SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search Assembled RNA-Seq

previous next from show/35635
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
4051 A_BomoFB_comp10547_c3_seq4
3600bp
 PREDICTED:_1-acyl-sn-glycerol-3-phosphate_acyltransferase_gamma-like_[Amyelois_transitella]
GO:0000139 C Golgi membrane
GO:0003841 F 1-acylglycerol-3-phosphate O-acyltransferase activity
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005886 C plasma membrane
GO:0006629 P lipid metabolic process
GO:0006654 P phosphatidic acid biosynthetic process
GO:0008152 P metabolic process
GO:0008654 P phospholipid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016024 P CDP-diacylglycerol biosynthetic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0019432 P triglyceride biosynthetic process
GO:0042171 F lysophosphatidic acid acyltransferase activity
FPKM:0.00 TPM:0.00
4052 A_BomoFB_comp10547_c3_seq5
657bp
 PREDICTED:_uncharacterized_protein_LOC101746397_isoform_X2_[Bombyx_mori]
FPKM:0.00 TPM:0.00
4053 A_BomoFB_comp10547_c3_seq6
231bp
 conserved_hypothetical_protein_[Culex_quinquefasciatus]
FPKM:0.00 TPM:0.00
4054 A_BomoFB_comp10547_c3_seq7
3644bp
 PREDICTED:_1-acyl-sn-glycerol-3-phosphate_acyltransferase_gamma-like_[Amyelois_transitella]
GO:0000139 C Golgi membrane
GO:0003841 F 1-acylglycerol-3-phosphate O-acyltransferase activity
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005886 C plasma membrane
GO:0006629 P lipid metabolic process
GO:0006654 P phosphatidic acid biosynthetic process
GO:0008152 P metabolic process
GO:0008654 P phospholipid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016024 P CDP-diacylglycerol biosynthetic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0019432 P triglyceride biosynthetic process
GO:0042171 F lysophosphatidic acid acyltransferase activity
FPKM:0.00 TPM:0.00
4055 A_BomoFB_comp10547_c3_seq8
3987bp
 PREDICTED:_1-acyl-sn-glycerol-3-phosphate_acyltransferase_gamma-like_[Amyelois_transitella]
GO:0000139 C Golgi membrane
GO:0003841 F 1-acylglycerol-3-phosphate O-acyltransferase activity
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005886 C plasma membrane
GO:0006629 P lipid metabolic process
GO:0006654 P phosphatidic acid biosynthetic process
GO:0008152 P metabolic process
GO:0008654 P phospholipid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016024 P CDP-diacylglycerol biosynthetic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0019432 P triglyceride biosynthetic process
GO:0042171 F lysophosphatidic acid acyltransferase activity
FPKM:8.09 TPM:8.87
4056 A_BomoFB_comp10547_c3_seq9
297bp
 conserved_hypothetical_protein_[Culex_quinquefasciatus]
FPKM:0.10 TPM:0.11
4057 A_BomoFB_comp10548_c0_seq1
774bp
FPKM:1.93 TPM:2.11
4058 A_BomoFB_comp10548_c1_seq1
286bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:25.90 TPM:28.37
4059 A_BomoFB_comp10548_c2_seq1
362bp
FPKM:13.32 TPM:14.59
4060 A_BomoFB_comp10548_c2_seq10
1809bp
 translation_initiation_factor_IF-2_[Ruminococcus_sp._AT10]
FPKM:4.57 TPM:5.01
4061 A_BomoFB_comp10548_c2_seq11
1623bp
 PREDICTED:_ubiquitin-like_modifier-activating_enzyme_5_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0008152 P metabolic process
GO:0008641 F ubiquitin-like modifier activating enzyme activity
GO:0046872 F metal ion binding
FPKM:8.21 TPM:9.00
4062 A_BomoFB_comp10548_c2_seq12
3896bp
 PREDICTED:_calcium-activated_potassium_channel_slowpoke_[Bombyx_mori]
GO:0005216 F ion channel activity
GO:0005244 F voltage-gated ion channel activity
GO:0005249 F voltage-gated potassium channel activity
GO:0005267 F potassium channel activity
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006813 P potassium ion transport
GO:0007623 P circadian rhythm
GO:0008076 C voltage-gated potassium channel complex
GO:0008582 P regulation of synaptic assembly at neuromuscular junction
GO:0015269 F calcium-activated potassium channel activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034765 P regulation of ion transmembrane transport
