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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
5581 A_BomoFB_comp115775_c0_seq1
1078bp
 PREDICTED:_TBC1_domain_family_member_14-like_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005776 C autophagosome
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006886 P intracellular protein transport
GO:0010507 P negative regulation of autophagy
GO:0017137 F small GTPase binding
GO:0019901 F protein kinase binding
GO:0031338 P regulation of vesicle fusion
GO:0055037 C recycling endosome
GO:0071955 P recycling endosome to Golgi transport
GO:0090630 P activation of GTPase activity
GO:2000785 P regulation of autophagosome assembly
FPKM:2.55 TPM:2.79
5582 A_BomoFB_comp1157_c0_seq1
266bp
 PREDICTED:_uncharacterized_protein_LOC106713229_[Papilio_machaon]
FPKM:2.53 TPM:2.77
5583 A_BomoFB_comp115808_c0_seq1
1364bp
FPKM:2.34 TPM:2.57
5584 A_BomoFB_comp115840_c0_seq1
1132bp
FPKM:2.75 TPM:3.01
5585 A_BomoFB_comp115855_c0_seq1
558bp
FPKM:2.46 TPM:2.70
5586 A_BomoFB_comp115862_c0_seq1
716bp
 PREDICTED:_WD_repeat-containing_protein_44_isoform_X5_[Papilio_xuthus]
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0010008 C endosome membrane
GO:0016020 C membrane
GO:0048471 C perinuclear region of cytoplasm
FPKM:2.95 TPM:3.24
5587 A_BomoFB_comp115874_c0_seq1
662bp
 PREDICTED:_tRNA:m(4)X_modification_enzyme_TRM13_homolog_isoform_X2_[Bombyx_mori]
GO:0008033 P tRNA processing
GO:0008168 F methyltransferase activity
GO:0008175 F tRNA methyltransferase activity
GO:0016740 F transferase activity
GO:0030488 P tRNA methylation
GO:0032259 P methylation
GO:0046872 F metal ion binding
FPKM:3.29 TPM:3.60
5588 A_BomoFB_comp115924_c0_seq1
1295bp
 sulfotransferase_[Bombyx_mori]
GO:0004304 F estrone sulfotransferase activity
GO:0005496 F steroid binding
GO:0005737 C cytoplasm
GO:0008146 F sulfotransferase activity
GO:0008210 P estrogen metabolic process
GO:0008289 F lipid binding
GO:0016740 F transferase activity
GO:0050294 F steroid sulfotransferase activity
FPKM:2.59 TPM:2.84
5589 A_BomoFB_comp115957_c0_seq1
488bp
FPKM:3.20 TPM:3.51
5590 A_BomoFB_comp115967_c0_seq1
578bp
FPKM:3.57 TPM:3.92
5591 A_BomoFB_comp115968_c0_seq1
523bp
FPKM:2.40 TPM:2.62
5592 A_BomoFB_comp11597_c0_seq1
600bp
 cytochrome_c_oxidase_subunit_6A1,_mitochondrial-like_[Bombyx_mori]
GO:0004129 F cytochrome-c oxidase activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005751 C mitochondrial respiratory chain complex IV
GO:0016020 C membrane
GO:0043209 C myelin sheath
GO:1902600 P proton transmembrane transport
FPKM:167.56 TPM:183.60
5593 A_BomoFB_comp115_c0_seq1
604bp
 transient_receptor_potential_cation_channel_protein_painless_[Bombyx_mori]
FPKM:0.90 TPM:0.99
5594 A_BomoFB_comp115_c1_seq1
221bp
 transient_receptor_potential_cation_channel_protein_painless_[Bombyx_mori]
FPKM:2.36 TPM:2.59
5595 A_BomoFB_comp116021_c0_seq1
316bp
 PREDICTED:_probable_polyamine_oxidase_5_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006596 P polyamine biosynthetic process
GO:0006598 P polyamine catabolic process
GO:0016491 F oxidoreductase activity
GO:0046208 P spermine catabolic process
