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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
811 A_BomoFB_comp10189_c0_seq9
2135bp
 PREDICTED:_calpain-A_isoform_X2_[Bombyx_mori]
GO:0004198 F calcium-dependent cysteine-type endopeptidase activity
GO:0005509 F calcium ion binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0006909 P phagocytosis
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008340 P determination of adult lifespan
GO:0009953 P dorsal/ventral pattern formation
GO:0015629 C actin cytoskeleton
GO:0016540 P protein autoprocessing
GO:0016787 F hydrolase activity
GO:0021919 P BMP signaling pathway involved in spinal cord dorsal/ventral patterning
GO:0030036 P actin cytoskeleton organization
GO:0042335 P cuticle development
GO:0043025 C neuronal cell body
GO:0046872 F metal ion binding
GO:0050832 P defense response to fungus
FPKM:0.55 TPM:0.61
812 A_BomoFB_comp10190_c0_seq1
519bp
 PREDICTED:_transcription_factor_EB-like_[Bombyx_mori]
FPKM:1.45 TPM:1.59
813 A_BomoFB_comp10190_c1_seq1
272bp
FPKM:1.19 TPM:1.30
814 A_BomoFB_comp10190_c1_seq2
438bp
FPKM:1.70 TPM:1.87
815 A_BomoFB_comp10190_c1_seq3
269bp
FPKM:11.02 TPM:12.08
816 A_BomoFB_comp10190_c1_seq4
282bp
FPKM:1.61 TPM:1.77
817 A_BomoFB_comp101917_c0_seq1
576bp
 PREDICTED:_nuclear_pore_complex_protein_Nup98-Nup96_isoform_X1_[Bombyx_mori]
FPKM:2.90 TPM:3.18
818 A_BomoFB_comp10191_c0_seq1
2254bp
 PREDICTED:_eukaryotic_translation_initiation_factor_2-alpha_kinase-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004686 F elongation factor-2 kinase activity
GO:0005524 F ATP binding
GO:0005783 C endoplasmic reticulum
GO:0005788 C endoplasmic reticulum lumen
GO:0005789 C endoplasmic reticulum membrane
GO:0006417 P regulation of translation
GO:0006468 P protein phosphorylation
GO:0006983 P ER overload response
GO:0006986 P response to unfolded protein
GO:0010389 P regulation of G2/M transition of mitotic cell cycle
GO:0010508 P positive regulation of autophagy
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0017148 P negative regulation of translation
FPKM:12.54 TPM:13.74
819 A_BomoFB_comp10191_c0_seq2
2221bp
 PREDICTED:_eukaryotic_translation_initiation_factor_2-alpha_kinase-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004686 F elongation factor-2 kinase activity
GO:0005524 F ATP binding
GO:0005783 C endoplasmic reticulum
GO:0005788 C endoplasmic reticulum lumen
GO:0005789 C endoplasmic reticulum membrane
GO:0006417 P regulation of translation
GO:0006468 P protein phosphorylation
GO:0006983 P ER overload response
GO:0006986 P response to unfolded protein
GO:0010389 P regulation of G2/M transition of mitotic cell cycle
GO:0010508 P positive regulation of autophagy
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0017148 P negative regulation of translation
FPKM:1.24 TPM:1.36
820 A_BomoFB_comp101925_c0_seq1
1254bp
 CRAL-TRIO_domain-containing_protein,_partial_[Manduca_sexta]
GO:0003674 F molecular_function
GO:0005215 F transporter activity
GO:0005622 C intracellular anatomical structure
GO:0006810 P transport
GO:0008150 P biological_process
GO:0016020 C membrane
FPKM:3.65 TPM:4.00
821 A_BomoFB_comp10192_c0_seq1
1286bp
 C-type_lectin_21_precursor_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0030246 F carbohydrate binding
