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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
5191 A_BomoFB_comp109692_c0_seq1
298bp
FPKM:2.80 TPM:3.07
5192 A_BomoFB_comp10969_c0_seq1
520bp
 cold-related_protein_precursor_[Bombyx_mori]
FPKM:341.58 TPM:374.28
5193 A_BomoFB_comp109708_c0_seq1
816bp
 PREDICTED:_dual_specificity_protein_phosphatase_23-like_[Amyelois_transitella]
GO:0004721 F phosphoprotein phosphatase activity
GO:0004722 F protein serine/threonine phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006470 P protein dephosphorylation
GO:0008138 F protein tyrosine/serine/threonine phosphatase activity
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0070062 C extracellular exosome
FPKM:4.12 TPM:4.51
5194 A_BomoFB_comp1097098_c0_seq1
225bp
 PREDICTED:_potassium_channel_subfamily_K_member_9-like_[Amyelois_transitella]
GO:0005267 F potassium channel activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006813 P potassium ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0071805 P potassium ion transmembrane transport
FPKM:2.21 TPM:2.42
5195 A_BomoFB_comp109754_c0_seq1
242bp
FPKM:0.85 TPM:0.93
5196 A_BomoFB_comp109758_c0_seq1
492bp
 Uncharacterized_protein_OBRU01_26877,_partial_[Operophtera_brumata]
FPKM:4.04 TPM:4.43
5197 A_BomoFB_comp109778_c0_seq1
459bp
FPKM:3.34 TPM:3.66
5198 A_BomoFB_comp109787_c0_seq1
1881bp
 Solute_carrier_family_46_member_3_[Papilio_xuthus]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
FPKM:2.33 TPM:2.56
5199 A_BomoFB_comp109803_c0_seq1
211bp
FPKM:2.86 TPM:3.13
5200 A_BomoFB_comp109808_c0_seq1
1001bp
 hypothetical_protein_KGM_01538_[Danaus_plexippus]
GO:0000027 P ribosomal large subunit assembly
GO:0000460 P maturation of 5.8S rRNA
GO:0000470 P maturation of LSU-rRNA
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0019843 F rRNA binding
GO:0030687 C preribosome, large subunit precursor
GO:0042134 F rRNA primary transcript binding
GO:0042254 P ribosome biogenesis
FPKM:3.32 TPM:3.64
5201 A_BomoFB_comp10980_c0_seq1
1117bp
 zinc-containing_alcohol_dehydrogenase_[Bombyx_mori]
GO:0005975 P carbohydrate metabolic process
GO:0008270 F zinc ion binding
GO:0009405 P obsolete pathogenesis
GO:0016491 F oxidoreductase activity
GO:0033709 F D-arabinitol dehydrogenase, D-ribulose forming (NADP+) activity
GO:0042995 C cell projection
GO:0046872 F metal ion binding
GO:0052677 F D-arabinitol dehydrogenase, D-xylulose forming (NADP+) activity
GO:0055114 P obsolete oxidation-reduction process
FPKM:400.91 TPM:439.28
5202 A_BomoFB_comp109818_c0_seq1
1459bp
 PREDICTED:_uncharacterized_protein_LOC106136970_isoform_X3_[Amyelois_transitella]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001106 F transcription corepressor activity
GO:0003682 F chromatin binding
GO:0003712 F transcription coregulator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0042393 F histone binding
GO:0043197 C dendritic spine
GO:0043198 C dendritic shaft
GO:0046872 F metal ion binding
GO:0047485 F protein N-terminus binding
GO:0051491 P positive regulation of filopodium assembly
GO:0060999 P positive regulation of dendritic spine development
GO:0070491 F DNA-binding transcription factor binding
GO:0098815 P modulation of excitatory postsynaptic potential
GO:1902897 P regulation of postsynaptic density protein 95 clustering
GO:1902952 P positive regulation of dendritic spine maintenance
FPKM:3.11 TPM:3.40
5203 A_BomoFB_comp10981_c0_seq1
690bp
FPKM:17.35 TPM:19.01
5204 A_BomoFB_comp10982_c0_seq1
661bp
 transport_protein_Sec61_beta_subunit_[Bombyx_mori]
GO:0000060 P obsolete protein import into nucleus, translocation
GO:0005783 C endoplasmic reticulum
GO:0005784 C Sec61 translocon complex
GO:0005789 C endoplasmic reticulum membrane
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0030970 P retrograde protein transport, ER to cytosol
GO:0031205 C endoplasmic reticulum Sec complex
GO:0044822 F RNA binding
GO:0048408 F epidermal growth factor binding
FPKM:257.37 TPM:282.00
5205 A_BomoFB_comp10983_c0_seq1
1458bp
 isocitrate_dehydrogenase_[Bombyx_mori]
GO:0000287 F magnesium ion binding
GO:0004450 F isocitrate dehydrogenase (NADP+) activity
GO:0005737 C cytoplasm
GO:0006097 P glyoxylate cycle
GO:0006099 P tricarboxylic acid cycle
GO:0006102 P isocitrate metabolic process