GO:0046592 F polyamine oxidase activity
GO:0052894 F norspermine:oxygen oxidoreductase activity
GO:0052895 F N1-acetylspermine:oxygen oxidoreductase (N1-acetylspermidine-forming) activity
GO:0052901 F spermine:oxygen oxidoreductase (spermidine-forming) activity
GO:0055114 P obsolete oxidation-reduction process
FPKM:2.43 TPM:2.66
5596 A_BomoFB_comp116025_c0_seq1
965bp
 Methyltransferase-like_protein_22_[Operophtera_brumata]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0008150 P biological_process
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0043231 C intracellular membrane-bounded organelle
FPKM:3.12 TPM:3.42
5597 A_BomoFB_comp116030_c0_seq1
508bp
 PREDICTED:_dmX-like_protein_2_[Bombyx_mori]
FPKM:3.67 TPM:4.03
5598 A_BomoFB_comp116080_c0_seq1
215bp
FPKM:2.64 TPM:2.89
5599 A_BomoFB_comp116092_c0_seq1
947bp
 PREDICTED:_zyxin_[Bombyx_mori]
FPKM:3.27 TPM:3.58
5600 A_BomoFB_comp1160_c0_seq1
212bp
 hypothetical_protein_RR48_05192_[Papilio_machaon]
FPKM:1.40 TPM:1.54
5601 A_BomoFB_comp116150_c0_seq1
473bp
FPKM:3.74 TPM:4.10
5602 A_BomoFB_comp116160_c0_seq1
331bp
 PREDICTED:_neuroblastoma-amplified_sequence-like_[Bombyx_mori]
FPKM:5.84 TPM:6.40
5603 A_BomoFB_comp116172_c0_seq1
247bp
 hypothetical_protein_M407DRAFT_193093_[Tulasnella_calospora_MUT_4182]
FPKM:3.18 TPM:3.48
5604 A_BomoFB_comp116188_c0_seq1
614bp
 PREDICTED:_protein_IWS1_homolog_isoform_X2_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0006810 P transport
GO:0008380 P RNA splicing
GO:0010793 P regulation of mRNA export from nucleus
GO:0050684 P regulation of mRNA processing
GO:0051028 P mRNA transport
GO:0090239 P regulation of histone H4 acetylation
GO:2001253 P regulation of histone H3-K36 trimethylation
FPKM:3.28 TPM:3.59
5605 A_BomoFB_comp116189_c0_seq1
1517bp
 PREDICTED:_uncharacterized_protein_LOC106137902_[Amyelois_transitella]
FPKM:2.36 TPM:2.59
5606 A_BomoFB_comp116238_c0_seq1
406bp
 PREDICTED:_WD_repeat-containing_protein_89_[Amyelois_transitella]
FPKM:3.89 TPM:4.27
5607 A_BomoFB_comp116249_c0_seq1
1503bp
 putative_kelch_repeat_protein_[Danaus_plexippus]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:2.26 TPM:2.48
5608 A_BomoFB_comp116288_c0_seq1
1502bp
 hypothetical_protein_KGM_11728_[Danaus_plexippus]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0015075 F ion transmembrane transporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031966 C mitochondrial membrane
GO:0034220 P ion transmembrane transport
GO:0055072 P iron ion homeostasis
GO:0055085 P transmembrane transport
FPKM:2.80 TPM:3.07
5609 A_BomoFB_comp1162_c0_seq1
203bp
FPKM:1.70 TPM:1.86
5610 A_BomoFB_comp116302_c0_seq1
631bp
 PREDICTED:_lysosomal_alpha-glucosidase-like_isoform_X2_[Bombyx_mori]
GO:0000023 P maltose metabolic process
GO:0003824 F catalytic activity
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004558 F alpha-1,4-glucosidase activity
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005975 P carbohydrate metabolic process
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0030246 F carbohydrate binding
GO:0032450 F maltose alpha-glucosidase activity
FPKM:3.39 TPM:3.72
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