FPKM:292.65 TPM:320.67
822 A_BomoFB_comp10192_c0_seq2
1097bp
 C-type_lectin_19_precursor_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0030246 F carbohydrate binding
FPKM:167.53 TPM:183.57
823 A_BomoFB_comp10193_c0_seq1
3354bp
 PREDICTED:_U3_small_nucleolar_RNA-associated_protein_14_homolog_A_[Amyelois_transitella]
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0030490 P maturation of SSU-rRNA
GO:0032040 C small-subunit processome
GO:0042254 P ribosome biogenesis
FPKM:3.50 TPM:3.84
824 A_BomoFB_comp10193_c0_seq2
3763bp
 PREDICTED:_U3_small_nucleolar_RNA-associated_protein_14_homolog_A_[Amyelois_transitella]
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0030490 P maturation of SSU-rRNA
GO:0032040 C small-subunit processome
GO:0042254 P ribosome biogenesis
FPKM:6.22 TPM:6.82
825 A_BomoFB_comp10194_c0_seq1
2458bp
 hypothetical_protein_KGM_07091_[Danaus_plexippus]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:6.22 TPM:6.82
826 A_BomoFB_comp10194_c0_seq2
2535bp
 hypothetical_protein_KGM_07091_[Danaus_plexippus]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:1.35 TPM:1.47
827 A_BomoFB_comp10195_c0_seq1
1425bp
 PREDICTED:_uncharacterized_protein_LOC101745102_isoform_X6_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008150 P biological_process
GO:0017137 F small GTPase binding
GO:0031410 C cytoplasmic vesicle
GO:0070062 C extracellular exosome
FPKM:0.39 TPM:0.42
828 A_BomoFB_comp10195_c0_seq2
4401bp
 PREDICTED:_uncharacterized_protein_LOC101745102_isoform_X5_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008150 P biological_process
GO:0017137 F small GTPase binding
GO:0031410 C cytoplasmic vesicle
GO:0070062 C extracellular exosome
FPKM:6.75 TPM:7.39
829 A_BomoFB_comp10195_c0_seq3
4733bp
 PREDICTED:_uncharacterized_protein_LOC101745102_isoform_X5_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008150 P biological_process
GO:0017137 F small GTPase binding
GO:0031410 C cytoplasmic vesicle
GO:0070062 C extracellular exosome
FPKM:5.39 TPM:5.91
830 A_BomoFB_comp10196_c0_seq1
1359bp
 PREDICTED:_restin_homolog_isoform_X3_[Bombyx_mori]
FPKM:0.00 TPM:0.00
831 A_BomoFB_comp10196_c0_seq10
5770bp
 PREDICTED:_restin_homolog_isoform_X5_[Bombyx_mori]
GO:0000776 C kinetochore
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0005876 C spindle microtubule
GO:0007017 P microtubule-based process
GO:0007349 P cellularization
GO:0008017 F microtubule binding
GO:0030424 C axon
GO:0035371 C microtubule plus-end
GO:0044295 C axonal growth cone
GO:0045169 C fusome
GO:0051010 F microtubule plus-end binding
GO:0070854 F myosin VI heavy chain binding
FPKM:0.84 TPM:0.92
832 A_BomoFB_comp10196_c0_seq11
6063bp
 PREDICTED:_restin_homolog_isoform_X2_[Bombyx_mori]
GO:0000776 C kinetochore
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0005876 C spindle microtubule
GO:0007017 P microtubule-based process
GO:0007349 P cellularization
GO:0008017 F microtubule binding
GO:0030424 C axon
GO:0035371 C microtubule plus-end
GO:0044295 C axonal growth cone
GO:0045169 C fusome
GO:0051010 F microtubule plus-end binding
GO:0070854 F myosin VI heavy chain binding
FPKM:0.00 TPM:0.01
833 A_BomoFB_comp10196_c0_seq12
2736bp
 PREDICTED:_restin_homolog_isoform_X4_[Bombyx_mori]
