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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
5671 A_BomoFB_comp117468_c0_seq1
410bp
FPKM:1.20 TPM:1.31
5672 A_BomoFB_comp117474_c0_seq1
989bp
FPKM:1.62 TPM:1.77
5673 A_BomoFB_comp117497_c0_seq1
340bp
FPKM:3.10 TPM:3.40
5674 A_BomoFB_comp117509_c0_seq1
359bp
 hypothetical_protein_L798_05633_[Zootermopsis_nevadensis]
FPKM:2.15 TPM:2.36
5675 A_BomoFB_comp117512_c0_seq1
207bp
 PREDICTED:_uncharacterized_protein_LOC105390745_[Plutella_xylostella]
FPKM:0.00 TPM:0.00
5676 A_BomoFB_comp117557_c0_seq1
547bp
 MULTISPECIES:_membrane_protein_[Hydrogenophaga]
FPKM:3.28 TPM:3.60
5677 A_BomoFB_comp11755_c0_seq1
1953bp
 PREDICTED:_sugar_transporter_4_isoform_X1_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015574 F trehalose transmembrane transporter activity
GO:0015767 P lactose transport
GO:0015768 P maltose transport
GO:0015770 P sucrose transport
GO:0015771 P trehalose transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
FPKM:192.79 TPM:211.25
5678 A_BomoFB_comp117568_c0_seq1
3371bp
 PREDICTED:_focadhesin_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005925 C focal adhesion
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
FPKM:1.77 TPM:1.94
5679 A_BomoFB_comp11759_c0_seq1
904bp
 ATP_synthase_[Bombyx_mori]
GO:0000276 C mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005811 C lipid droplet
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006909 P phagocytosis
GO:0015078 F proton transmembrane transporter activity
GO:0015986 P ATP synthesis coupled proton transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0045263 C proton-transporting ATP synthase complex, coupling factor F(o)
GO:0046933 F proton-transporting ATP synthase activity, rotational mechanism
FPKM:183.52 TPM:201.08
5680 A_BomoFB_comp117609_c0_seq1
420bp
FPKM:2.98 TPM:3.26
5681 A_BomoFB_comp117636_c0_seq1
774bp
 ABC_transporter_ATP-binding_protein_[Enterococcus_gallinarum]
FPKM:2.85 TPM:3.12
5682 A_BomoFB_comp1176879_c0_seq1
218bp
 PREDICTED:_protein_unc-80_homolog_[Bombyx_mori]
GO:0005261 F cation channel activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034703 C cation channel complex
GO:0045475 P locomotor rhythm
GO:0055080 P cation homeostasis
GO:0098655 P cation transmembrane transport
FPKM:1.25 TPM:1.37
5683 A_BomoFB_comp117708_c0_seq1
481bp
FPKM:2.73 TPM:2.99
5684 A_BomoFB_comp117785_c0_seq1
801bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:2.37 TPM:2.60
5685 A_BomoFB_comp117806_c0_seq1
1852bp
 PREDICTED:_synaptic_vesicle_glycoprotein_2C-like_isoform_X2_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0006810 P transport
GO:0006836 P neurotransmitter transport
GO:0007268 P chemical synaptic transmission
GO:0008021 C synaptic vesicle
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0030054 C cell junction
GO:0030672 C synaptic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0045202 C synapse
GO:0055085 P transmembrane transport
FPKM:2.44 TPM:2.67
5686 A_BomoFB_comp117819_c0_seq1
536bp
 PREDICTED:_myosin-IB-like,_partial_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005903 C brush border
GO:0005938 C cell cortex
GO:0007368 P determination of left/right symmetry
GO:0007498 P mesoderm development
GO:0008152 P metabolic process
GO:0016459 C myosin complex
GO:0031941 C filamentous actin
GO:0032528 P microvillus organization
GO:0042623 F ATP hydrolysis activity
GO:0042742 P defense response to bacterium
GO:0048803 P imaginal disc-derived male genitalia morphogenesis
GO:0071907 P determination of digestive tract left/right asymmetry
FPKM:3.38 TPM:3.71
5687 A_BomoFB_comp117894_c0_seq1
954bp
 PREDICTED:_probable_ATP-dependent_RNA_helicase_kurz_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0008026 F helicase activity
GO:0016787 F hydrolase activity
GO:0022008 P neurogenesis
GO:0044822 F RNA binding
FPKM:3.73 TPM:4.09
5688 A_BomoFB_comp1179_c0_seq1
638bp
 PREDICTED:_probable_E3_ubiquitin-protein_ligase_HERC2_[Amyelois_transitella]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005814 C centriole
GO:0005856 C cytoskeleton
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043547 P positive regulation of GTPase activity
GO:0046872 F metal ion binding
FPKM:1.19 TPM:1.31
5689 A_BomoFB_comp11821_c0_seq1
867bp
 putative_fatbody_protein_3Rev-G1_precursor_[Bombyx_mori]
GO:0005576 C extracellular region
FPKM:137.79 TPM:150.98
5690 A_BomoFB_comp118254_c0_seq1
397bp
FPKM:1.52 TPM:1.67
5691 A_BomoFB_comp11826_c0_seq1
679bp
 odorant-binding_protein_11_[Cnaphalocrocis_medinalis]
GO:0005549 F odorant binding
GO:0005576 C extracellular region
GO:0006810 P transport
GO:0007608 P sensory perception of smell
GO:0050896 P response to stimulus
FPKM:165.83 TPM:181.70
5692 A_BomoFB_comp1182_c0_seq1
266bp
 electron_transporter_[Algibacter_lectus]
FPKM:0.63 TPM:0.69
5693 A_BomoFB_comp118341_c0_seq1
556bp
FPKM:2.91 TPM:3.19
5694 A_BomoFB_comp118348_c0_seq1
774bp
 PREDICTED:_uncharacterized_protein_LOC101742185_isoform_X2_[Bombyx_mori]
FPKM:3.40 TPM:3.72
5695 A_BomoFB_comp118426_c0_seq1
418bp
FPKM:3.93 TPM:4.30
5696 A_BomoFB_comp118431_c0_seq1
224bp
FPKM:0.00 TPM:0.00
5697 A_BomoFB_comp118442_c0_seq1
237bp
FPKM:1.83 TPM:2.00
5698 A_BomoFB_comp118481_c0_seq1
799bp
 PREDICTED:_uncharacterized_protein_LOC106119694_[Papilio_xuthus]
FPKM:2.82 TPM:3.09
5699 A_BomoFB_comp118513_c0_seq1
595bp
FPKM:3.03 TPM:3.32
5700 A_BomoFB_comp118515_c0_seq1
1046bp
FPKM:3.02 TPM:3.31
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