SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp17269_c0_seq1
Scaffold_idBomo_Chr18
NCBI non-redundant
(nr)		Retrovirus-related_Pol_polyprotein_from_transposon_TNT_1-94_[Papilio_machaon]
Ontology
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:1.89 TPM:1.49
ORF EntryO_BomoMG130_internal:A_BomoMG_comp17269_c0_seq1
Sequence
(Nucleotide)
GTTTGCACGATTTAAAAGTGAGGTGGAAAATGAGTTGGAAATGAAAATCAAAATGTTAAG
AAGTGACAATGGAAAAGAATATTGTAATAAAGATTTCTCTGATTTTCTAGCAGCTTCCGG
CATCAAGCACCAGACCAGCGCTCCCTACACGCCTGAACAAAATGGACTTTCTGAAAAAAT
GAACCGTAGTCTGGTGGAGCGAGCAAAATGCATGCTGTTTGAGGCAAAACTGCAGAAAAT
ATATTGGGCCGAAGCAGTAGCTACTGCTGCTTATATCATTAATAGATCTCCATCACGAGT
TCTGGCTGAGGTAACACCTTATGAAAAATGGACTAGTAAGAAACCAAACATTTCACACTT
AAGGATTTTTGGCTCTAAGGCCATGGTACATGTTCCGAAGCAAAATCGTTTGAAATGGGA
TCGTAAATCACAAGAATTGGTTTTCGTAGGTTACTGTGAGAACACAAAGGGGTACAGATT
AATTGATCCTAATAGTAAGAAGGCAGTGATTAGCAGGGATGTGATATTTATCGAAAGTCC
CATAGATAATGTCACTCAGAAACCTAGCCTAAAGCCTCAGCTTATTACTTTACCTCTCAG
TTCAAGTTTAAGTCGCGCACAAAAAAGCAATGAAATATCTTTGATGCCGGTTGATGATAG
CTCTCAAACAGACACTGAAAATGTCACATCAACACCTTCAAGTACTGATACTTCTTTTGA
CAGCTGTGTGGTGAACAGAAATGATGATGAAACTTATTATCCCAGCTCAAGTGACAGTGA
TAACAGTTTCGGGAGG
(796 bp)

- SilkBase 1999-2023 -