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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1261 A_BomoMG_comp166227_c0_seq1
935bp
FPKM:3.86 TPM:3.05
1262 A_BomoMG_comp166228_c0_seq1
309bp
 D-hexose-6-phosphate_mutarotase_[Haemophilus_influenzae]
FPKM:3.68 TPM:2.91
1263 A_BomoMG_comp166233_c0_seq1
1506bp
 PREDICTED:_integrator_complex_subunit_1-like_[Bombyx_mori]
GO:0001832 P blastocyst growth
GO:0001833 P inner cell mass cell proliferation
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016180 P snRNA processing
GO:0031965 C nuclear membrane
GO:0032039 C integrator complex
GO:0034474 P U2 snRNA 3'-end processing
GO:0043066 P negative regulation of apoptotic process
GO:0043154 P negative regulation of cysteine-type endopeptidase activity involved in apoptotic process
FPKM:4.07 TPM:3.21
1264 A_BomoMG_comp166243_c0_seq1
308bp
 hypothetical_protein_[Citrobacter_youngae]
FPKM:6.02 TPM:4.76
1265 A_BomoMG_comp166252_c0_seq1
416bp
 Fat-like_cadherin-related_tumor_suppressor-like_[Papilio_xuthus]
GO:0003674 F molecular_function
GO:0004872 F signaling receptor activity
GO:0005509 F calcium ion binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005925 C focal adhesion
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007293 P germarium-derived egg chamber formation
GO:0007295 P growth of a germarium-derived egg chamber
GO:0007424 P open tracheal system development
GO:0007431 P salivary gland development
GO:0007440 P foregut morphogenesis
GO:0007442 P hindgut morphogenesis
GO:0009925 C basal plasma membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016339 P calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0030950 P establishment or maintenance of actin cytoskeleton polarity
GO:0042247 P establishment of planar polarity of follicular epithelium
GO:0044331 P cell-cell adhesion mediated by cadherin
GO:0045089 P positive regulation of innate immune response
GO:0045571 P negative regulation of imaginal disc growth
GO:0048477 P oogenesis
GO:0050829 P defense response to Gram-negative bacterium
GO:0050839 F cell adhesion molecule binding
GO:0060429 P epithelium development
FPKM:4.01 TPM:3.17
1266 A_BomoMG_comp166330_c0_seq1
217bp
FPKM:1.59 TPM:1.25
1267 A_BomoMG_comp166372_c0_seq1
421bp
FPKM:5.02 TPM:3.97
1268 A_BomoMG_comp166420_c0_seq1
385bp
 PREDICTED:_eukaryotic_translation_initiation_factor_4E_transporter-like_[Bombyx_mori]
FPKM:4.69 TPM:3.71
1269 A_BomoMG_comp166540_c0_seq1
299bp
FPKM:3.93 TPM:3.10
1270 A_BomoMG_comp166544_c0_seq1
429bp
FPKM:4.09 TPM:3.23
1271 A_BomoMG_comp166603_c0_seq1
1585bp
 PREDICTED:_GTPase-activating_protein_[Amyelois_transitella]
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0007062 P sister chromatid cohesion
GO:0007067 P mitotic cell cycle
GO:0007165 P signal transduction
GO:0007265 P Ras protein signal transduction
GO:0007426 P tracheal outgrowth, open tracheal system
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0008293 P torso signaling pathway
GO:0008595 P anterior/posterior axis specification, embryo
GO:0016321 P female meiosis chromosome segregation
GO:0019233 P sensory perception of pain
GO:0022008 P neurogenesis
GO:0031235 C intrinsic component of the cytoplasmic side of the plasma membrane
GO:0035556 P intracellular signal transduction
GO:0043087 P regulation of GTPase activity
GO:0043547 P positive regulation of GTPase activity
GO:0045678 P positive regulation of R7 cell differentiation
GO:0046580 P negative regulation of Ras protein signal transduction
GO:0046872 F metal ion binding
FPKM:3.28 TPM:2.59
1272 A_BomoMG_comp166626_c0_seq1
264bp
 carboxylate--amine_ligase_[Leucobacter_sp._CBX151]
FPKM:4.78 TPM:3.78
1273 A_BomoMG_comp166639_c0_seq1
217bp
 PTS_fructose_transporter_subunit_IIB_[Clostridium_baratii]
FPKM:1.06 TPM:0.84
1274 A_BomoMG_comp166682_c0_seq1
554bp
 DNA_polymerase_epsilon_subunit_4_[Operophtera_brumata]
GO:0003674 F molecular_function
GO:0003677 F DNA binding
