SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search Assembled RNA-Seq

previous next from show/35635
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
6031 A_BomoFB_comp1237_c0_seq1
251bp
FPKM:0.00 TPM:0.00
6032 A_BomoFB_comp123804_c0_seq1
518bp
FPKM:0.65 TPM:0.71
6033 A_BomoFB_comp123862_c0_seq1
993bp
FPKM:2.21 TPM:2.42
6034 A_BomoFB_comp123871_c0_seq1
736bp
 PREDICTED:_uncharacterized_protein_LOC105841360_[Bombyx_mori]
FPKM:3.34 TPM:3.66
6035 A_BomoFB_comp123892_c0_seq1
1183bp
 putative_glutamine-dependent_NAD(+)_synthetase_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0003952 F NAD+ synthase (glutamine-hydrolyzing) activity
GO:0004359 F glutaminase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006807 P nitrogen compound metabolic process
GO:0009435 P NAD biosynthetic process
GO:0016810 F hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
GO:0016874 F ligase activity
FPKM:2.77 TPM:3.03
6036 A_BomoFB_comp1238_c0_seq1
312bp
 PREDICTED:_tyrosine-protein_phosphatase_CDC14_homolog_[Bombyx_mori]
FPKM:1.67 TPM:1.83
6037 A_BomoFB_comp123927_c0_seq1
335bp
 hypothetical_protein_MVEG_04459_[Mortierella_verticillata_NRRL_6337]
FPKM:4.27 TPM:4.68
6038 A_BomoFB_comp123935_c0_seq1
1727bp
FPKM:1.90 TPM:2.08
6039 A_BomoFB_comp12394_c0_seq1
1860bp
 PREDICTED:_iron-sulfur_cluster_assembly_2_homolog,_mitochondrial_[Amyelois_transitella]
GO:0005198 F structural molecule activity
GO:0005739 C mitochondrion
GO:0016226 P iron-sulfur cluster assembly
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
FPKM:46.50 TPM:50.95
6040 A_BomoFB_comp123976_c0_seq1
214bp
FPKM:4.04 TPM:4.43
6041 A_BomoFB_comp12397_c0_seq1
766bp
 16_kDa_salivary_protein_[Danaus_plexippus]
GO:0005783 C endoplasmic reticulum
GO:0005784 C Sec61 translocon complex
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0070062 C extracellular exosome
FPKM:130.19 TPM:142.65
6042 A_BomoFB_comp12399_c0_seq1
741bp
 H+_transporting_ATP_synthase_delta_subunit_[Bombyx_mori]
GO:0000275 C mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1)
GO:0005739 C mitochondrion
GO:0005740 C mitochondrial envelope
GO:0005743 C mitochondrial inner membrane
GO:0005753 C mitochondrial proton-transporting ATP synthase complex
GO:0006754 P ATP biosynthetic process
GO:0006810 P transport
GO:0006811 P ion transport
GO:0015078 F proton transmembrane transporter activity
GO:0015986 P ATP synthesis coupled proton transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016887 F ATP hydrolysis activity
GO:0045259 C proton-transporting ATP synthase complex
GO:0045261 C proton-transporting ATP synthase complex, catalytic core F(1)
GO:0046933 F proton-transporting ATP synthase activity, rotational mechanism
GO:0046961 F proton-transporting ATPase activity, rotational mechanism
FPKM:167.15 TPM:183.15
6043 A_BomoFB_comp123_c0_seq1
384bp
 Nuclear_fragile_X_mental_retardation-interacting_protein_1_[Papilio_xuthus]
FPKM:0.54 TPM:0.59
6044 A_BomoFB_comp124004_c0_seq1
613bp
 PREDICTED:_uncharacterized_protein_LOC101745257_[Bombyx_mori]
FPKM:3.03 TPM:3.32
6045 A_BomoFB_comp124035_c0_seq1
343bp
 acetyl-coenzyme_A_synthetase_[Protochlamydia_naegleriophila]
FPKM:1.35 TPM:1.48
6046 A_BomoFB_comp12409_c0_seq1
426bp
 PREDICTED:_cytochrome_c_oxidase_subunit_6C_[Papilio_xuthus]
GO:0004129 F cytochrome-c oxidase activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:1902600 P proton transmembrane transport
FPKM:159.46 TPM:174.72
6047 A_BomoFB_comp124179_c0_seq1
522bp
FPKM:1.92 TPM:2.11
6048 A_BomoFB_comp12418_c0_seq1