GO:0006103 P 2-oxoglutarate metabolic process
GO:0016491 F oxidoreductase activity
GO:0016616 F oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0046872 F metal ion binding
GO:0051287 F NAD binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:350.15 TPM:383.67
5206 A_BomoFB_comp109854_c0_seq1
1441bp
 PREDICTED:_unconventional_prefoldin_RPB5_interactor_[Amyelois_transitella]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001106 F transcription corepressor activity
GO:0001558 P regulation of cell growth
GO:0003682 F chromatin binding
GO:0004864 F protein phosphatase inhibitor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005665 C RNA polymerase II, core complex
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0009615 P response to virus
GO:0010923 P negative regulation of phosphatase activity
GO:0019212 F phosphatase inhibitor activity
GO:0030425 C dendrite
GO:0042995 C cell projection
GO:0043231 C intracellular membrane-bounded organelle
GO:0051219 F phosphoprotein binding
GO:0071363 P cellular response to growth factor stimulus
GO:0071383 P cellular response to steroid hormone stimulus
GO:2001243 P negative regulation of intrinsic apoptotic signaling pathway
FPKM:2.24 TPM:2.46
5207 A_BomoFB_comp109856_c0_seq1
1423bp
 PREDICTED:_uncharacterized_protein_LOC106116160_[Papilio_xuthus]
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005770 C late endosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0007283 P spermatogenesis
GO:0015031 P protein transport
GO:0016023 C cytoplasmic vesicle
GO:0030154 P cell differentiation
GO:0031410 C cytoplasmic vesicle
GO:0055037 C recycling endosome
GO:0061008 P hepaticobiliary system development
FPKM:3.11 TPM:3.41
5208 A_BomoFB_comp109866_c0_seq1
744bp
 PREDICTED:_E3_SUMO-protein_ligase_RanBP2-like_[Plutella_xylostella]
GO:0000042 P protein localization to Golgi apparatus
GO:0005737 C cytoplasm
GO:0046907 P intracellular transport
FPKM:3.00 TPM:3.29
5209 A_BomoFB_comp1098838_c0_seq1
223bp
 hypothetical_protein_[Vibrio_proteolyticus]
FPKM:2.28 TPM:2.50
5210 A_BomoFB_comp109887_c0_seq1
893bp
 PREDICTED:_cytosolic_carboxypeptidase-like_protein_5_isoform_X1_[Bombyx_mori]
FPKM:2.75 TPM:3.02
5211 A_BomoFB_comp10988_c0_seq1
1472bp
 putative_voltage-dependent_anion-selective_channel_isoform_1_[Danaus_plexippus]
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005811 C lipid droplet
GO:0005875 C microtubule associated complex
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006820 P anion transport
GO:0006839 P mitochondrial transport
GO:0007005 P mitochondrion organization
GO:0007291 P sperm individualization
GO:0007602 P phototransduction
GO:0008308 F voltage-gated anion channel activity
GO:0015288 F porin activity
GO:0016006 C Nebenkern
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030382 P sperm mitochondrion organization
GO:0044070 P regulation of anion transport
GO:0046930 C pore complex
GO:0055085 P transmembrane transport
GO:1902017 P regulation of cilium assembly
GO:1903959 P regulation of anion transmembrane transport
FPKM:302.50 TPM:331.46
5212 A_BomoFB_comp1098_c0_seq1
382bp
 hypothetical_protein_RF55_14266_[Lasius_niger]
FPKM:1.09 TPM:1.19
5213 A_BomoFB_comp1098_c0_seq2
348bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Bombus_terrestris]
FPKM:0.00 TPM:0.00
5214 A_BomoFB_comp10990_c0_seq1
847bp
 PREDICTED:_muscle-specific_protein_20_[Plutella_xylostella]
FPKM:333.05 TPM:364.93
5215 A_BomoFB_comp109918_c0_seq1
345bp
FPKM:3.65 TPM:4.00
5216 A_BomoFB_comp109926_c0_seq1
976bp
 PREDICTED:_vacuolar_protein_sorting-associated_protein_33B-like,_partial_[Bombyx_mori]
FPKM:2.53 TPM:2.78
5217 A_BomoFB_comp109938_c0_seq1
1869bp
 PREDICTED:_lysine-specific_histone_demethylase_1A_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000784 C chromosome, telomeric region
GO:0000790 C chromatin
GO:0001085 F RNA polymerase II-specific DNA-binding transcription factor binding
GO:0001701 P in utero embryonic development
GO:0002039 F p53 binding
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0004407 F histone deacetylase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005667 C transcription regulator complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006482 P protein demethylation