GO:0042493 P response to xenobiotic stimulus
GO:0043005 C neuron projection
GO:0043025 C neuronal cell body
GO:0045433 P male courtship behavior, veined wing generated song production
GO:0048512 P circadian behavior
GO:0055085 P transmembrane transport
GO:0060072 F large conductance calcium-activated potassium channel activity
GO:0071805 P potassium ion transmembrane transport
GO:1900074 P negative regulation of neuromuscular synaptic transmission
FPKM:0.00 TPM:0.00
4063 A_BomoFB_comp10548_c2_seq13
1073bp
 PREDICTED:_uncharacterized_protein_LOC106143208_[Amyelois_transitella]
FPKM:8.85 TPM:9.70
4064 A_BomoFB_comp10548_c2_seq14
225bp
FPKM:1.10 TPM:1.21
4065 A_BomoFB_comp10548_c2_seq15
938bp
 PREDICTED:_ubiquitin-like_modifier-activating_enzyme_5_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0008152 P metabolic process
GO:0008641 F ubiquitin-like modifier activating enzyme activity
GO:0046872 F metal ion binding
FPKM:11.10 TPM:12.16
4066 A_BomoFB_comp10548_c2_seq16
1098bp
 PREDICTED:_ubiquitin-like_modifier-activating_enzyme_5_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0008152 P metabolic process
GO:0008641 F ubiquitin-like modifier activating enzyme activity
GO:0046872 F metal ion binding
FPKM:1.46 TPM:1.59
4067 A_BomoFB_comp10548_c2_seq2
1900bp
 PREDICTED:_calcium-activated_potassium_channel_slowpoke_[Bombyx_mori]
GO:0005216 F ion channel activity
GO:0005244 F voltage-gated ion channel activity
GO:0005249 F voltage-gated potassium channel activity
GO:0005267 F potassium channel activity
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006813 P potassium ion transport
GO:0007623 P circadian rhythm
GO:0008076 C voltage-gated potassium channel complex
GO:0008582 P regulation of synaptic assembly at neuromuscular junction
GO:0015269 F calcium-activated potassium channel activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034765 P regulation of ion transmembrane transport
GO:0042493 P response to xenobiotic stimulus
GO:0043005 C neuron projection
GO:0043025 C neuronal cell body
GO:0045433 P male courtship behavior, veined wing generated song production
GO:0048512 P circadian behavior
GO:0055085 P transmembrane transport
GO:0060072 F large conductance calcium-activated potassium channel activity
GO:0071805 P potassium ion transmembrane transport
GO:1900074 P negative regulation of neuromuscular synaptic transmission
FPKM:0.00 TPM:0.00
4068 A_BomoFB_comp10548_c2_seq3
2352bp
 PREDICTED:_calcium-activated_potassium_channel_slowpoke_[Bombyx_mori]
GO:0005216 F ion channel activity
GO:0005244 F voltage-gated ion channel activity
GO:0005249 F voltage-gated potassium channel activity
GO:0005267 F potassium channel activity
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006813 P potassium ion transport
GO:0007623 P circadian rhythm
GO:0008076 C voltage-gated potassium channel complex
GO:0008582 P regulation of synaptic assembly at neuromuscular junction
GO:0015269 F calcium-activated potassium channel activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034765 P regulation of ion transmembrane transport
GO:0042493 P response to xenobiotic stimulus
GO:0043005 C neuron projection
GO:0043025 C neuronal cell body
GO:0045433 P male courtship behavior, veined wing generated song production
GO:0048512 P circadian behavior
GO:0055085 P transmembrane transport
GO:0060072 F large conductance calcium-activated potassium channel activity
GO:0071805 P potassium ion transmembrane transport
GO:1900074 P negative regulation of neuromuscular synaptic transmission
FPKM:0.00 TPM:0.00
4069 A_BomoFB_comp10548_c2_seq4
4348bp
 PREDICTED:_calcium-activated_potassium_channel_slowpoke_[Bombyx_mori]
GO:0005216 F ion channel activity
GO:0005244 F voltage-gated ion channel activity
GO:0005249 F voltage-gated potassium channel activity
GO:0005267 F potassium channel activity
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006813 P potassium ion transport
GO:0007623 P circadian rhythm
GO:0008076 C voltage-gated potassium channel complex
