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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
841 A_BomoFB_comp10196_c0_seq4
5605bp
 PREDICTED:_restin_homolog_isoform_X9_[Bombyx_mori]
GO:0000776 C kinetochore
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0005876 C spindle microtubule
GO:0007017 P microtubule-based process
GO:0007349 P cellularization
GO:0008017 F microtubule binding
GO:0030424 C axon
GO:0035371 C microtubule plus-end
GO:0044295 C axonal growth cone
GO:0045169 C fusome
GO:0051010 F microtubule plus-end binding
GO:0070854 F myosin VI heavy chain binding
FPKM:7.63 TPM:8.36
842 A_BomoFB_comp10196_c0_seq5
5550bp
 PREDICTED:_restin_homolog_isoform_X5_[Bombyx_mori]
GO:0000776 C kinetochore
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0005876 C spindle microtubule
GO:0007017 P microtubule-based process
GO:0007349 P cellularization
GO:0008017 F microtubule binding
GO:0030424 C axon
GO:0035371 C microtubule plus-end
GO:0044295 C axonal growth cone
GO:0045169 C fusome
GO:0051010 F microtubule plus-end binding
GO:0070854 F myosin VI heavy chain binding
FPKM:0.91 TPM:1.00
843 A_BomoFB_comp10196_c0_seq6
2368bp
 PREDICTED:_restin_homolog_isoform_X9_[Bombyx_mori]
GO:0000776 C kinetochore
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0005876 C spindle microtubule
GO:0007017 P microtubule-based process
GO:0007349 P cellularization
GO:0008017 F microtubule binding
GO:0030424 C axon
GO:0035371 C microtubule plus-end
GO:0044295 C axonal growth cone
GO:0045169 C fusome
GO:0051010 F microtubule plus-end binding
GO:0070854 F myosin VI heavy chain binding
FPKM:25.78 TPM:28.24
844 A_BomoFB_comp10196_c0_seq7
2313bp
 PREDICTED:_restin_homolog_isoform_X10_[Bombyx_mori]
GO:0000776 C kinetochore
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0005876 C spindle microtubule
GO:0007017 P microtubule-based process
GO:0007349 P cellularization
GO:0008017 F microtubule binding
GO:0030424 C axon
GO:0035371 C microtubule plus-end
GO:0044295 C axonal growth cone
GO:0045169 C fusome
GO:0051010 F microtubule plus-end binding
GO:0070854 F myosin VI heavy chain binding
FPKM:0.56 TPM:0.62
845 A_BomoFB_comp10196_c0_seq8
5973bp
 PREDICTED:_restin_homolog_isoform_X4_[Bombyx_mori]
GO:0000776 C kinetochore
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0005876 C spindle microtubule
GO:0007017 P microtubule-based process
GO:0007349 P cellularization
GO:0008017 F microtubule binding
GO:0030424 C axon
GO:0035371 C microtubule plus-end
GO:0044295 C axonal growth cone
GO:0045169 C fusome
GO:0051010 F microtubule plus-end binding
GO:0070854 F myosin VI heavy chain binding
FPKM:0.11 TPM:0.12
846 A_BomoFB_comp10196_c0_seq9
2826bp
 PREDICTED:_restin_homolog_isoform_X2_[Bombyx_mori]
GO:0000776 C kinetochore
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0005876 C spindle microtubule
GO:0007017 P microtubule-based process
GO:0007349 P cellularization
GO:0008017 F microtubule binding
GO:0030424 C axon
GO:0035371 C microtubule plus-end
GO:0044295 C axonal growth cone
GO:0045169 C fusome
GO:0051010 F microtubule plus-end binding
GO:0070854 F myosin VI heavy chain binding
FPKM:2.83 TPM:3.10
847 A_BomoFB_comp101979_c0_seq1
355bp
 hypothetical_protein_[Lechevalieria_aerocolonigenes]
FPKM:1.89 TPM:2.07
848 A_BomoFB_comp10197_c0_seq1
6151bp
 PREDICTED:_dystrophin,_isoform_B-like_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005938 C cell cortex
GO:0007274 P neuromuscular synaptic transmission
GO:0007474 P imaginal disc-derived wing vein specification
GO:0008092 F cytoskeletal protein binding
GO:0008270 F zinc ion binding
GO:0008307 F structural constituent of muscle
GO:0008586 P imaginal disc-derived wing vein morphogenesis
GO:0016010 C dystrophin-associated glycoprotein complex
GO:0016020 C membrane
GO:0030010 P establishment of cell polarity
GO:0042383 C sarcolemma
GO:0045202 C synapse
GO:0046716 P muscle cell cellular homeostasis
GO:0046872 F metal ion binding
GO:0046928 P regulation of neurotransmitter secretion
GO:0048172 P regulation of short-term neuronal synaptic plasticity
