
774bp
FPKM:4.74 TPM:3.74
204 A_BomoMG_comp112881_c0_seq1
619bp
FPKM:6.30 TPM:4.97
205 A_BomoMG_comp112885_c0_seq1
301bp
FPKM:4.36 TPM:3.44
206 A_BomoMG_comp112917_c0_seq1
582bp
 DNA-directed_RNA_polymerase_subunit_[Operophtera_brumata]
GO:0001193 P maintenance of transcriptional fidelity during DNA-templated transcription elongation from RNA polymerase II promoter
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005634 C nucleus
GO:0005665 C RNA polymerase II, core complex
GO:0005730 C nucleolus
GO:0006283 P transcription-coupled nucleotide-excision repair
GO:0006351 P transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0007067 P mitotic cell cycle
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
GO:0008270 F zinc ion binding
GO:0022008 P neurogenesis
GO:0046872 F metal ion binding
FPKM:8.97 TPM:7.08
207 A_BomoMG_comp112951_c0_seq1
653bp
FPKM:6.61 TPM:5.22
208 A_BomoMG_comp112967_c0_seq1
296bp
FPKM:3.75 TPM:2.97
209 A_BomoMG_comp113132_c0_seq1
268bp
 serine_protease_inhibitor_33_precursor_[Bombyx_mori]
FPKM:2.78 TPM:2.19
210 A_BomoMG_comp113204_c0_seq1
1082bp
 PREDICTED:_39S_ribosomal_protein_L19,_mitochondrial_[Plutella_xylostella]
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005739 C mitochondrion
GO:0005762 C mitochondrial large ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0019233 P sensory perception of pain
GO:0030529 C ribonucleoprotein complex
FPKM:7.62 TPM:6.02
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