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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp10200_c0_seq3
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		PREDICTED:_splicing_factor_3B_subunit_3_isoform_X1_[Amyelois_transitella]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005689 C U12-type spliceosomal complex
GO:0005730 C nucleolus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0042177 P negative regulation of protein catabolic process
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:0.39 TPM:0.42
ORF EntryO_BomoFB12400_complete:A_BomoFB_comp10200_c0_seq3
Sequence
(Nucleotide)
GTCCGTGAAAACGAAGCTCAATGGCGTGCTCTGAATCCGCCATTTTACCGGCAACTGCTT
GTGCCGGTTCACCCGTGAAAATTAAATACTGCATCGAGCCGCATTGCGGCCATCAATTGC
TAATATTTAAAGGGATAGGTTAAAATAAGATCACGATGTATCTCTACAATTTAACACTGC
AAGGTTCATCTGCCATAACACATGCCGTACATGGAAATTTCTCTGGAACTAAGCAACAGG
AGATTATTATATCACGTGGCAAAACACTTGAATTGTTACGGCCAGATCCGAACACGGGAA
AGGTCCACACATTAATGAAAATTGAAATATTTGGTGTAGTTCGGTCTATTATGGCTTTTC
GTCTAACCGGAGGAACAAAAGATTACATTGTGGTTGGTTCTGATTCTGGACGTATCATCA
TTTTGGAGTACATCCCAACTAAGAACATTTTGGAGAAAGTCCATCAAGAAACATTTGGTA
AATCTGGCTGTAGGAGAATAGTTCCTGGTCAATATCTATCAATTGATCCTAAAGGAAGAG
CTGTTATGATTGGTGCAATTGAAAAACAGAAATTGGTATACATTTTGAATAGAGATGCAG
AAGCTCGACTAACAATATCTTCACCACTTGAAGCTCACAAGTCAAACACACTAGTTTATC
ACATGGTTGGTGTTGATGTTGGATTTGAAAATCCCATGTTTGCATGTTTGGAAATTGATT
ATGAAGAAGCTGATTCAGATCCTACCGGCGAAGCTGCACAAAAAACTCAACAGACTTTAA
CATTTTACGAATTAGATCTTGGTTTGAATCATGTTGTTAGAAAGTACTCTGAACCTTTAG
AAGAGCATGCAAACTTTCTCATAACTGTGCCTGGAGGAAATGATGGTCCTTCTGGTGTCC
TTATATGCTCTGAAAATTATCTCACATACAAAAATTTGGGTGATCAACATGATATTAGGT
GTCCTATACCTCGCAGAAGAAATGATTTAGATGATCCAGAAAGAGGAATGATCTTTGTTT
GTTCTGCCACGCATAAAACTAAGTCCATGTTTTTCTTTTTGGCACAAACTGAACAGGGTG
ATATTTTCAAAATAACTATAGAAACTGATGAAGATATGGTCACTGAAATAAAGCTGAAAT
ACTTTGACACTGTACCAGTGGCAACATCAATGTGTGTTCTTAAAACTGGATTTTTGTTTG
TGGCTTGTGAATTTGGCAACCACTACTTATATCAGATAGCACATTTGGGTGATGAAGATG
ATGAACCAGAATTTAGCTCTGCTATGCCTCTAGAAGAGGGCGACACATTCTTTTTTGCAC
CAAGACCTTTGAGGAATTTAGTACTGGTAGATGAAATGGATTCTTTGTCACCAATATTAG
CTTGCCATGTGGCAGATTTAGCTGGGGAAGATACTCCGCAAGTTTACTTGGCATGTGGGA
GAGGCCCACGATCCTCCCTTAGAGCACTAAGACATGGTCTTGAAGTTGCTGAAATGGCTG
TATCAGAGCTTCCAGGATCACCGAATGCTGTTTGGACAGTTCGACGAAATAAAGATGAAT
CTACTAACGGCAGGTGAACAGACATGGTTCAGCATGACGAACAGGTAGGCAGAGCAAGTT
ATCTACACTGAAGATCAACATCGCCATCAACAAAATTTTCTTAGTTACTTATTGAACATA
ATAATAGCTTTCAATTTTCTTTGGTTACAGAGGAATACGATTCTTACATCATTGTGTCAT
