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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
5641 A_BomoFB_comp116745_c0_seq1
707bp
 PREDICTED:_negative_elongation_factor_E_[Amyelois_transitella]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0007070 P obsolete negative regulation of transcription from RNA polymerase II promoter during mitotic cell cycle
GO:0008023 C transcription elongation factor complex
GO:0017053 C transcription repressor complex
GO:0022008 P neurogenesis
GO:0032021 C NELF complex
GO:0032785 P negative regulation of DNA-templated transcription, elongation
GO:0034244 P negative regulation of transcription elongation from RNA polymerase II promoter
GO:0045944 P positive regulation of transcription by RNA polymerase II
FPKM:3.83 TPM:4.20
5642 A_BomoFB_comp116751_c0_seq1
406bp
FPKM:2.19 TPM:2.40
5643 A_BomoFB_comp116758_c0_seq1
782bp
 PREDICTED:_MAGUK_p55_subfamily_member_6_[Bombyx_mori]
GO:0004385 F guanylate kinase activity
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030165 F PDZ domain binding
GO:0046037 P GMP metabolic process
GO:0046710 P GDP metabolic process
GO:0070062 C extracellular exosome
FPKM:3.99 TPM:4.37
5644 A_BomoFB_comp116779_c0_seq1
987bp
 C-Cbl-associated_protein_isoform_A_[Operophtera_brumata]
FPKM:2.43 TPM:2.66
5645 A_BomoFB_comp116813_c0_seq1
1246bp
FPKM:1.53 TPM:1.68
5646 A_BomoFB_comp116814_c0_seq1
1594bp
 PREDICTED:_polypeptide_N-acetylgalactosaminyltransferase_2-like_[Amyelois_transitella]
GO:0000139 C Golgi membrane
GO:0004653 F polypeptide N-acetylgalactosaminyltransferase activity
GO:0005794 C Golgi apparatus
GO:0005795 C Golgi stack
GO:0006486 P protein glycosylation
GO:0009312 P oligosaccharide biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030246 F carbohydrate binding
GO:0046872 F metal ion binding
FPKM:2.39 TPM:2.61
5647 A_BomoFB_comp11686_c0_seq1
3507bp
 PREDICTED:_alpha-aminoadipic_semialdehyde_synthase,_mitochondrial_[Papilio_polytes]
GO:0003824 F catalytic activity
GO:0005739 C mitochondrion
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0033512 P L-lysine catabolic process to acetyl-CoA via saccharopine
GO:0047130 F saccharopine dehydrogenase (NADP+, L-lysine-forming) activity
GO:0047131 F saccharopine dehydrogenase (NAD+, L-glutamate-forming) activity
GO:0055114 P obsolete oxidation-reduction process
FPKM:162.03 TPM:177.54
5648 A_BomoFB_comp116911_c0_seq1
695bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:2.76 TPM:3.02
5649 A_BomoFB_comp116925_c0_seq1
529bp
 PREDICTED:_rab5_GDP/GTP_exchange_factor_[Bombyx_mori]
GO:0001933 P negative regulation of protein phosphorylation
GO:0002686 P negative regulation of leukocyte migration
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0006612 P protein targeting to membrane
GO:0006810 P transport
GO:0006897 P endocytosis
GO:0008270 F zinc ion binding
GO:0015031 P protein transport
GO:0016567 P protein ubiquitination
GO:0017112 F guanyl-nucleotide exchange factor activity
GO:0017137 F small GTPase binding
GO:0031982 C vesicle
GO:0033004 P negative regulation of mast cell activation
GO:0043305 P negative regulation of mast cell degranulation
GO:0043547 P positive regulation of GTPase activity
GO:0046580 P negative regulation of Ras protein signal transduction
GO:0046872 F metal ion binding
GO:0048261 P negative regulation of receptor-mediated endocytosis
GO:0050728 P negative regulation of inflammatory response
GO:0055037 C recycling endosome
GO:0060368 P regulation of Fc receptor mediated stimulatory signaling pathway
GO:0061630 F ubiquitin protein ligase activity
GO:1900165 P negative regulation of interleukin-6 production
GO:1900235 P negative regulation of Kit signaling pathway
FPKM:3.61 TPM:3.95
5650 A_BomoFB_comp116937_c0_seq1
626bp
FPKM:2.94 TPM:3.22
5651 A_BomoFB_comp116984_c0_seq1
215bp
FPKM:2.64 TPM:2.89
5652 A_BomoFB_comp11699_c0_seq1
2412bp
 PREDICTED:_facilitated_trehalose_transporter_Tret1-like_isoform_X2_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015574 F trehalose transmembrane transporter activity
GO:0015771 P trehalose transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
FPKM:169.09 TPM:185.27
5653 A_BomoFB_comp1169_c0_seq1
311bp
FPKM:0.84 TPM:0.92
5654 A_BomoFB_comp116_c0_seq1
390bp
 PREDICTED:_uncharacterized_protein_LOC106100155_[Papilio_polytes]
FPKM:0.26 TPM:0.29
5655 A_BomoFB_comp1170150_c0_seq1
202bp
FPKM:0.00 TPM:0.00
5656 A_BomoFB_comp11704_c0_seq1
875bp
 FK506-binding_protein_[Bombyx_mori]
GO:0000413 P protein peptidyl-prolyl isomerization
GO:0003755 F peptidyl-prolyl cis-trans isomerase activity
GO:0005528 F FK506 binding
GO:0005737 C cytoplasm
GO:0005789 C endoplasmic reticulum membrane
GO:0005829 C cytosol
GO:0006457 P protein folding
GO:0008152 P metabolic process
GO:0016853 F isomerase activity
GO:0042110 P T cell activation
GO:0061077 P chaperone-mediated protein folding
FPKM:123.18 TPM:134.97
