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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1321 A_BomoMG_comp168607_c0_seq1
747bp
FPKM:3.40 TPM:2.69
1322 A_BomoMG_comp16866_c0_seq1
408bp
 PREDICTED:_iron-sulfur_cluster_co-chaperone_protein_HscB,_mitochondrial_[Papilio_xuthus]
GO:0003674 F molecular_function
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006457 P protein folding
GO:0016226 P iron-sulfur cluster assembly
GO:0046872 F metal ion binding
GO:0051087 F chaperone binding
GO:0051259 P protein complex oligomerization
FPKM:1.85 TPM:1.46
1323 A_BomoMG_comp16868_c0_seq1
997bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:1.96 TPM:1.55
1324 A_BomoMG_comp16868_c0_seq2
376bp
 PREDICTED:_very-long-chain_enoyl-CoA_reductase_[Callorhinchus_milii]
FPKM:0.98 TPM:0.77
1325 A_BomoMG_comp16868_c0_seq3
997bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:0.00 TPM:0.00
1326 A_BomoMG_comp168696_c0_seq1
392bp
 PREDICTED:_PHD_finger_protein_12_[Bombyx_mori]
FPKM:4.10 TPM:3.24
1327 A_BomoMG_comp16869_c0_seq1
333bp
 Hamartin_[Papilio_xuthus]
FPKM:3.40 TPM:2.69
1328 A_BomoMG_comp16871_c0_seq1
277bp
 PREDICTED:_voltage-dependent_calcium_channel_subunit_alpha-2/delta-4_[Bombyx_mori]
GO:0005244 F voltage-gated ion channel activity
GO:0005246 F calcium channel regulator activity
GO:0005262 F calcium channel activity
GO:0005891 C voltage-gated calcium channel complex
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034765 P regulation of ion transmembrane transport
GO:0046872 F metal ion binding
GO:0051924 P regulation of calcium ion transport
GO:0070588 P calcium ion transmembrane transport
FPKM:3.16 TPM:2.49
1329 A_BomoMG_comp168725_c0_seq1
673bp
 nucleolar_protein_family_A_member_2_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005732 C sno(s)RNA-containing ribonucleoprotein complex
GO:0006364 P rRNA processing
GO:0009267 P cellular response to starvation
GO:0030515 F snoRNA binding
GO:0030529 C ribonucleoprotein complex
GO:0031118 P rRNA pseudouridine synthesis
GO:0042254 P ribosome biogenesis
FPKM:3.53 TPM:2.79
1330 A_BomoMG_comp168728_c0_seq1
249bp
FPKM:1.10 TPM:0.87
1331 A_BomoMG_comp16872_c0_seq1
517bp
 nitric_oxide_synthase-like_protein_[Bombyx_mori]
GO:0004517 F nitric-oxide synthase activity
GO:0005506 F iron ion binding
GO:0005516 F calmodulin binding
GO:0006809 P nitric oxide biosynthetic process
GO:0010181 F FMN binding
GO:0016491 F oxidoreductase activity
GO:0020037 F heme binding
GO:0046872 F metal ion binding
GO:0050660 F flavin adenine dinucleotide binding
GO:0050661 F NADP binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:1.91 TPM:1.51
1332 A_BomoMG_comp16874_c0_seq1
220bp
FPKM:4.57 TPM:3.61
1333 A_BomoMG_comp16875_c0_seq1
556bp
 ORF_A_span_522-1895;_first_start_codon_at_663_[Autographa_californica_nucleopolyhedrovirus]
FPKM:1.82 TPM:1.44
1334 A_BomoMG_comp16876_c0_seq1
962bp
 RCC1_domain-containing_protein_1_[Operophtera_brumata]
GO:0001669 C acrosomal vesicle
FPKM:1.40 TPM:1.11
1335 A_BomoMG_comp16876_c0_seq2
538bp
 PREDICTED:_RCC1_domain-containing_protein_1_isoform_X2_[Bombyx_mori]
GO:0000079 P regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0000209 P protein polyubiquitination
GO:0002376 P immune system process
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0016874 F ligase activity
GO:0032020 P ISG15-protein conjugation
GO:0032480 P negative regulation of type I interferon production
GO:0042296 F ISG15 transferase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0044822 F RNA binding
GO:0045087 P innate immune response
GO:0048471 C perinuclear region of cytoplasm
GO:0050688 P regulation of defense response to virus
GO:0051607 P defense response to virus
FPKM:0.20 TPM:0.16
1336 A_BomoMG_comp16880_c0_seq1
633bp
FPKM:0.45 TPM:0.36
1337 A_BomoMG_comp16880_c0_seq2
548bp
FPKM:2.05 TPM:1.62
1338 A_BomoMG_comp16881_c0_seq1
400bp
FPKM:2.35 TPM:1.86
1339 A_BomoMG_comp16884_c0_seq1
355bp
FPKM:2.51 TPM:1.98
1340 A_BomoMG_comp16884_c1_seq1
215bp
FPKM:1.09 TPM:0.86
1341 A_BomoMG_comp16885_c0_seq1
466bp
FPKM:2.33 TPM:1.84
1342 A_BomoMG_comp16886_c0_seq1
231bp
 hypothetical_protein_[Vibrio_owensii]
FPKM:3.55 TPM:2.80
1343 A_BomoMG_comp16887_c0_seq1
511bp
 PREDICTED:_solute_carrier_family_35_member_G1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0051480 P regulation of cytosolic calcium ion concentration
GO:1990034 P calcium ion export across plasma membrane
FPKM:1.94 TPM:1.53
1344 A_BomoMG_comp16888_c0_seq1
446bp
 hypothetical_protein_[Methylocapsa_acidiphila]
FPKM:2.49 TPM:1.97
1345 A_BomoMG_comp16889_c0_seq1
642bp
 PREDICTED:_trafficking_protein_particle_complex_subunit_10_[Bombyx_mori]
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006891 P intra-Golgi vesicle-mediated transport
GO:0016192 P vesicle-mediated transport
GO:0017112 F guanyl-nucleotide exchange factor activity
GO:0030008 C TRAPP complex
GO:0030425 C dendrite
GO:0034498 P early endosome to Golgi transport
GO:0042995 C cell projection
GO:0043087 P regulation of GTPase activity
GO:0043204 C perikaryon
GO:0043547 P positive regulation of GTPase activity
GO:1990071 C TRAPPII protein complex
FPKM:1.20 TPM:0.95
1346 A_BomoMG_comp16891_c0_seq1
632bp
 olfactory_receptor_[Bombyx_mori]
FPKM:1.99 TPM:1.57
1347 A_BomoMG_comp16892_c0_seq1
205bp
 PREDICTED:_SH3_and_multiple_ankyrin_repeat_domains_protein_3_[Bombyx_mori]
FPKM:3.79 TPM:2.99
1348 A_BomoMG_comp168939_c0_seq1
338bp
FPKM:4.68 TPM:3.70
1349 A_BomoMG_comp16893_c0_seq1
320bp
FPKM:2.80 TPM:2.21
1350 A_BomoMG_comp16895_c0_seq1
311bp
FPKM:3.41 TPM:2.69
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