GO:0050699 F WW domain binding
FPKM:7.58 TPM:8.30
849 A_BomoFB_comp10198_c0_seq1
966bp
 putative_MFS-type_transporter_C19orf28-like_[Papilio_xuthus]
GO:0003674 F molecular_function
GO:0005765 C lysosomal membrane
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:0.00 TPM:0.00
850 A_BomoFB_comp10198_c0_seq2
1668bp
 PREDICTED:_major_facilitator_superfamily_domain-containing_protein_12-like_isoform_X2_[Bombyx_mori]
GO:0005765 C lysosomal membrane
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:0.01 TPM:0.01
851 A_BomoFB_comp10198_c0_seq3
1611bp
 Uncharacterized_protein_OBRU01_14843_[Operophtera_brumata]
FPKM:0.55 TPM:0.61
852 A_BomoFB_comp10198_c0_seq4
1681bp
 Uncharacterized_protein_OBRU01_14843_[Operophtera_brumata]
FPKM:2.62 TPM:2.87
853 A_BomoFB_comp10198_c0_seq5
2325bp
 PREDICTED:_major_facilitator_superfamily_domain-containing_protein_12-like_isoform_X2_[Bombyx_mori]
GO:0005765 C lysosomal membrane
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:0.00 TPM:0.00
854 A_BomoFB_comp10198_c0_seq6
1796bp
 PREDICTED:_major_facilitator_superfamily_domain-containing_protein_12-like_isoform_X2_[Bombyx_mori]
GO:0005765 C lysosomal membrane
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:9.03 TPM:9.90
855 A_BomoFB_comp10198_c0_seq7
2197bp
 PREDICTED:_major_facilitator_superfamily_domain-containing_protein_12-like_isoform_X2_[Bombyx_mori]
GO:0005765 C lysosomal membrane
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:0.00 TPM:0.00
856 A_BomoFB_comp10198_c0_seq8
838bp
 PREDICTED:_major_facilitator_superfamily_domain-containing_protein_12-like_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005765 C lysosomal membrane
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:2.28 TPM:2.49
857 A_BomoFB_comp10198_c1_seq1
627bp
FPKM:2.32 TPM:2.55
858 A_BomoFB_comp10198_c2_seq1
981bp
 hypothetical_protein_RR48_01719_[Papilio_machaon]
FPKM:2.79 TPM:3.06
859 A_BomoFB_comp10198_c3_seq1
703bp
FPKM:2.30 TPM:2.52
860 A_BomoFB_comp10198_c4_seq1
707bp
FPKM:2.69 TPM:2.95
861 A_BomoFB_comp10199_c0_seq1
4391bp
 PREDICTED:_F-box_only_protein_11_[Papilio_polytes]
GO:0000151 C ubiquitin ligase complex
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006464 P cellular protein modification process
GO:0007605 P sensory perception of sound
GO:0008270 F zinc ion binding
GO:0016274 F protein-arginine N-methyltransferase activity
GO:0016567 P protein ubiquitination
GO:0035246 P peptidyl-arginine N-methylation
GO:0046872 F metal ion binding
FPKM:7.04 TPM:7.72
862 A_BomoFB_comp10199_c0_seq2
4084bp
 PREDICTED:_F-box_only_protein_11_[Papilio_polytes]
GO:0000151 C ubiquitin ligase complex
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006464 P cellular protein modification process
GO:0007605 P sensory perception of sound
GO:0008270 F zinc ion binding
GO:0016274 F protein-arginine N-methyltransferase activity
GO:0016567 P protein ubiquitination
GO:0035246 P peptidyl-arginine N-methylation
GO:0046872 F metal ion binding
FPKM:4.05 TPM:4.44
863 A_BomoFB_comp101_c0_seq1
425bp
 fringe_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0001708 P cell fate specification
GO:0001745 P compound eye morphogenesis
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005795 C Golgi stack
GO:0005797 C Golgi medial cisterna
GO:0006004 P fucose metabolic process
GO:0006493 P protein O-linked glycosylation
GO:0007219 P Notch signaling pathway
GO:0007275 P multicellular organism development
GO:0007293 P germarium-derived egg chamber formation
GO:0007389 P pattern specification process
GO:0007450 P dorsal/ventral pattern formation, imaginal disc
GO:0007451 P dorsal/ventral lineage restriction, imaginal disc
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0008194 F UDP-glycosyltransferase activity
GO:0008375 F acetylglucosaminyltransferase activity
GO:0008587 P imaginal disc-derived wing margin morphogenesis
GO:0008593 P regulation of Notch signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030173 C integral component of Golgi membrane
GO:0033829 F O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase activity