TCGTTAATGCCACACTTGTTCTTTCCATCGGTGAGACTGTTGAAGAAGTCACTGACTCAG
GATTTTTGGGAACTACACCTACACTTAGTTGTCATGCAATGGGTAATGACGCTCTAGTAC
AAGTATATCCTGATGGTATAAGACATATTCGTGCTGACAAACGTGTAAATGAATGGAAGG
CTCCTGGAAAAAAATCTATAGTCAGATGTGCAGTCAATCAAAGACAAGTCGTCATTGCCC
TAACTGGAGGGGAGTTGGTATATTTCGAAATGGACCCTACTGGACAGCTCAATGAATACA
CAGAAAGAAAGAAATTATCTTCAGATGTTTGTTGTATGGCATTAGGTTCAGTTGCAGCAG
GGGAACAGAGAGCATGGTTTTTAGCAGTTGGTCTCAATGATAACACTGTCAGAATTATCT
CTTTGGACCCAGCAGACTGTCTTTCACCACGTTCTATGCAAGCTCTTCCTGCTGGTGCAG
AATCATTATGCATTATTGAGCAACCATTTGAATCTGGTGCAAAATCTGCCCTGCATTTAA
ACATTGGCTTAAGCAACGGGGTGCTGTTAAGAACTACCTTAGATTCTGTAAGCGGTGATC
TTGCAGACACTAGAACTAGATACTTGGGGTCAAGACCTGTGAAGTTATTTAAAGTAAGGG
TACAAGCTGCTGAAGCAGTACTAGCTGTGTCGTCTAGAACATGGCTAGGATATCACTATC
AAAATCGTTTTCACCTTACACCTCTATCTTATGAATGTTTGGAATATGCAGCAGGATTTA
GTTCAGAACAATGTACTGAAGGCATTGTAGCCATATCTTCCAACACTCTGAGAATTTTGG
CTTTAGAAAAATTGGGAGCTGTATTCAATCAAACATTTGTCCCTTTAGAATACACACCAA
GAAAGTTTATAATAAATTCTGACAACAATCACATTATAGTTTTAGAAACTGATCACAATG
CCTACACAGAGGAAATGAAAAAACACAGAAGAATTCAAATGGCCCAAGAAATGCGTGAAG
CTGCTGCTGGAGGTGCTCCTGAAGAACAGCAACTAGCAAATGAAATGGCAGATGCTTTTC
TATCTGATACTTTGCCTGAATACATTTTTTCTTCACCTAAAGCTGGAGCAGGCATGTGGG
CATCTCTAATTCGTGTTGTTGACATGGGTATTGGTGGGGGTCAACCCAATACATTATTTA
GACTTCCACTGGAGCAAAACGAAGCAGCTGTTTCTTTGTGCATAGTAAGATGGGCTGCAC
ATGCTGAACATGCACAACCACATCTTGTGGTTGGTGTTGCAAAGGATTTGATACTGTCTC
CTCGTTCTTGCACTGAAGGCAGTCTACATGTTTATAAGATATATGGCAACACTGGAAAAT
TAGAACTTGTTCACAAAACTCCAGTAGATGAATATCCTGGTGCTATAGCAGCATTTAATG
GTAGACTACTAGCTGGTGTTGGACGCATGTTAAGATTATATGATATTGGACGACGAAAAC
TCCTACGTAAATGTGAAAATAGACATATTCCAAATTTAATAGCAGATATAAAAACGATTG
GACAGAGAATTTTTGTTTCTGATGTCCAAGAATCTGTATTTTGTGTCAAGCATAAGAAAA
GAGAGAATCAATTAATTATTTTTGCTGATGATACCAATCCTAGATGGATAACAAATAGCT
GTATTCTTGATTATGACACTATAGCAGTATCTGACAAATTTGGTAATGTGGCTATAATGC
GGTTACCACAATCTGTAAGTGATGATGTTGATGAAGATCCTACTGGAAACAAAGCACTTT
GGGACAGAGGTTTACTTAATGGTGCTTCACAAAAGGGAGATGTTGTGGTCAATTTTCATG
TTGGTGAAACTGTAACCTCTCTACAGAGAGCAACATTAATTCCTGGTGGTTCTGAAGCAC
TACTATATGCAACAATTAGTGGGTCTCTTGGCGTTCTACTACCGTTTACATCAAGAGAAG
ATCATGACTTCTTTCAACATCTAGAGATGCATATGAGAAGTGAAAATTCACCATTATGTG
GGCGTGACCATTTATCTTTTAGAAGTTATTACTACCCAGTAAAGAATGTGATTGACGGAG
ATCTATGTGAACAGTTTAACTCCCTAGACCCTGGAAAACAAAAAGCCATCGCAGGTGATT
TGGAACGTACTCCCGCTGAAGTATCAAAAAAACTTGAAGACATTCGAACTAGATATGCGT
TCTAATTAATTATAAATTAGTTAATAAGTTTTTCTATTAATATAAAAATAAAATATTGCG
ATAAGGTTCAAAAAAAAAA
(4039 bp)

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