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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
5551 A_BomoFB_comp115383_c0_seq1
257bp
FPKM:0.70 TPM:0.77
5552 A_BomoFB_comp115399_c0_seq1
1122bp
 mod(mdg4)_protein_[Helicoverpa_armigera]
GO:0000794 C condensed nuclear chromosome
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006342 P heterochromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0007426 P tracheal outgrowth, open tracheal system
GO:0007435 P salivary gland morphogenesis
GO:0016458 P obsolete gene silencing
GO:0016568 P chromatin organization
GO:0031208 F POZ domain binding
GO:0031519 C PcG protein complex
GO:0035167 P larval lymph gland hemopoiesis
GO:0042803 F protein homodimerization activity
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
FPKM:3.47 TPM:3.80
5553 A_BomoFB_comp11544_c0_seq1
1935bp
 PREDICTED:_plasminogen_activator_inhibitor_1_RNA-binding_protein-like_[Amyelois_transitella]
GO:0003723 F RNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0042981 P regulation of apoptotic process
GO:0044822 F RNA binding
GO:0048471 C perinuclear region of cytoplasm
GO:0070062 C extracellular exosome
FPKM:145.74 TPM:159.69
5554 A_BomoFB_comp115455_c0_seq1
1119bp
 PREDICTED:_F-box/SPRY_domain-containing_protein_1-like_[Amyelois_transitella]
GO:0007274 P neuromuscular synaptic transmission
GO:0007399 P nervous system development
GO:0016567 P protein ubiquitination
GO:0030054 C cell junction
GO:0031594 C neuromuscular junction
GO:0045202 C synapse
GO:0045886 P negative regulation of synaptic assembly at neuromuscular junction
FPKM:2.26 TPM:2.48
5555 A_BomoFB_comp115477_c0_seq1
463bp
FPKM:2.71 TPM:2.97
5556 A_BomoFB_comp115479_c0_seq1
257bp
 PREDICTED:_uncharacterized_protein_LOC105842329_[Bombyx_mori]
FPKM:7.01 TPM:7.68
5557 A_BomoFB_comp115487_c0_seq1
391bp
 PREDICTED:_HIV_Tat-specific_factor_1_[Papilio_machaon]
FPKM:3.39 TPM:3.71
5558 A_BomoFB_comp115511_c0_seq1
907bp
 PREDICTED:_uncharacterized_protein_LOC106124770_[Papilio_xuthus]
GO:0005737 C cytoplasm
GO:0006629 P lipid metabolic process
GO:0006897 P endocytosis
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
FPKM:2.10 TPM:2.30
5559 A_BomoFB_comp115522_c0_seq1
973bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_peroxisomal_membrane_protein_PEX16_[Bombyx_mori]
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0007031 P peroxisome organization
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:3.09 TPM:3.39
5560 A_BomoFB_comp115523_c0_seq1
342bp
FPKM:4.76 TPM:5.22
5561 A_BomoFB_comp115524_c0_seq1
1285bp
 PREDICTED:_zinc_finger_protein_62-like_isoform_X3_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
FPKM:2.46 TPM:2.70
5562 A_BomoFB_comp115536_c0_seq1
711bp
 PREDICTED:_protein_ELYS_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0034399 C nuclear periphery
GO:0051292 P nuclear pore complex assembly
FPKM:2.88 TPM:3.15
5563 A_BomoFB_comp115550_c0_seq1
450bp
 PREDICTED:_follistatin-A_[Bombyx_mori]
FPKM:3.86 TPM:4.23
5564 A_BomoFB_comp115555_c0_seq1
660bp
FPKM:3.41 TPM:3.74
5565 A_BomoFB_comp115568_c0_seq1
358bp
 survivin-1_[Bombyx_mori]
GO:0000922 C spindle pole
GO:0001890 P placenta development
GO:0004842 F ubiquitin-protein transferase activity
GO:0004869 F cysteine-type endopeptidase inhibitor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006915 P apoptotic process
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008284 P positive regulation of cell population proliferation
