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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1921 A_BomoMG_comp17487_c0_seq1
336bp
 unnamed_protein_product_[Coffea_canephora]
FPKM:3.94 TPM:3.11
1922 A_BomoMG_comp17488_c0_seq1
360bp
FPKM:3.77 TPM:2.98
1923 A_BomoMG_comp17489_c0_seq1
503bp
FPKM:2.51 TPM:1.98
1924 A_BomoMG_comp174906_c0_seq1
744bp
 PREDICTED:_enhancer_of_mRNA-decapping_protein_3_[Amyelois_transitella]
GO:0000932 C P-body
GO:0003723 F RNA binding
GO:0005737 C cytoplasm
FPKM:3.36 TPM:2.65
1925 A_BomoMG_comp17493_c0_seq1
276bp
 hypothetical_protein_Z043_100659_[Scleropages_formosus]
FPKM:1.45 TPM:1.14
1926 A_BomoMG_comp17494_c0_seq1
318bp
 PREDICTED:_sodium_channel_protein_para_isoform_X1_[Amyelois_transitella]
GO:0001518 C voltage-gated sodium channel complex
GO:0001666 P response to hypoxia
GO:0005216 F ion channel activity
GO:0005244 F voltage-gated ion channel activity
GO:0005248 F voltage-gated sodium channel activity
GO:0005272 F sodium channel activity
GO:0005509 F calcium ion binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006814 P sodium ion transport
GO:0007268 P chemical synaptic transmission
GO:0007638 P mechanosensory behavior
GO:0009612 P response to mechanical stimulus
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019228 P neuronal action potential
GO:0034220 P ion transmembrane transport
GO:0034765 P regulation of ion transmembrane transport
GO:0035725 P sodium ion transmembrane transport
GO:0042493 P response to xenobiotic stimulus
GO:0045433 P male courtship behavior, veined wing generated song production
GO:0046680 P response to DDT
GO:0046684 P response to pyrethroid
GO:0055085 P transmembrane transport
GO:0060078 P regulation of postsynaptic membrane potential
GO:0086010 P membrane depolarization during action potential
FPKM:3.27 TPM:2.58
1927 A_BomoMG_comp17494_c1_seq1
582bp
 para_sodium_channel_alpha_subunit_[Bombyx_mori]
GO:0001518 C voltage-gated sodium channel complex
GO:0001666 P response to hypoxia
GO:0005216 F ion channel activity
GO:0005244 F voltage-gated ion channel activity
GO:0005248 F voltage-gated sodium channel activity
GO:0005272 F sodium channel activity
GO:0005509 F calcium ion binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006814 P sodium ion transport
GO:0007268 P chemical synaptic transmission
GO:0007638 P mechanosensory behavior
GO:0009612 P response to mechanical stimulus
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019228 P neuronal action potential
GO:0034220 P ion transmembrane transport
GO:0034765 P regulation of ion transmembrane transport
GO:0035725 P sodium ion transmembrane transport
GO:0042493 P response to xenobiotic stimulus
GO:0045433 P male courtship behavior, veined wing generated song production
GO:0046680 P response to DDT
GO:0046684 P response to pyrethroid
GO:0055085 P transmembrane transport
GO:0060078 P regulation of postsynaptic membrane potential
GO:0086010 P membrane depolarization during action potential
FPKM:2.22 TPM:1.75
1928 A_BomoMG_comp17495_c0_seq1
410bp
 PREDICTED:_uncharacterized_protein_LOC105841809_[Bombyx_mori]
FPKM:2.69 TPM:2.12
1929 A_BomoMG_comp17496_c0_seq1
593bp
FPKM:2.91 TPM:2.30
1930 A_BomoMG_comp17498_c0_seq1
224bp
FPKM:5.31 TPM:4.19
1931 A_BomoMG_comp17499_c0_seq1
352bp
FPKM:3.62 TPM:2.86
1932 A_BomoMG_comp17500_c0_seq1
477bp
 PREDICTED:_putative_RNA_exonuclease_NEF-sp_[Amyelois_transitella]
