SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search Assembled RNA-Seq

previous next from show/43914
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1471 A_BomoMG_comp17041_c0_seq1
334bp
 PREDICTED:_probable_G-protein_coupled_receptor_158_isoform_X1_[Bombyx_mori]
FPKM:2.79 TPM:2.20
1472 A_BomoMG_comp17042_c0_seq1
340bp
FPKM:2.70 TPM:2.13
1473 A_BomoMG_comp17043_c0_seq1
649bp
FPKM:2.07 TPM:1.64
1474 A_BomoMG_comp17044_c0_seq1
704bp
 PREDICTED:_facilitated_trehalose_transporter_Tret1-like_isoform_X2_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015574 F trehalose transmembrane transporter activity
GO:0015767 P lactose transport
GO:0015768 P maltose transport
GO:0015770 P sucrose transport
GO:0015771 P trehalose transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
FPKM:2.53 TPM:2.00
1475 A_BomoMG_comp17045_c0_seq1
212bp
FPKM:0.00 TPM:0.00
1476 A_BomoMG_comp17048_c0_seq1
273bp
 Uncharacterized_protein_OBRU01_15848,_partial_[Operophtera_brumata]
FPKM:2.67 TPM:2.11
1477 A_BomoMG_comp17049_c0_seq1
850bp
 Uncharacterized_protein_OBRU01_10722_[Operophtera_brumata]
FPKM:2.43 TPM:1.92
1478 A_BomoMG_comp17050_c0_seq1
503bp
FPKM:1.67 TPM:1.32
1479 A_BomoMG_comp17052_c0_seq1
624bp
 PREDICTED:_uncharacterized_protein_LOC105397376,_partial_[Plutella_xylostella]
FPKM:1.37 TPM:1.08
1480 A_BomoMG_comp17052_c0_seq2
598bp
 PREDICTED:_uncharacterized_protein_LOC105397376,_partial_[Plutella_xylostella]
FPKM:1.02 TPM:0.81
1481 A_BomoMG_comp17053_c0_seq1
323bp
FPKM:3.39 TPM:2.68
1482 A_BomoMG_comp170554_c0_seq1
279bp
FPKM:4.24 TPM:3.35
1483 A_BomoMG_comp17055_c0_seq1
346bp
 PREDICTED:_uncharacterized_protein_LOC106721395_[Papilio_machaon]
FPKM:1.68 TPM:1.33
1484 A_BomoMG_comp17056_c0_seq1
267bp
 PREDICTED:_zinc_finger_protein_773-like_[Bombyx_mori]
FPKM:2.80 TPM:2.21
1485 A_BomoMG_comp17056_c1_seq1
573bp
 PREDICTED:_zinc_finger_protein_773-like_[Bombyx_mori]
FPKM:1.74 TPM:1.38
1486 A_BomoMG_comp17057_c0_seq1
287bp
 PREDICTED:_beta-1,3-galactosyltransferase_2_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005794 C Golgi apparatus
GO:0006486 P protein glycosylation
GO:0008378 F galactosyltransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
FPKM:3.42 TPM:2.70
1487 A_BomoMG_comp17058_c0_seq1
217bp
FPKM:0.53 TPM:0.42
1488 A_BomoMG_comp17059_c0_seq1
471bp
 PREDICTED:_zinc_finger_protein_91-like_[Bombyx_mori]
FPKM:2.64 TPM:2.08
1489 A_BomoMG_comp17060_c0_seq1
365bp
 PREDICTED:_glucose_dehydrogenase_[FAD,_quinone]-like_isoform_X2_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0016491 F oxidoreductase activity
GO:0016614 F oxidoreductase activity, acting on CH-OH group of donors
GO:0050660 F flavin adenine dinucleotide binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:2.39 TPM:1.89
1490 A_BomoMG_comp17062_c0_seq1
1079bp
FPKM:1.95 TPM:1.54
1491 A_BomoMG_comp17065_c0_seq1
400bp
 serine_protease_HP21_precursor_[Bombyx_mori]
GO:0004252 F serine-type endopeptidase activity
GO:0005576 C extracellular region
GO:0006508 P proteolysis
GO:0007275 P multicellular organism development
GO:0007311 P maternal specification of dorsal/ventral axis, oocyte, germ-line encoded
GO:0008063 P Toll signaling pathway
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0009950 P dorsal/ventral axis specification
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
FPKM:2.79 TPM:2.21
1492 A_BomoMG_comp17065_c1_seq1
919bp
 serine_protease_HP21_precursor_[Bombyx_mori]
GO:0004252 F serine-type endopeptidase activity
GO:0005576 C extracellular region
GO:0006508 P proteolysis
GO:0007275 P multicellular organism development
GO:0007311 P maternal specification of dorsal/ventral axis, oocyte, germ-line encoded
GO:0008063 P Toll signaling pathway
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0009950 P dorsal/ventral axis specification
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
FPKM:2.12 TPM:1.67
1493 A_BomoMG_comp17066_c0_seq1
286bp
 hypothetical_protein_CHLNCDRAFT_142059_[Chlorella_variabilis]
FPKM:3.49 TPM:2.76
1494 A_BomoMG_comp17067_c0_seq1
315bp
FPKM:3.77 TPM:2.98
1495 A_BomoMG_comp17068_c0_seq1
548bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Plutella_xylostella]
FPKM:2.04 TPM:1.61
1496 A_BomoMG_comp170707_c0_seq1
575bp
FPKM:2.00 TPM:1.58
1497 A_BomoMG_comp17070_c0_seq1
271bp
FPKM:3.01 TPM:2.38
1498 A_BomoMG_comp17071_c0_seq1
244bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_prohormone-4_[Bactrocera_dorsalis]
GO:0005576 C extracellular region
FPKM:3.85 TPM:3.04
1499 A_BomoMG_comp17072_c0_seq1
404bp
FPKM:2.17 TPM:1.72
1500 A_BomoMG_comp17073_c0_seq1
278bp
FPKM:3.42 TPM:2.70
previous next from show/43914

- SilkBase 1999-2023 -