700bp
 cytochrome_c_oxidase_polypeptide_Vb_[Bombyx_mori]
GO:0004129 F cytochrome-c oxidase activity
GO:0005739 C mitochondrion
GO:0005740 C mitochondrial envelope
GO:0005743 C mitochondrial inner membrane
GO:0016020 C membrane
GO:0046872 F metal ion binding
GO:1902600 P proton transmembrane transport
FPKM:135.04 TPM:147.97
6049 A_BomoFB_comp124211_c0_seq1
982bp
 PREDICTED:_uncharacterized_protein_LOC106712217_isoform_X2_[Papilio_machaon]
FPKM:2.04 TPM:2.23
6050 A_BomoFB_comp124332_c0_seq1
657bp
FPKM:2.52 TPM:2.76
6051 A_BomoFB_comp124351_c0_seq1
484bp
 endo-1,4-beta-xylanase_[Rhizobium_sp._CCGE_510]
FPKM:3.07 TPM:3.36
6052 A_BomoFB_comp124359_c0_seq1
926bp
 PREDICTED:_axin_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006909 P phagocytosis
GO:0007275 P multicellular organism development
GO:0007447 P imaginal disc pattern formation
GO:0007455 P eye-antennal disc morphogenesis
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007507 P heart development
GO:0008013 F beta-catenin binding
GO:0010941 P regulation of cell death
GO:0016055 P Wnt signaling pathway
GO:0019901 F protein kinase binding
GO:0030178 P negative regulation of Wnt signaling pathway
GO:0035019 P somatic stem cell population maintenance
GO:0042594 P response to starvation
GO:0043547 P positive regulation of GTPase activity
GO:0048477 P oogenesis
FPKM:2.92 TPM:3.20
6053 A_BomoFB_comp124366_c0_seq1
563bp
 hypothetical_protein_[Massilia_sp._NR_4-1]
FPKM:2.14 TPM:2.35
6054 A_BomoFB_comp124381_c0_seq1
421bp
 PREDICTED:_phosphatidylinositol_4-kinase_alpha_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004430 F 1-phosphatidylinositol 4-kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0030660 C Golgi-associated vesicle membrane
GO:0046854 P phosphatidylinositol phosphate biosynthetic process
GO:0048015 P phosphatidylinositol-mediated signaling
FPKM:3.65 TPM:4.00
6055 A_BomoFB_comp124385_c0_seq1
376bp
 PREDICTED:_uncharacterized_protein_LOC105841802_[Bombyx_mori]
FPKM:2.81 TPM:3.08
6056 A_BomoFB_comp124391_c0_seq1
1639bp
 UDP-glycosyltransferase_UGT33D8_[Bombyx_mori]
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016758 F hexosyltransferase activity
FPKM:2.09 TPM:2.29
6057 A_BomoFB_comp12439_c0_seq1
1641bp
 PREDICTED:_acetoacetyl-CoA_thiolase_isoform_X1_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0003985 F acetyl-CoA C-acetyltransferase activity
GO:0005739 C mitochondrion
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0016747 F acyltransferase activity, transferring groups other than amino-acyl groups
GO:0046872 F metal ion binding
FPKM:131.78 TPM:144.40
6058 A_BomoFB_comp124439_c0_seq1
736bp
 PREDICTED:_FERM,_RhoGEF_and_pleckstrin_domain-containing_protein_1-like_isoform_X3_[Bombyx_mori]
FPKM:3.44 TPM:3.77
6059 A_BomoFB_comp124481_c0_seq1
1360bp
 PREDICTED:_calcineurin-binding_protein_cabin-1-like_[Papilio_machaon]
FPKM:2.95 TPM:3.23
6060 A_BomoFB_comp124515_c0_seq1
1058bp
 PREDICTED:_insulin_receptor_substrate_1-B,_partial_[Bombyx_mori]
GO:0004871 F obsolete signal transducer activity
GO:0005158 F insulin receptor binding
GO:0005159 F insulin-like growth factor receptor binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0007165 P signal transduction
GO:0042169 F SH2 domain binding
GO:0043231 C intracellular membrane-bounded organelle
GO:0043548 F phosphatidylinositol 3-kinase binding
GO:0048009 P insulin-like growth factor receptor signaling pathway
FPKM:1.86 TPM:2.04
previous next from show/35635

- SilkBase 1999-2023 -