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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1291 A_BomoMG_comp167462_c0_seq1
1109bp
 PREDICTED:_polyprenol_reductase_isoform_X2_[Amyelois_transitella]
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006486 P protein glycosylation
GO:0006488 P dolichol-linked oligosaccharide biosynthetic process
GO:0006629 P lipid metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016095 P polyprenol catabolic process
GO:0016491 F oxidoreductase activity
GO:0016627 F oxidoreductase activity, acting on the CH-CH group of donors
GO:0019348 P dolichol metabolic process
GO:0055114 P obsolete oxidation-reduction process
FPKM:2.85 TPM:2.25
1292 A_BomoMG_comp167560_c0_seq1
559bp
FPKM:4.60 TPM:3.63
1293 A_BomoMG_comp167597_c0_seq1
211bp
 PREDICTED:_uncharacterized_protein_LOC101744165_[Bombyx_mori]
FPKM:0.58 TPM:0.46
1294 A_BomoMG_comp167630_c0_seq1
1028bp
 PREDICTED:_uncharacterized_protein_LOC106134081_[Amyelois_transitella]
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0006470 P protein dephosphorylation
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0035335 P peptidyl-tyrosine dephosphorylation
FPKM:3.45 TPM:2.73
1295 A_BomoMG_comp167707_c0_seq1
711bp
 PREDICTED:_DNA_mismatch_repair_protein_Msh2_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006298 P mismatch repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0030983 F mismatched DNA binding
GO:0032300 C mismatch repair complex
GO:0032301 C MutSalpha complex
FPKM:4.15 TPM:3.28
1296 A_BomoMG_comp167878_c0_seq1
223bp
 olfactory_receptor_[Bombyx_mori]
FPKM:0.00 TPM:0.00
1297 A_BomoMG_comp167887_c0_seq1
261bp
 PREDICTED:_wiskott-Aldrich_syndrome_protein_family_member_3_[Amyelois_transitella]
FPKM:6.87 TPM:5.43
1298 A_BomoMG_comp167947_c0_seq1
944bp
 PREDICTED:_calcineurin-binding_protein_cabin-1-like_[Papilio_polytes]
FPKM:3.03 TPM:2.39
1299 A_BomoMG_comp168080_c0_seq1
1103bp
 PREDICTED:_mediator_of_RNA_polymerase_II_transcription_subunit_13_[Bombyx_mori]
GO:0001104 F transcription coregulator activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0016592 C mediator complex
FPKM:3.96 TPM:3.13
1300 A_BomoMG_comp168111_c0_seq1
351bp
FPKM:4.38 TPM:3.46
1301 A_BomoMG_comp168127_c0_seq1
530bp
FPKM:3.10 TPM:2.45
1302 A_BomoMG_comp168135_c0_seq1
416bp
FPKM:4.15 TPM:3.28
1303 A_BomoMG_comp168176_c0_seq1
438bp
 histidine_kinase_[Flavobacterium_sp._Leaf82]
FPKM:3.58 TPM:2.83
1304 A_BomoMG_comp168184_c0_seq1
634bp
 hypothetical_protein_KGM_11778_[Danaus_plexippus]
FPKM:4.12 TPM:3.25
1305 A_BomoMG_comp168220_c0_seq1
588bp
 PREDICTED:_disheveled-associated_activator_of_morphogenesis_1_isoform_X2_[Bombyx_mori]
GO:0001725 C stress fiber
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0016043 P cellular component organization
GO:0017048 F small GTPase binding
GO:0030036 P actin cytoskeleton organization
GO:0042802 F identical protein binding
FPKM:0.00 TPM:0.00
1306 A_BomoMG_comp168220_c0_seq2
588bp
 PREDICTED:_disheveled-associated_activator_of_morphogenesis_1_isoform_X2_[Bombyx_mori]
GO:0001725 C stress fiber
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0016043 P cellular component organization
GO:0017048 F small GTPase binding
GO:0030036 P actin cytoskeleton organization
GO:0042802 F identical protein binding
FPKM:3.62 TPM:2.86
1307 A_BomoMG_comp168222_c0_seq1
320bp
 PREDICTED:_muskelin_[Amyelois_transitella]
FPKM:6.89 TPM:5.45
1308 A_BomoMG_comp16824_c0_seq1
284bp
 hypothetical_protein_RF55_22015_[Lasius_niger]
FPKM:0.82 TPM:0.65
1309 A_BomoMG_comp168258_c0_seq1
748bp
 PREDICTED:_ecto-NOX_disulfide-thiol_exchanger_2_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0007624 P ultradian rhythm
GO:0009897 C external side of plasma membrane
GO:0015035 F protein-disulfide reductase activity
GO:0016020 C membrane
GO:0016049 P cell growth
GO:0016491 F oxidoreductase activity
GO:0040008 P regulation of growth
GO:0048511 P rhythmic process
GO:0055114 P obsolete oxidation-reduction process
FPKM:2.84 TPM:2.25
1310 A_BomoMG_comp168297_c0_seq1
905bp
FPKM:3.72 TPM:2.94
1311 A_BomoMG_comp168302_c0_seq1
1141bp
 PREDICTED:_uncharacterized_protein_LOC106120362_[Papilio_xuthus]
FPKM:2.84 TPM:2.24
1312 A_BomoMG_comp168313_c0_seq1
1506bp
 PREDICTED:_major_facilitator_superfamily_domain-containing_protein_6_isoform_X3_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:2.84 TPM:2.24
1313 A_BomoMG_comp168354_c0_seq1
808bp
 PREDICTED:_vacuolar_protein_sorting-associated_protein_13D,_partial_[Amyelois_transitella]
GO:0005622 C intracellular anatomical structure
GO:0006623 P protein targeting to vacuole
GO:0019898 C extrinsic component of membrane
GO:0045053 P protein retention in Golgi apparatus
GO:0070062 C extracellular exosome
FPKM:3.54 TPM:2.80
1314 A_BomoMG_comp168379_c0_seq1
511bp
 similar_to_CG17680_[Papilio_xuthus]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005739 C mitochondrion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0045089 P positive regulation of innate immune response
GO:0050829 P defense response to Gram-negative bacterium
FPKM:3.68 TPM:2.90
1315 A_BomoMG_comp168405_c0_seq1
319bp
FPKM:4.77 TPM:3.77
1316 A_BomoMG_comp168439_c0_seq1
201bp
 ABC_transporter_substrate-binding_protein_[Granulicella_tundricola]
FPKM:2.70 TPM:2.13
1317 A_BomoMG_comp168535_c0_seq1
755bp
 PREDICTED:_uncharacterized_protein_LOC106130065_[Amyelois_transitella]
FPKM:3.72 TPM:2.94
1318 A_BomoMG_comp168569_c0_seq1
708bp
FPKM:2.25 TPM:1.78
1319 A_BomoMG_comp168580_c0_seq1
399bp
 PREDICTED:_spastin_[Callorhinchus_milii]
FPKM:4.43 TPM:3.50
1320 A_BomoMG_comp168602_c0_seq1
340bp
 hypothetical_protein_CGLO_16014_[Colletotrichum_gloeosporioides_Cg-14]
FPKM:2.89 TPM:2.29
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