5657 A_BomoFB_comp117098_c0_seq1
623bp
 PREDICTED:_tyrosine-protein_kinase_Btk29A_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004715 F non-membrane spanning protein tyrosine kinase activity
GO:0005102 F signaling receptor binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007254 P JNK cascade
GO:0007300 P ovarian nurse cell to oocyte transport
GO:0007301 P female germline ring canal formation
GO:0007349 P cellularization
GO:0007391 P dorsal closure
GO:0007424 P open tracheal system development
GO:0007435 P salivary gland morphogenesis
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007485 P imaginal disc-derived male genitalia development
GO:0007619 P courtship behavior
GO:0008258 P head involution
GO:0008340 P determination of adult lifespan
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0030036 P actin cytoskeleton organization
GO:0030717 P oocyte karyosome formation
GO:0030723 P ovarian fusome organization
GO:0030833 P regulation of actin filament polymerization
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0035277 P spiracle morphogenesis, open tracheal system
GO:0035556 P intracellular signal transduction
GO:0038083 P peptidyl-tyrosine autophosphorylation
GO:0042023 P DNA endoreduplication
GO:0042127 P regulation of cell population proliferation
GO:0044719 P regulation of imaginal disc-derived wing size
GO:0045087 P innate immune response
GO:0045172 C germline ring canal
GO:0045177 C apical part of cell
GO:0046872 F metal ion binding
GO:0046960 P sensitization
GO:0048477 P oogenesis
GO:0071944 C cell periphery
FPKM:2.47 TPM:2.70
5658 A_BomoFB_comp1170_c0_seq1
287bp
 amino_acid_transporter_[Chryseobacterium_jeonii]
FPKM:1.03 TPM:1.12
5659 A_BomoFB_comp117109_c0_seq1
535bp
FPKM:3.39 TPM:3.72
5660 A_BomoFB_comp117146_c0_seq1
793bp
 DCMP_deaminase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004132 F dCMP deaminase activity
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0006220 P pyrimidine nucleotide metabolic process
GO:0008152 P metabolic process
GO:0008270 F zinc ion binding
GO:0009165 P nucleotide biosynthetic process
GO:0016787 F hydrolase activity
GO:0046134 P pyrimidine nucleoside biosynthetic process
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
FPKM:2.35 TPM:2.57
5661 A_BomoFB_comp117172_c0_seq1
538bp
 Trypsin_theta_[Operophtera_brumata]
GO:0004252 F serine-type endopeptidase activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0006508 P proteolysis
GO:0007586 P digestion
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016787 F hydrolase activity
FPKM:2.75 TPM:3.02
5662 A_BomoFB_comp117178_c0_seq1
431bp
 hypothetical_protein_AAULR_07691_[Lactobacillus_rhamnosus_MTCC_5462]
FPKM:3.50 TPM:3.84
5663 A_BomoFB_comp117187_c0_seq1
917bp
 hypothetical_protein_KGM_11768_[Danaus_plexippus]
GO:0000151 C ubiquitin ligase complex
GO:0003674 F molecular_function
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0008150 P biological_process
GO:0031624 F ubiquitin conjugating enzyme binding
GO:0032182 F ubiquitin-like protein binding
GO:0045116 P protein neddylation
GO:0051443 P positive regulation of ubiquitin-protein transferase activity
GO:0097602 F cullin family protein binding
FPKM:2.96 TPM:3.24
5664 A_BomoFB_comp1172002_c0_seq1
208bp
 hypothetical_protein_RR46_06606_[Papilio_xuthus]
FPKM:1.52 TPM:1.67
5665 A_BomoFB_comp117201_c0_seq1
336bp
 putative_uncharacterized_protein_[Firmicutes_bacterium_CAG:882]
FPKM:2.47 TPM:2.71
5666 A_BomoFB_comp117209_c0_seq1
293bp
 glycoprotein_[Prochlorococcus_marinus]
FPKM:1.46 TPM:1.60
5667 A_BomoFB_comp117298_c0_seq1
364bp
FPKM:1.50 TPM:1.64
5668 A_BomoFB_comp117302_c0_seq1
360bp
 hypothetical_protein_RR46_03775_[Papilio_xuthus]
FPKM:3.06 TPM:3.35
5669 A_BomoFB_comp11741_c0_seq1
2613bp
 PREDICTED:_four_and_a_half_LIM_domains_protein_2-like_isoform_X3_[Amyelois_transitella]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001649 P osteoblast differentiation
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005925 C focal adhesion
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0008134 F transcription factor binding
GO:0008270 F zinc ion binding
GO:0009725 P response to hormone
GO:0015629 C actin cytoskeleton
GO:0042802 F identical protein binding
GO:0043066 P negative regulation of apoptotic process
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0055014 P atrial cardiac muscle cell development
GO:0055015 P ventricular cardiac muscle cell development
GO:0060347 P heart trabecula formation
FPKM:133.81 TPM:146.62
5670 A_BomoFB_comp11745_c0_seq1
1142bp
 Bax_inhibitor-1-like_protein_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006915 P apoptotic process
GO:0006986 P response to unfolded protein
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0043066 P negative regulation of apoptotic process
FPKM:145.24 TPM:159.14
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