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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
4951 A_BomoFB_comp1072837_c0_seq1
209bp
FPKM:1.49 TPM:1.63
4952 A_BomoFB_comp10729_c0_seq1
888bp
 PREDICTED:_gamete_and_mating-type_specific_protein_A-like_[Papilio_xuthus]
FPKM:593.96 TPM:650.81
4953 A_BomoFB_comp1072_c0_seq1
614bp
FPKM:1.51 TPM:1.66
4954 A_BomoFB_comp107307_c0_seq1
464bp
 endonuclease_and_reverse_transcriptase-like_protein_[Bombyx_mori]
FPKM:3.48 TPM:3.81
4955 A_BomoFB_comp1073124_c0_seq1
224bp
FPKM:1.12 TPM:1.23
4956 A_BomoFB_comp10731_c0_seq1
1551bp
 GL12416_[Drosophila_persimilis]
GO:0000166 F nucleotide binding
GO:0000235 C astral microtubule
GO:0003924 F GTPase activity
GO:0005200 F structural constituent of cytoskeleton
GO:0005525 F GTP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0007017 P microtubule-based process
GO:0007052 P mitotic spindle organization
GO:0007094 P mitotic spindle assembly checkpoint signaling
GO:0008152 P metabolic process
GO:0019730 P antimicrobial humoral response
GO:0045298 C tubulin complex
GO:0048471 C perinuclear region of cytoplasm
FPKM:676.83 TPM:741.61
4957 A_BomoFB_comp10734_c0_seq1
896bp
 heat_shock_protein_1_[Bombyx_mori]
GO:0006497 P protein lipidation
GO:0007275 P multicellular organism development
GO:0010506 P regulation of autophagy
GO:0010998 P regulation of translational initiation by eIF2 alpha phosphorylation
FPKM:614.87 TPM:673.72
4958 A_BomoFB_comp10735_c0_seq1
1682bp
 poly(U)-specific_endoribonuclease_homolog_precursor_[Papilio_xuthus]
GO:0003723 F RNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004521 F endoribonuclease activity
GO:0005575 C cellular_component
GO:0005576 C extracellular region
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
GO:0046872 F metal ion binding
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
FPKM:529.52 TPM:580.21
4959 A_BomoFB_comp10737_c0_seq1
1034bp
 cyclophilin-like_protein_[Bombyx_mori]
GO:0000413 P protein peptidyl-prolyl isomerization
GO:0003755 F peptidyl-prolyl cis-trans isomerase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005875 C microtubule associated complex
GO:0006457 P protein folding
GO:0008024 C cyclin/CDK positive transcription elongation factor complex
GO:0016538 F cyclin-dependent protein serine/threonine kinase regulator activity
GO:0016853 F isomerase activity
GO:0019908 C nuclear cyclin-dependent protein kinase holoenzyme complex
GO:0035071 P salivary gland cell autophagic cell death
GO:0042277 F peptide binding
GO:0045859 P regulation of protein kinase activity
GO:0048102 P autophagic cell death
FPKM:573.47 TPM:628.36
4960 A_BomoFB_comp10738_c0_seq1
1957bp
 ADP/ATP_translocase_[Bombyx_mori]
GO:0001508 P action potential
GO:0003735 F structural constituent of ribosome
GO:0005215 F transporter activity
GO:0005471 F ATP:ADP antiporter activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005811 C lipid droplet
GO:0005829 C cytosol
GO:0006412 P translation
GO:0006810 P transport
GO:0006839 P mitochondrial transport
GO:0007268 P chemical synaptic transmission
GO:0007629 P flight behavior
GO:0008340 P determination of adult lifespan
GO:0009612 P response to mechanical stimulus
GO:0010507 P negative regulation of autophagy
GO:0015866 P ADP transport
GO:0015867 P ATP transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0031966 C mitochondrial membrane
GO:0034599 P cellular response to oxidative stress
GO:0040011 P locomotion
GO:0046716 P muscle cell cellular homeostasis
GO:0048477 P oogenesis
GO:0048489 P synaptic vesicle transport
GO:0051124 P synaptic assembly at neuromuscular junction
GO:0051480 P regulation of cytosolic calcium ion concentration
GO:0051560 P mitochondrial calcium ion homeostasis
GO:0051900 P regulation of mitochondrial depolarization
GO:0055085 P transmembrane transport
GO:0070050 P neuron cellular homeostasis
GO:2001171 P positive regulation of ATP biosynthetic process
FPKM:464.66 TPM:509.13
4961 A_BomoFB_comp1073_c0_seq1
373bp
 PREDICTED:_2-aminoethanethiol_dioxygenase_[Amyelois_transitella]
GO:0000098 P sulfur amino acid catabolic process
GO:0005739 C mitochondrion
GO:0005829 C cytosol
GO:0016491 F oxidoreductase activity
