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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1681 A_BomoMG_comp17253_c0_seq1
271bp
FPKM:2.41 TPM:1.90
1682 A_BomoMG_comp17254_c0_seq1
641bp
FPKM:2.03 TPM:1.60
1683 A_BomoMG_comp17255_c0_seq1
364bp
 PREDICTED:_neurofibromin_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0043547 P positive regulation of GTPase activity
GO:0048147 P negative regulation of fibroblast proliferation
FPKM:2.40 TPM:1.90
1684 A_BomoMG_comp17256_c0_seq1
467bp
 PREDICTED:_centrosomal_protein_of_135_kDa_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005814 C centriole
GO:0005856 C cytoskeleton
GO:0007099 P centriole replication
GO:0010457 P centriole-centriole cohesion
FPKM:1.86 TPM:1.47
1685 A_BomoMG_comp17257_c0_seq1
529bp
FPKM:2.24 TPM:1.77
1686 A_BomoMG_comp17259_c0_seq1
255bp
 PREDICTED:_intraflagellar_transport_protein_122_homolog_[Bombyx_mori]
FPKM:0.77 TPM:0.61
1687 A_BomoMG_comp17259_c0_seq2
248bp
FPKM:2.50 TPM:1.97
1688 A_BomoMG_comp17260_c0_seq1
296bp
FPKM:2.75 TPM:2.18
1689 A_BomoMG_comp17260_c1_seq1
366bp
FPKM:3.06 TPM:2.42
1690 A_BomoMG_comp172615_c0_seq1
1548bp
 PREDICTED:_uncharacterized_protein_LOC106718589_[Papilio_machaon]
FPKM:3.28 TPM:2.59
1691 A_BomoMG_comp17261_c0_seq1
501bp
 PREDICTED:_uncharacterized_protein_LOC105841369,_partial_[Bombyx_mori]
FPKM:2.83 TPM:2.24
1692 A_BomoMG_comp17262_c0_seq1
424bp
 hypothetical_protein_WH47_02371_[Habropoda_laboriosa]
FPKM:2.42 TPM:1.91
1693 A_BomoMG_comp17263_c0_seq1
240bp
 PREDICTED:_uncharacterized_protein_LOC101745877_isoform_X2_[Bombyx_mori]
FPKM:4.01 TPM:3.17
1694 A_BomoMG_comp17263_c1_seq1
419bp
 PREDICTED:_uncharacterized_protein_LOC101745877_isoform_X3_[Bombyx_mori]
FPKM:0.68 TPM:0.54
1695 A_BomoMG_comp17264_c0_seq1
429bp
 PREDICTED:_uncharacterized_protein_LOC105842323_[Bombyx_mori]
FPKM:2.64 TPM:2.08
1696 A_BomoMG_comp17265_c0_seq1
1348bp
 PREDICTED:_sphingomyelin_phosphodiesterase_4_[Amyelois_transitella]
GO:0000139 C Golgi membrane
GO:0004767 F sphingomyelin phosphodiesterase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0050290 F sphingomyelin phosphodiesterase D activity
FPKM:1.79 TPM:1.42
1697 A_BomoMG_comp17266_c0_seq1
708bp
 putative_adaptor_protein_enigma_[Operophtera_brumata]
FPKM:1.72 TPM:1.36
1698 A_BomoMG_comp17267_c0_seq1
287bp
FPKM:2.94 TPM:2.33
1699 A_BomoMG_comp172682_c0_seq1
913bp
FPKM:3.15 TPM:2.49
1700 A_BomoMG_comp17269_c0_seq1
796bp
 Retrovirus-related_Pol_polyprotein_from_transposon_TNT_1-94_[Papilio_machaon]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:1.89 TPM:1.49
1701 A_BomoMG_comp172711_c0_seq1
852bp
 PREDICTED:_kinesin-like_protein_KIF21A_isoform_X5_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005871 C kinesin complex
GO:0005874 C microtubule
GO:0007018 P microtubule-based movement
GO:0008017 F microtubule binding
GO:0008152 P metabolic process
GO:0016887 F ATP hydrolysis activity
FPKM:3.63 TPM:2.87
1702 A_BomoMG_comp172712_c0_seq1
290bp
FPKM:3.65 TPM:2.89
1703 A_BomoMG_comp17271_c0_seq1
244bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:3.85 TPM:3.04
1704 A_BomoMG_comp17272_c0_seq1
265bp
FPKM:1.90 TPM:1.50
1705 A_BomoMG_comp17272_c1_seq1
235bp
FPKM:2.54 TPM:2.01
1706 A_BomoMG_comp17273_c0_seq1
257bp
FPKM:1.70 TPM:1.34
1707 A_BomoMG_comp17274_c0_seq1
789bp
FPKM:1.56 TPM:1.23
1708 A_BomoMG_comp17278_c0_seq1
465bp
FPKM:1.75 TPM:1.39
1709 A_BomoMG_comp172799_c0_seq1
340bp
FPKM:4.82 TPM:3.81
1710 A_BomoMG_comp17279_c0_seq1
511bp
 PREDICTED:_exportin-4-like_[Bombyx_mori]
GO:0005049 F nuclear export signal receptor activity
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0005737 C cytoplasm
GO:0006611 P protein export from nucleus
GO:0006810 P transport
GO:0008536 F small GTPase binding
GO:0015031 P protein transport
FPKM:1.74 TPM:1.37
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