GO:0000776 C kinetochore
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0005876 C spindle microtubule
GO:0007017 P microtubule-based process
GO:0007349 P cellularization
GO:0008017 F microtubule binding
GO:0030424 C axon
GO:0035371 C microtubule plus-end
GO:0044295 C axonal growth cone
GO:0045169 C fusome
GO:0051010 F microtubule plus-end binding
GO:0070854 F myosin VI heavy chain binding
FPKM:2.28 TPM:2.50
834 A_BomoFB_comp10196_c0_seq13
991bp
 PREDICTED:_restin_homolog_isoform_X5_[Bombyx_mori]
FPKM:0.86 TPM:0.95
835 A_BomoFB_comp10196_c0_seq14
2901bp
 PREDICTED:_restin_homolog_isoform_X1_[Bombyx_mori]
GO:0000776 C kinetochore
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0005876 C spindle microtubule
GO:0007017 P microtubule-based process
GO:0007349 P cellularization
GO:0008017 F microtubule binding
GO:0030424 C axon
GO:0035371 C microtubule plus-end
GO:0044295 C axonal growth cone
GO:0045169 C fusome
GO:0051010 F microtubule plus-end binding
GO:0070854 F myosin VI heavy chain binding
FPKM:0.43 TPM:0.48
836 A_BomoFB_comp10196_c0_seq15
863bp
 PREDICTED:_restin_homolog_isoform_X8_[Bombyx_mori]
FPKM:1.01 TPM:1.10
837 A_BomoFB_comp10196_c0_seq16
2533bp
 PREDICTED:_restin_homolog_isoform_X5_[Bombyx_mori]
GO:0000776 C kinetochore
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0005876 C spindle microtubule
GO:0007017 P microtubule-based process
GO:0007349 P cellularization
GO:0008017 F microtubule binding
GO:0030424 C axon
GO:0035371 C microtubule plus-end
GO:0044295 C axonal growth cone
GO:0045169 C fusome
GO:0051010 F microtubule plus-end binding
GO:0070854 F myosin VI heavy chain binding
FPKM:2.58 TPM:2.83
838 A_BomoFB_comp10196_c0_seq17
5695bp
 PREDICTED:_restin_homolog_isoform_X7_[Bombyx_mori]
GO:0000776 C kinetochore
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0005876 C spindle microtubule
GO:0007017 P microtubule-based process
GO:0007349 P cellularization
GO:0008017 F microtubule binding
GO:0030424 C axon
GO:0035371 C microtubule plus-end
GO:0044295 C axonal growth cone
GO:0045169 C fusome
GO:0051010 F microtubule plus-end binding
GO:0070854 F myosin VI heavy chain binding
FPKM:3.47 TPM:3.80
839 A_BomoFB_comp10196_c0_seq2
6138bp
 PREDICTED:_restin_homolog_isoform_X1_[Bombyx_mori]
GO:0000776 C kinetochore
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0005876 C spindle microtubule
GO:0007017 P microtubule-based process
GO:0007349 P cellularization
GO:0008017 F microtubule binding
GO:0030424 C axon
GO:0035371 C microtubule plus-end
GO:0044295 C axonal growth cone
GO:0045169 C fusome
GO:0051010 F microtubule plus-end binding
GO:0070854 F myosin VI heavy chain binding
FPKM:0.09 TPM:0.10
840 A_BomoFB_comp10196_c0_seq3
2458bp
 PREDICTED:_restin_homolog_isoform_X7_[Bombyx_mori]
GO:0000776 C kinetochore
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0005876 C spindle microtubule
GO:0007017 P microtubule-based process
GO:0007349 P cellularization
GO:0008017 F microtubule binding
GO:0030424 C axon
GO:0035371 C microtubule plus-end
GO:0044295 C axonal growth cone
GO:0045169 C fusome
GO:0051010 F microtubule plus-end binding
GO:0070854 F myosin VI heavy chain binding
FPKM:7.77 TPM:8.51
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