FPKM:2.82 TPM:2.22
1933 A_BomoMG_comp17501_c0_seq1
204bp
FPKM:8.99 TPM:7.10
1934 A_BomoMG_comp175021_c0_seq1
368bp
FPKM:4.88 TPM:3.86
1935 A_BomoMG_comp17502_c0_seq1
533bp
 PREDICTED:_methionine_synthase_reductase-like_isoform_X1_[Amyelois_transitella]
GO:0000096 P sulfur amino acid metabolic process
GO:0003958 F NADPH-hemoprotein reductase activity
GO:0005506 F iron ion binding
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006306 P DNA methylation
GO:0006555 P methionine metabolic process
GO:0008652 P cellular amino acid biosynthetic process
GO:0009086 P methionine biosynthetic process
GO:0009235 P cobalamin metabolic process
GO:0010181 F FMN binding
GO:0016491 F oxidoreductase activity
GO:0016723 F oxidoreductase activity, acting on metal ions, NAD or NADP as acceptor
GO:0030586 F [methionine synthase] reductase activity
GO:0032259 P methylation
GO:0033353 P S-adenosylmethionine cycle
GO:0043418 P homocysteine catabolic process
GO:0045111 C intermediate filament cytoskeleton
GO:0046655 P folic acid metabolic process
GO:0050444 F obsolete aquacobalamin reductase (NADPH) activity
GO:0050660 F flavin adenine dinucleotide binding
GO:0050661 F NADP binding
GO:0055114 P obsolete oxidation-reduction process
GO:0070402 F NADPH binding
GO:0071949 F FAD binding
GO:1904042 P negative regulation of cystathionine beta-synthase activity
FPKM:2.98 TPM:2.36
1936 A_BomoMG_comp17503_c0_seq1
220bp
FPKM:3.05 TPM:2.41
1937 A_BomoMG_comp175043_c0_seq1
1204bp
 PREDICTED:_dynactin_subunit_4_[Amyelois_transitella]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005868 C cytoplasmic dynein complex
GO:0005869 C dynactin complex
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0007097 P nuclear migration
GO:0019886 P antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0047485 F protein N-terminus binding
FPKM:3.51 TPM:2.77
1938 A_BomoMG_comp17504_c0_seq1
449bp
FPKM:3.08 TPM:2.43
1939 A_BomoMG_comp175106_c0_seq1
376bp
FPKM:0.00 TPM:0.00
1940 A_BomoMG_comp175106_c0_seq2
376bp
FPKM:2.11 TPM:1.67
1941 A_BomoMG_comp17511_c0_seq1
537bp
FPKM:2.76 TPM:2.18
1942 A_BomoMG_comp17512_c0_seq1
227bp
FPKM:3.25 TPM:2.57
1943 A_BomoMG_comp17514_c0_seq1
626bp
FPKM:2.48 TPM:1.96
1944 A_BomoMG_comp17515_c0_seq1
481bp
FPKM:1.89 TPM:1.49
1945 A_BomoMG_comp17516_c0_seq1
775bp
FPKM:3.01 TPM:2.38
1946 A_BomoMG_comp17518_c0_seq1
1262bp
 hypothetical_protein_RF55_15095_[Lasius_niger]
FPKM:2.06 TPM:1.63
1947 A_BomoMG_comp17519_c0_seq1
1744bp
 Protein_disabled_[Papilio_xuthus]
GO:0005118 F sevenless binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007275 P multicellular organism development
GO:0007349 P cellularization
GO:0007391 P dorsal closure
GO:0007399 P nervous system development
GO:0008045 P motor neuron axon guidance
GO:0017124 F SH3 domain binding
GO:0022008 P neurogenesis
GO:0030154 P cell differentiation
GO:0030424 C axon
GO:0032502 P developmental process
GO:0042051 P compound eye photoreceptor development
GO:0042169 F SH2 domain binding
GO:0045500 P sevenless signaling pathway
GO:0048488 P synaptic vesicle endocytosis
GO:0072583 P clathrin-dependent endocytosis
FPKM:2.11 TPM:1.67
1948 A_BomoMG_comp17520_c0_seq1
847bp
FPKM:2.28 TPM:1.80
1949 A_BomoMG_comp17522_c0_seq1
267bp
 PREDICTED:_UPF0545_protein_C22orf39_homolog_isoform_X1_[Bombyx_mori]
FPKM:3.73 TPM:2.95
1950 A_BomoMG_comp17523_c0_seq1
270bp
FPKM:4.25 TPM:3.36
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