GO:0035017 P cuticle pattern formation
GO:0036011 P imaginal disc-derived leg segmentation
GO:0036099 P female germ-line stem cell population maintenance
GO:0045746 P negative regulation of Notch signaling pathway
GO:0045747 P positive regulation of Notch signaling pathway
GO:0046872 F metal ion binding
GO:0048190 P wing disc dorsal/ventral pattern formation
GO:0048477 P oogenesis
GO:0048749 P compound eye development
FPKM:1.12 TPM:1.23
864 A_BomoFB_comp10200_c0_seq1
3933bp
 PREDICTED:_splicing_factor_3B_subunit_3_isoform_X1_[Amyelois_transitella]
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
FPKM:5.43 TPM:5.95
865 A_BomoFB_comp10200_c0_seq2
3886bp
 PREDICTED:_splicing_factor_3B_subunit_3_isoform_X1_[Amyelois_transitella]
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
FPKM:4.28 TPM:4.69
866 A_BomoFB_comp10200_c0_seq3
4039bp
 PREDICTED:_splicing_factor_3B_subunit_3_isoform_X1_[Amyelois_transitella]
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005689 C U12-type spliceosomal complex
GO:0005730 C nucleolus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0042177 P negative regulation of protein catabolic process
GO:0071013 C catalytic step 2 spliceosome
FPKM:0.39 TPM:0.42
867 A_BomoFB_comp10201_c0_seq1
2840bp
 PREDICTED:_UPF0430_protein_CG31712-like_isoform_X2_[Papilio_machaon]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:4.83 TPM:5.30
868 A_BomoFB_comp10201_c0_seq2
3635bp
 PREDICTED:_UPF0430_protein_CG31712-like_isoform_X1_[Papilio_machaon]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:4.03 TPM:4.42
869 A_BomoFB_comp102022_c0_seq1
1775bp
 glycosyltransferase_precursor_[Bombyx_mori]
GO:0001744 P insect visual primordium formation
GO:0005737 C cytoplasm
GO:0005887 C integral component of plasma membrane
GO:0006688 P glycosphingolipid biosynthetic process
GO:0007275 P multicellular organism development
GO:0007281 P germ cell development
GO:0007293 P germarium-derived egg chamber formation
GO:0007298 P border follicle cell migration
GO:0007299 P ovarian follicle cell-cell adhesion
GO:0007411 P axon guidance
GO:0008049 P male courtship behavior
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016325 P oocyte microtubule cytoskeleton organization
GO:0016333 P morphogenesis of follicular epithelium
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0019187 F beta-1,4-mannosyltransferase activity
GO:0030707 P ovarian follicle cell development
GO:0030720 P oocyte localization involved in germarium-derived egg chamber formation
GO:0033227 P dsRNA transport
GO:0042248 P maintenance of polarity of follicular epithelium
GO:0045165 P cell fate commitment
GO:0045434 P negative regulation of female receptivity, post-mating
GO:0046662 P regulation of oviposition
GO:0048477 P oogenesis
GO:0048935 P peripheral nervous system neuron development
GO:0097502 P mannosylation
FPKM:2.73 TPM:2.99
870 A_BomoFB_comp102029_c0_seq1
652bp
 PREDICTED:_leucine-rich_repeat-containing_protein_16A_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007015 P actin filament organization
GO:0007596 P blood coagulation
GO:0016020 C membrane
GO:0016477 P cell migration
GO:0030027 C lamellipodium
GO:0030032 P lamellipodium assembly
GO:0030335 P positive regulation of cell migration
GO:0030838 P positive regulation of actin filament polymerization
GO:0031252 C cell leading edge
GO:0031529 P ruffle organization
GO:0031941 C filamentous actin
GO:0032403 F protein-containing complex binding
GO:0042995 C cell projection
GO:0044351 P macropinocytosis
GO:0044354 C macropinosome
GO:0046415 P urate metabolic process
GO:0051496 P positive regulation of stress fiber assembly
GO:0051638 P barbed-end actin filament uncapping
GO:0051639 P actin filament network formation
GO:0070062 C extracellular exosome
GO:1900026 P positive regulation of substrate adhesion-dependent cell spreading
GO:1902745 P positive regulation of lamellipodium organization
GO:2000813 P negative regulation of barbed-end actin filament capping
FPKM:3.82 TPM:4.19
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