GO:0016702 F oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
GO:0046872 F metal ion binding
GO:0047800 F cysteamine dioxygenase activity
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
FPKM:1.14 TPM:1.25
4962 A_BomoFB_comp107401_c0_seq1
2015bp
FPKM:2.49 TPM:2.73
4963 A_BomoFB_comp1074034_c0_seq1
278bp
 4-hydroxybenzoyl-CoA_thioesterase_[Clostridium_pasteurianum]
FPKM:1.12 TPM:1.22
4964 A_BomoFB_comp10741_c0_seq1
2345bp
 S-adenosyl-L-homocysteine_hydrolase_[Bombyx_mori]
GO:0004013 F adenosylhomocysteinase activity
GO:0005829 C cytosol
GO:0006730 P one-carbon metabolic process
GO:0016787 F hydrolase activity
GO:0033353 P S-adenosylmethionine cycle
FPKM:397.70 TPM:435.77
4965 A_BomoFB_comp10742_c0_seq1
895bp
 PREDICTED:_lysozyme-like_[Amyelois_transitella]
GO:0003796 F lysozyme activity
GO:0003824 F catalytic activity
GO:0005576 C extracellular region
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0019835 P cytolysis
GO:0042742 P defense response to bacterium
FPKM:541.72 TPM:593.57
4966 A_BomoFB_comp1074510_c0_seq1
210bp
 chromate_transporter_[Agrobacterium_tumefaciens]
FPKM:1.46 TPM:1.60
4967 A_BomoFB_comp1074546_c0_seq1
237bp
 PREDICTED:_uncharacterized_protein_LOC106694117_[Microplitis_demolitor]
FPKM:0.00 TPM:0.00
4968 A_BomoFB_comp107467_c0_seq1
476bp
 hypothetical_protein_KGM_21772_[Danaus_plexippus]
FPKM:3.71 TPM:4.06
4969 A_BomoFB_comp10747_c0_seq1
1877bp
 nimrod_B_precursor_[Bombyx_mori]
GO:0005576 C extracellular region
FPKM:739.07 TPM:809.81
4970 A_BomoFB_comp107485_c0_seq1
1782bp
 PREDICTED:_fatty-acid_amide_hydrolase_2-like_[Bombyx_mori]
GO:0005811 C lipid droplet
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016884 F carbon-nitrogen ligase activity, with glutamine as amido-N-donor
GO:0017064 F fatty acid amide hydrolase activity
GO:0019369 P arachidonic acid metabolic process
FPKM:3.16 TPM:3.46
4971 A_BomoFB_comp10748_c0_seq1
354bp
 ribosomal_protein_L29_[Bombyx_mori]
GO:0002181 P cytoplasmic translation
GO:0003682 F chromatin binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0022625 C cytosolic large ribosomal subunit
GO:0030529 C ribonucleoprotein complex
FPKM:780.42 TPM:855.12
4972 A_BomoFB_comp107514_c0_seq1
216bp
FPKM:2.59 TPM:2.84
4973 A_BomoFB_comp10753_c0_seq1
646bp
 60S_ribosomal_protein_L17_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0015934 C large ribosomal subunit
GO:0030529 C ribonucleoprotein complex
FPKM:837.66 TPM:917.84
4974 A_BomoFB_comp1075417_c0_seq1
227bp
FPKM:1.07 TPM:1.17
4975 A_BomoFB_comp107545_c0_seq1
264bp
FPKM:1.29 TPM:1.42
4976 A_BomoFB_comp1075460_c0_seq1
237bp
 PREDICTED:_uncharacterized_protein_LOC101743154_[Bombyx_mori]
FPKM:1.83 TPM:2.00
4977 A_BomoFB_comp107559_c0_seq1
1537bp
FPKM:3.01 TPM:3.30
4978 A_BomoFB_comp10755_c0_seq1
1976bp
 sorbitol_dehydrogenase_[Bombyx_mori]
GO:0003939 F L-iditol 2-dehydrogenase activity
GO:0005615 C extracellular space
GO:0005739 C mitochondrion
GO:0005829 C cytosol
GO:0005929 C cilium
GO:0006006 P glucose metabolic process
GO:0006060 P sorbitol metabolic process
GO:0006062 P sorbitol catabolic process
GO:0006970 P response to osmotic stress
GO:0008270 F zinc ion binding
GO:0009725 P response to hormone
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0019640 P glucuronate catabolic process to xylulose 5-phosphate
GO:0030246 F carbohydrate binding
GO:0030317 P flagellated sperm motility
GO:0031514 C motile cilium
GO:0031667 P response to nutrient levels
GO:0031966 C mitochondrial membrane
GO:0042493 P response to xenobiotic stimulus
GO:0042802 F identical protein binding
GO:0042995 C cell projection
GO:0046370 P fructose biosynthetic process
GO:0046526 F D-xylulose reductase activity
GO:0046686 P response to cadmium ion
GO:0046688 P response to copper ion
GO:0046872 F metal ion binding
GO:0051160 P L-xylitol catabolic process
GO:0051164 P L-xylitol metabolic process
GO:0051287 F NAD binding
GO:0055114 P obsolete oxidation-reduction process
GO:0070062 C extracellular exosome
FPKM:352.47 TPM:386.21
4979 A_BomoFB_comp107592_c0_seq1
229bp
FPKM:2.06 TPM:2.26
4980 A_BomoFB_comp107597_c0_seq1
709bp
 uracil_permease_[Amycolatopsis_orientalis]
FPKM:3.30 TPM:3.62
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