GO:0008582 P regulation of synaptic assembly at neuromuscular junction
GO:0015269 F calcium-activated potassium channel activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034765 P regulation of ion transmembrane transport
GO:0042493 P response to xenobiotic stimulus
GO:0043005 C neuron projection
GO:0043025 C neuronal cell body
GO:0045433 P male courtship behavior, veined wing generated song production
GO:0048512 P circadian behavior
GO:0055085 P transmembrane transport
GO:0060072 F large conductance calcium-activated potassium channel activity
GO:0071805 P potassium ion transmembrane transport
GO:1900074 P negative regulation of neuromuscular synaptic transmission
FPKM:18.19 TPM:19.93
4070 A_BomoFB_comp10548_c2_seq5
396bp
FPKM:26.74 TPM:29.30
4071 A_BomoFB_comp10548_c2_seq6
1124bp
 PREDICTED:_CKLF-like_MARVEL_transmembrane_domain-containing_protein_4_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005125 F cytokine activity
GO:0005575 C cellular_component
GO:0005615 C extracellular space
GO:0006935 P chemotaxis
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:13.80 TPM:15.12
4072 A_BomoFB_comp10548_c2_seq7
1342bp
 calcium-activated_potassium_channel_alpha_subunit_[Manduca_sexta]
GO:0005216 F ion channel activity
GO:0005244 F voltage-gated ion channel activity
GO:0005249 F voltage-gated potassium channel activity
GO:0005267 F potassium channel activity
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006813 P potassium ion transport
GO:0007623 P circadian rhythm
GO:0008076 C voltage-gated potassium channel complex
GO:0008582 P regulation of synaptic assembly at neuromuscular junction
GO:0015269 F calcium-activated potassium channel activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034765 P regulation of ion transmembrane transport
GO:0042493 P response to xenobiotic stimulus
GO:0043005 C neuron projection
GO:0043025 C neuronal cell body
GO:0045433 P male courtship behavior, veined wing generated song production
GO:0048512 P circadian behavior
GO:0055085 P transmembrane transport
GO:0060072 F large conductance calcium-activated potassium channel activity
GO:0071805 P potassium ion transmembrane transport
GO:1900074 P negative regulation of neuromuscular synaptic transmission
FPKM:0.94 TPM:1.03
4073 A_BomoFB_comp10548_c2_seq8
317bp
 TBC_domain_protein_[Dictyocaulus_viviparus]
FPKM:1.25 TPM:1.36
4074 A_BomoFB_comp10548_c2_seq9
621bp
FPKM:1.53 TPM:1.67
4075 A_BomoFB_comp10548_c3_seq1
265bp
FPKM:1.28 TPM:1.40
4076 A_BomoFB_comp10548_c5_seq1
4521bp
 Endoprotease_FURIN_[Spodoptera_frugiperda]
GO:0004252 F serine-type endopeptidase activity
GO:0005886 C plasma membrane
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0010906 P regulation of glucose metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
GO:0051048 P negative regulation of secretion
FPKM:7.81 TPM:8.56
4077 A_BomoFB_comp10548_c6_seq1
1545bp
 PREDICTED:_charged_multivesicular_body_protein_2a-like_[Plutella_xylostella]
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0006810 P transport
GO:0007034 P vacuolar transport
GO:0010458 P exit from mitosis
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0031468 P nuclear membrane reassembly
GO:0031902 C late endosome membrane
FPKM:7.49 TPM:8.21
4078 A_BomoFB_comp10548_c7_seq1
1517bp
 PREDICTED:_retinol_dehydrogenase_12-like_[Papilio_machaon]
GO:0001649 P osteoblast differentiation
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0005765 C lysosomal membrane
GO:0005783 C endoplasmic reticulum
GO:0008106 F alcohol dehydrogenase (NADP+) activity
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0042572 P retinol metabolic process
GO:0055114 P obsolete oxidation-reduction process
FPKM:18.37 TPM:20.13
4079 A_BomoFB_comp10549_c0_seq1
233bp
 hypothetical_protein_[Escherichia_coli]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:3.88 TPM:4.25
4080 A_BomoFB_comp10549_c0_seq2
3366bp
 PREDICTED:_uncharacterized_protein_LOC105842136_[Bombyx_mori]
FPKM:19.46 TPM:21.33
previous next from show/35635

- SilkBase 1999-2023 -