SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp10735_c0_seq1
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		poly(U)-specific_endoribonuclease_homolog_precursor_[Papilio_xuthus]
Ontology
GO:0003723 F RNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004521 F endoribonuclease activity
GO:0005575 C cellular_component
GO:0005576 C extracellular region
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
GO:0046872 F metal ion binding
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
Transcript
Level		FPKM:529.52 TPM:580.21
ORF EntryO_BomoFB16557_complete:A_BomoFB_comp10735_c0_seq1
Sequence
(Nucleotide)
AGATTTCGATTGGGTGTTTTATTATTTAAAAAATATGTATAAATTGTTCGATTTATTTAC
ATATTTAGAACATCGTTATGATAATCTCGAGGTTTCGAAATATATGTTGCATTAATAAAA
TTGACTATTTGTTAGATACACAAATGTATGTTGTAGAAAATATAATAATAAAACTATAGT
TCTTCCTTTAAGAGAAGACTTGTTTGTCTTTTTAAATATTATTTTTTTACCAAGTTGGGT
AAGCGGTGTCAATGACCGGTAAGTTTTCGACTTTGATCGATTTTGTTTGGATAGTGAAGG
GTATGTTGTTGAAGCGCAGTCTGCAAGGTCTGTCCGGGCGGGTCATGAAACAGAGCGTGT
ACAGAGCGGTCTCCAGTTCGGGGGAGGTGCCAACAAACATGTTCACTTCGGGCGCGTCTT
TCGTTTCGCTCAACACCGAGTGCTGCTTGAGGATCAGTCCTTTGCCACTAAGATCCAGCT
TGTCGATGTAACCCAAGTAGTTGGCTTTGTGATCTAATTCACGTTTAGCGAAGAACAACC
AGCTGTGAAGACCTAGAACCTCATTAGATTTGAGTTCAGCCATAAACACGTTCTCGAAGG
CGCAACTGCATTTGCAAAGGCCGGTCCAGTGGCGTGCGTACTTCGTGAACCAAATCTTTC
TCAGCAGCTCAACTTGTTCGGGATACTCATTCAGCTGAGTAATGCCTTTGTTGACTAAGA
AAGTAATGAGGCTCCTGATGGGTCCCGTAGCAAGAATAGTGTTGATGTAAGTGGTTTGTT
CCGTTTCTTCATTCGGCGTAACAAACTCTGGTCTGATCACATTCTTGTGATAGTTGTCGA
ATAGTGCAACAAAAGGTCTTATTGTTGGTCCGCTCCATACATTCTCAGGAACGTTTAATA
AATTCGATTGTGCTTCATCATTCCTAGACATAGGAGTGGTCTTGCCTTGTAAATTCACTT
GAATGTAGTTGAAGGCATTATTTATATCTGCATTAAACATTTCCTCGCTAACTCTGAGGA
GGTCATCGTCGGTCGTCGAATCTTGTGCTTGGCGCAACAAATCTTCGTAGCTCTTCTTCT
TCGCATAGTCAACGACGCCACCGACAACTGTGCCTATTTGCTGGAAAGTGTTTTGAGCTG
TGTTCCCTTGCTGACCAGTCACATGATTGCTAATCAAGTTGGGAAGGATGTTGTTGAAGA
TCTGGCCCGCAGCCTGGGCTATGTCATCAGCGTGACATACCCCCAGAAAAACAACGAAAA
TCAATGTAATTTTCATATTTGATTAATGCGTATGATCTAGCGCAGTCCCGGCGCACTAGT
GATTTTAGTATAGAGCCCGCGCGGAGTGGGCGATGTTCGACCTTTGGGTGACGTCAGCTC
CATGTGAATAAGTATATGTCCGTATAATATTGAGATTCAAACAACGTGCTTCTAGTTTTT
GCCTCGACATATGTCATGAATATCTTAGTACATTGGTAAATAAACAAATTCAACCTTCAT
TGTGACTCGCATGTCGCTTCCATAAAGGGGTACGCATCGTTTGTAATATCGGAAGTTTCT
TTGAGTAGTTCTCATCTGTGGGTTTCATTTAATTCATCATTGAAAGATATAATATTTATT
CACTCTTCTCTTCATATATGATCACTAAAAGAAAGTTATGAATGGAAACGAAGCAGATCT
GT
(1682 bp)

- SilkBase 1999-2023 -