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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1351 A_BomoMG_comp168965_c0_seq1
828bp
FPKM:3.11 TPM:2.45
1352 A_BomoMG_comp16897_c0_seq1
799bp
 PREDICTED:_Williams-Beuren_syndrome_chromosomal_region_16_protein-like_[Amyelois_transitella]
GO:0005575 C cellular_component
GO:0005739 C mitochondrion
GO:0008150 P biological_process
GO:0044822 F RNA binding
FPKM:0.71 TPM:0.56
1353 A_BomoMG_comp16897_c0_seq2
813bp
 PREDICTED:_Williams-Beuren_syndrome_chromosomal_region_16_protein-like_[Amyelois_transitella]
GO:0005575 C cellular_component
GO:0005739 C mitochondrion
GO:0008150 P biological_process
GO:0044822 F RNA binding
FPKM:1.25 TPM:0.99
1354 A_BomoMG_comp16898_c0_seq1
517bp
FPKM:1.91 TPM:1.51
1355 A_BomoMG_comp16899_c0_seq1
345bp
 PREDICTED:_uncharacterized_protein_LOC106141856_[Amyelois_transitella]
FPKM:2.45 TPM:1.93
1356 A_BomoMG_comp169001_c0_seq1
563bp
FPKM:3.04 TPM:2.40
1357 A_BomoMG_comp16901_c0_seq1
649bp
FPKM:2.74 TPM:2.16
1358 A_BomoMG_comp16902_c0_seq1
297bp
 hypothetical_protein_[Oceanospirillum_beijerinckii]
FPKM:3.35 TPM:2.65
1359 A_BomoMG_comp16903_c0_seq1
261bp
 hypothetical_protein_[Komagataeibacter_hansenii]
FPKM:1.96 TPM:1.55
1360 A_BomoMG_comp16904_c0_seq1
853bp
 reverse_transcriptase_[Bombyx_mori]
FPKM:2.10 TPM:1.66
1361 A_BomoMG_comp16906_c0_seq1
215bp
FPKM:4.35 TPM:3.44
1362 A_BomoMG_comp16907_c0_seq1
1359bp
 PREDICTED:_stress-activated_map_kinase-interacting_protein_1_[Papilio_machaon]
GO:0003674 F molecular_function
GO:0005829 C cytosol
GO:0006915 P apoptotic process
GO:0031932 C TORC2 complex
FPKM:2.02 TPM:1.60
1363 A_BomoMG_comp16908_c0_seq1
382bp
 PREDICTED:_DNA-binding_protein_RFX2_[Bombyx_mori]
FPKM:1.74 TPM:1.38
1364 A_BomoMG_comp169099_c0_seq1
211bp
 MULTISPECIES:_polynucleotide_kinase-phosphatase_[Streptomyces]
FPKM:5.18 TPM:4.10
1365 A_BomoMG_comp16909_c0_seq1
279bp
FPKM:3.67 TPM:2.90
1366 A_BomoMG_comp16911_c0_seq1
755bp
 PREDICTED:_RNA-binding_protein_48_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0005654 C nucleoplasm
FPKM:1.65 TPM:1.30
1367 A_BomoMG_comp169129_c0_seq1
416bp
FPKM:2.21 TPM:1.75
1368 A_BomoMG_comp16912_c0_seq1
606bp
 Y+L_amino_acid_transporter_2_[Papilio_xuthus]
GO:0003333 P amino acid transmembrane transport
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006865 P amino acid transport
GO:0015171 F amino acid transmembrane transporter activity
GO:0015179 F L-amino acid transmembrane transporter activity
GO:0015297 F antiporter activity
GO:0015807 P L-amino acid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016323 C basolateral plasma membrane
GO:1902475 P L-alpha-amino acid transmembrane transport
FPKM:2.35 TPM:1.85
1369 A_BomoMG_comp16913_c0_seq1
412bp
 hypothetical_protein_C922_03856_[Plasmodium_inui_San_Antonio_1]
FPKM:0.00 TPM:0.00
1370 A_BomoMG_comp16913_c0_seq2
623bp
FPKM:1.56 TPM:1.23
1371 A_BomoMG_comp16914_c0_seq1
582bp
 PREDICTED:_importin-13_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006606 P protein import into nucleus
GO:0006810 P transport
GO:0008139 F nuclear localization sequence binding
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0031965 C nuclear membrane
FPKM:1.79 TPM:1.42
1372 A_BomoMG_comp169158_c0_seq1
362bp
 PREDICTED:_N-sulphoglucosamine_sulphohydrolase_[Plutella_xylostella]
GO:0003824 F catalytic activity
GO:0005764 C lysosome
GO:0006027 P glycosaminoglycan catabolic process
GO:0006029 P proteoglycan metabolic process
GO:0008152 P metabolic process
GO:0008484 F sulfuric ester hydrolase activity
GO:0016250 F N-sulfoglucosamine sulfohydrolase activity
GO:0016787 F hydrolase activity
GO:0043202 C lysosomal lumen
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
FPKM:4.68 TPM:3.69
1373 A_BomoMG_comp16915_c0_seq1
506bp
FPKM:2.17 TPM:1.72
1374 A_BomoMG_comp169169_c0_seq1
1068bp
 PREDICTED:_zinc_finger_protein_830_[Papilio_polytes]
GO:0003676 F nucleic acid binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007275 P multicellular organism development
GO:0008270 F zinc ion binding
GO:0016607 C nuclear speck
GO:0046872 F metal ion binding
GO:0051301 P cell division
FPKM:3.67 TPM:2.90
1375 A_BomoMG_comp16917_c0_seq1
317bp
FPKM:2.63 TPM:2.08
1376 A_BomoMG_comp169180_c0_seq1
944bp
FPKM:3.72 TPM:2.94
1377 A_BomoMG_comp16919_c0_seq1
970bp
 PREDICTED:_histone_acetyltransferase_KAT7_[Bombyx_mori]
GO:0000123 C histone acetyltransferase complex
GO:0003700 F DNA-binding transcription factor activity
GO:0004402 F histone acetyltransferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006260 P DNA replication
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0016747 F acyltransferase activity, transferring groups other than amino-acyl groups
GO:0043966 P histone H3 acetylation
GO:0043981 P histone H4-K5 acetylation
GO:0043982 P histone H4-K8 acetylation
GO:0043983 P histone H4-K12 acetylation
GO:0043984 P histone H4-K16 acetylation
GO:0046872 F metal ion binding
GO:1900182 P positive regulation of protein localization to nucleus
FPKM:1.71 TPM:1.35
1378 A_BomoMG_comp16919_c1_seq1
323bp
 hypothetical_protein_[Listeria_fleischmannii]
FPKM:3.81 TPM:3.01
1379 A_BomoMG_comp16921_c0_seq1
214bp
 PREDICTED:_uncharacterized_protein_LOC106136756_[Amyelois_transitella]
FPKM:3.86 TPM:3.05
1380 A_BomoMG_comp16923_c0_seq1
851bp
FPKM:2.21 TPM:1.75
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