GO:0009966 P regulation of signal transduction
GO:0010466 P negative regulation of peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030414 F peptidase inhibitor activity
GO:0030496 C midbody
GO:0032465 P regulation of cytokinesis
GO:0042127 P regulation of cell population proliferation
GO:0043066 P negative regulation of apoptotic process
GO:0051301 P cell division
GO:0060711 P labyrinthine layer development
GO:0060712 P spongiotrophoblast layer development
GO:0061631 F ubiquitin conjugating enzyme activity
GO:2001237 P negative regulation of extrinsic apoptotic signaling pathway
FPKM:6.50 TPM:7.12
5566 A_BomoFB_comp1155939_c0_seq1
204bp
FPKM:1.66 TPM:1.82
5567 A_BomoFB_comp115614_c0_seq1
762bp
 PREDICTED:_polycomb_protein_l(1)G0020_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0004402 F histone acetyltransferase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006364 P rRNA processing
GO:0007275 P multicellular organism development
GO:0008033 P tRNA processing
GO:0008080 F N-acetyltransferase activity
GO:0009267 P cellular response to starvation
GO:0016573 P histone acetylation
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0022008 P neurogenesis
FPKM:3.09 TPM:3.39
5568 A_BomoFB_comp115615_c0_seq1
671bp
 PREDICTED:_mitochondrial_ribosome-associated_GTPase_2-like_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005759 C mitochondrial matrix
GO:0005761 C mitochondrial ribosome
GO:0006417 P regulation of translation
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0042254 P ribosome biogenesis
GO:0044065 P regulation of respiratory system process
GO:0046872 F metal ion binding
GO:0070129 P regulation of mitochondrial translation
FPKM:4.01 TPM:4.39
5569 A_BomoFB_comp115650_c0_seq1
641bp
FPKM:2.25 TPM:2.47
5570 A_BomoFB_comp115656_c0_seq1
414bp
 PREDICTED:_epsin-2,_partial_[Papilio_xuthus]
FPKM:3.29 TPM:3.60
5571 A_BomoFB_comp115660_c0_seq1
339bp
FPKM:4.51 TPM:4.94
5572 A_BomoFB_comp115667_c0_seq1
742bp
FPKM:2.23 TPM:2.45
5573 A_BomoFB_comp115686_c0_seq1
248bp
FPKM:3.92 TPM:4.29
5574 A_BomoFB_comp115688_c0_seq1
686bp
FPKM:2.16 TPM:2.37
5575 A_BomoFB_comp115694_c0_seq1
397bp
 PREDICTED:_zinc_finger_protein_681-like_[Papilio_polytes]
FPKM:3.80 TPM:4.17
5576 A_BomoFB_comp1156_c0_seq1
242bp
 Integral_membrane_sensor_signal_transduction_histidine_kinase,_glucose_catabolism_cluster_[Moritella_sp._JT01]
FPKM:2.55 TPM:2.79
5577 A_BomoFB_comp115703_c0_seq1
556bp
FPKM:2.33 TPM:2.55
5578 A_BomoFB_comp115741_c0_seq1
904bp
 PREDICTED:_mediator_of_RNA_polymerase_II_transcription_subunit_12_[Bombyx_mori]
GO:0001104 F transcription coregulator activity
GO:0001105 F transcription coactivator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0007275 P multicellular organism development
GO:0007406 P negative regulation of neuroblast proliferation
GO:0016592 C mediator complex
GO:0022416 P chaeta development
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0035072 P ecdysone-mediated induction of salivary gland cell autophagic cell death
GO:0036011 P imaginal disc-derived leg segmentation
GO:0045498 P sex comb development
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048749 P compound eye development
GO:0070847 C core mediator complex
FPKM:3.24 TPM:3.55
5579 A_BomoFB_comp11574_c0_seq1
1192bp
FPKM:5.11 TPM:5.60
5580 A_BomoFB_comp115769_c0_seq1
312bp
 PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_34-like_[Bombyx_mori]
FPKM:6.26 TPM:6.86
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