GO:0007275 P multicellular organism development
GO:0007596 P blood coagulation
GO:0008134 F transcription factor binding
GO:0008283 P cell population proliferation
GO:0010569 P regulation of double-strand break repair via homologous recombination
GO:0010725 P regulation of primitive erythrocyte differentiation
GO:0016491 F oxidoreductase activity
GO:0016568 P chromatin organization
GO:0016575 P histone deacetylation
GO:0019899 F enzyme binding
GO:0021983 P pituitary gland development
GO:0030374 F nuclear receptor coactivator activity
GO:0030851 P granulocyte differentiation
GO:0032091 P negative regulation of protein binding
GO:0032451 F demethylase activity
GO:0032452 F histone demethylase activity
GO:0032453 F histone H3-methyl-lysine-4 demethylase activity
GO:0032454 F histone H3-methyl-lysine-9 demethylase activity
GO:0033169 P histone H3-K9 demethylation
GO:0033184 P positive regulation of histone ubiquitination
GO:0034644 P cellular response to UV
GO:0034648 F obsolete histone demethylase activity (H3-dimethyl-K4 specific)
GO:0034720 P histone H3-K4 demethylation
GO:0042162 F telomeric DNA binding
GO:0043234 C protein-containing complex
GO:0043392 P negative regulation of DNA binding
GO:0043426 F MRF binding
GO:0043433 P negative regulation of DNA-binding transcription factor activity
GO:0043518 P negative regulation of DNA damage response, signal transduction by p53 class mediator
GO:0044212 F transcription cis-regulatory region binding
GO:0045648 P positive regulation of erythrocyte differentiation
GO:0045654 P positive regulation of megakaryocyte differentiation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046886 P positive regulation of hormone biosynthetic process
GO:0050660 F flavin adenine dinucleotide binding
GO:0050681 F androgen receptor binding
GO:0051091 P positive regulation of DNA-binding transcription factor activity
GO:0051572 P negative regulation of histone H3-K4 methylation
GO:0051573 P negative regulation of histone H3-K9 methylation
GO:0055001 P muscle cell development
GO:0055114 P obsolete oxidation-reduction process
GO:0061752 F telomeric repeat-containing RNA binding
GO:0071480 P cellular response to gamma radiation
GO:1902166 P negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator
GO:1903827 P regulation of protein localization
GO:1990391 C DNA repair complex
GO:2000179 P positive regulation of neural precursor cell proliferation
GO:2000648 P positive regulation of stem cell proliferation
FPKM:2.83 TPM:3.10
5218 A_BomoFB_comp109985_c0_seq1
961bp
 PREDICTED:_protein_singed_[Plutella_xylostella]
GO:0003779 F actin binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0007015 P actin filament organization
GO:0007163 P establishment or maintenance of cell polarity
GO:0007275 P multicellular organism development
GO:0008407 P chaeta morphogenesis
GO:0009913 P epidermal cell differentiation
GO:0015629 C actin cytoskeleton
GO:0016358 P dendrite development
GO:0030034 P microvillar actin bundle assembly
GO:0030036 P actin cytoskeleton organization
GO:0030154 P cell differentiation
GO:0030674 F protein-macromolecule adaptor activity
GO:0031941 C filamentous actin
GO:0034399 C nuclear periphery
GO:0035017 P cuticle pattern formation
GO:0035099 P hemocyte migration
GO:0035317 P imaginal disc-derived wing hair organization
GO:0042060 P wound healing
GO:0043005 C neuron projection
GO:0043025 C neuronal cell body
GO:0046847 P filopodium assembly
GO:0048477 P oogenesis
GO:0048800 P antennal morphogenesis
GO:0048812 P neuron projection morphogenesis
GO:0051015 F actin filament binding
GO:0051017 P actin filament bundle assembly
FPKM:3.70 TPM:4.05
5219 A_BomoFB_comp1099_c0_seq1
249bp
FPKM:3.09 TPM:3.39
5220 A_BomoFB_comp10_c0_seq1
695bp
 putative_G-protein_coupled_receptor_125_[Papilio_machaon]
GO:0004871 F obsolete signal transducer activity
GO:0004888 F transmembrane signaling receptor activity
GO:0004930 F G protein-coupled receptor activity
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0007166 P cell surface receptor signaling pathway
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007275 P multicellular organism development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:1.27 TPM:1.39
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