GO:0003887 F DNA-directed DNA polymerase activity
GO:0005634 C nucleus
GO:0005671 C obsolete Ada2/Gcn5/Ada3 transcription activator complex
GO:0008622 C epsilon DNA polymerase complex
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0043966 P histone H3 acetylation
GO:0046982 F protein heterodimerization activity
GO:0071897 P DNA biosynthetic process
FPKM:5.02 TPM:3.97
1275 A_BomoMG_comp166706_c0_seq1
496bp
FPKM:2.56 TPM:2.02
1276 A_BomoMG_comp166719_c0_seq1
512bp
FPKM:4.28 TPM:3.38
1277 A_BomoMG_comp166752_c0_seq1
692bp
FPKM:3.41 TPM:2.69
1278 A_BomoMG_comp166755_c0_seq1
342bp
FPKM:3.44 TPM:2.72
1279 A_BomoMG_comp166925_c0_seq1
1061bp
 PREDICTED:_PIN2/TERF1-interacting_telomerase_inhibitor_1_[Plutella_xylostella]
GO:0000228 C nuclear chromosome
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000777 C kinetochore
GO:0000781 C chromosome, telomeric region
GO:0000784 C chromosome, telomeric region
GO:0003676 F nucleic acid binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005819 C spindle
GO:0007004 P telomere maintenance via telomerase
GO:0007080 P mitotic metaphase plate congression
GO:0010521 F telomerase inhibitor activity
GO:0031397 P negative regulation of protein ubiquitination
GO:0031647 P regulation of protein stability
GO:0032211 P negative regulation of telomere maintenance via telomerase
GO:0043231 C intracellular membrane-bounded organelle
GO:0051974 P negative regulation of telomerase activity
GO:0070034 F telomerase RNA binding
GO:0070198 P protein localization to chromosome, telomeric region
GO:1902570 P protein localization to nucleolus
GO:1904744 P positive regulation of telomeric DNA binding
GO:1904751 P positive regulation of protein localization to nucleolus
FPKM:3.53 TPM:2.79
1280 A_BomoMG_comp166964_c0_seq1
245bp
FPKM:4.57 TPM:3.61
1281 A_BomoMG_comp166977_c0_seq1
348bp
FPKM:3.33 TPM:2.63
1282 A_BomoMG_comp167007_c0_seq1
742bp
 PREDICTED:_exocyst_complex_component_7_[Bombyx_mori]
GO:0000145 C exocyst
GO:0005546 F phosphatidylinositol-4,5-bisphosphate binding
GO:0006810 P transport
GO:0006887 P exocytosis
GO:0007269 P neurotransmitter secretion
GO:0008013 F beta-catenin binding
GO:0015031 P protein transport
GO:0016080 P synaptic vesicle targeting
GO:0016081 P synaptic vesicle docking
GO:0016192 P vesicle-mediated transport
GO:0098793 C presynapse
FPKM:4.12 TPM:3.25
1283 A_BomoMG_comp167099_c0_seq1
2586bp
 PREDICTED:_F-box/WD_repeat-containing_protein_7_isoform_X1_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0007049 P cell cycle
GO:0007088 P regulation of mitotic nuclear division
GO:0007096 P regulation of exit from mitosis
GO:0007411 P axon guidance
GO:0007419 P ventral cord development
GO:0008054 P anaphase-promoting complex-dependent catabolic process
GO:0016567 P protein ubiquitination
GO:0019005 C SCF ubiquitin ligase complex
GO:0030162 P regulation of proteolysis
GO:0030332 F cyclin binding
GO:0031146 P SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0035147 P branch fusion, open tracheal system
GO:0042023 P DNA endoreduplication
GO:0045926 P negative regulation of growth
GO:0060253 P negative regulation of glial cell proliferation
GO:0060438 P trachea development
GO:0071456 P cellular response to hypoxia
GO:1900038 P negative regulation of cellular response to hypoxia
GO:1903146 P regulation of autophagy of mitochondrion
FPKM:2.30 TPM:1.81
1284 A_BomoMG_comp167246_c0_seq1
201bp
FPKM:4.72 TPM:3.73
1285 A_BomoMG_comp167284_c0_seq1
395bp
FPKM:4.50 TPM:3.56
1286 A_BomoMG_comp167286_c0_seq1
580bp
FPKM:4.29 TPM:3.39
1287 A_BomoMG_comp167346_c0_seq1
302bp
 hypothetical_protein_[Actinopolyspora_erythraea]
FPKM:4.81 TPM:3.80
1288 A_BomoMG_comp167361_c0_seq1
384bp
FPKM:4.40 TPM:3.47
1289 A_BomoMG_comp167370_c0_seq1
713bp
 hypothetical_protein_U27_04308_[bacterium_UASB270]
FPKM:3.87 TPM:3.06
1290 A_BomoMG_comp167442_c0_seq1
239bp
FPKM:5.27 TPM:4.16
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