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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
4021 A_BomoFB_comp10546_c0_seq2
1697bp
 endonuclease_and_reverse_transcriptase-like_protein_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:6.64 TPM:7.27
4022 A_BomoFB_comp10546_c0_seq3
1646bp
 endonuclease_and_reverse_transcriptase-like_protein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005215 F transporter activity
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006691 P leukotriene metabolic process
GO:0006810 P transport
GO:0009235 P cobalamin metabolic process
GO:0015420 F ABC-type vitamin B12 transporter activity
GO:0015889 P cobalamin transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016323 C basolateral plasma membrane
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0035461 P vitamin transmembrane transport
GO:0042493 P response to xenobiotic stimulus
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0043225 F ATPase-coupled inorganic anion transmembrane transporter activity
GO:0055085 P transmembrane transport
GO:0070062 C extracellular exosome
GO:0098656 P anion transmembrane transport
FPKM:1.09 TPM:1.20
4023 A_BomoFB_comp10546_c0_seq4
2907bp
 endonuclease_and_reverse_transcriptase-like_protein_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0009055 F electron transfer activity
GO:0035073 P pupariation
GO:0045998 P positive regulation of ecdysteroid biosynthetic process
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051537 F 2 iron, 2 sulfur cluster binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:3.65 TPM:4.00
4024 A_BomoFB_comp10546_c0_seq5
217bp
 endonuclease_and_reverse_transcriptase-like_protein_[Bombyx_mori]
FPKM:2.54 TPM:2.79
4025 A_BomoFB_comp10546_c0_seq6
2888bp
 endonuclease_and_reverse_transcriptase-like_protein_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0009055 F electron transfer activity
GO:0035073 P pupariation
GO:0045998 P positive regulation of ecdysteroid biosynthetic process
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051537 F 2 iron, 2 sulfur cluster binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:3.67 TPM:4.02
4026 A_BomoFB_comp10546_c0_seq7
1627bp
 endonuclease_and_reverse_transcriptase-like_protein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005215 F transporter activity
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006691 P leukotriene metabolic process
GO:0006810 P transport
GO:0009235 P cobalamin metabolic process
GO:0015420 F ABC-type vitamin B12 transporter activity
GO:0015889 P cobalamin transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016323 C basolateral plasma membrane
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0035461 P vitamin transmembrane transport
GO:0042493 P response to xenobiotic stimulus
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0043225 F ATPase-coupled inorganic anion transmembrane transporter activity
GO:0055085 P transmembrane transport
GO:0070062 C extracellular exosome
GO:0098656 P anion transmembrane transport
FPKM:1.91 TPM:2.09
4027 A_BomoFB_comp10546_c0_seq8
1678bp
 endonuclease_and_reverse_transcriptase-like_protein_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:11.29 TPM:12.37
4028 A_BomoFB_comp10547_c0_seq1
223bp
FPKM:2.28 TPM:2.50
4029 A_BomoFB_comp10547_c2_seq1
474bp
 reverse_transcriptase_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:0.00 TPM:0.00
4030 A_BomoFB_comp10547_c2_seq10
597bp
 reverse_transcriptase_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:2.17 TPM:2.38
4031 A_BomoFB_comp10547_c2_seq11
885bp
FPKM:0.00 TPM:0.00
4032 A_BomoFB_comp10547_c2_seq12
564bp
 reverse_transcriptase_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:0.69 TPM:0.75
4033 A_BomoFB_comp10547_c2_seq13
416bp
 reverse_transcriptase_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:0.00 TPM:0.00
4034 A_BomoFB_comp10547_c2_seq2
294bp
FPKM:0.00 TPM:0.00
4035 A_BomoFB_comp10547_c2_seq3
702bp
 reverse_transcriptase_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:6.22 TPM:6.81
4036 A_BomoFB_comp10547_c2_seq4
792bp
 reverse_transcriptase_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:8.50 TPM:9.31
4037 A_BomoFB_comp10547_c2_seq5
884bp
FPKM:2.25 TPM:2.46
4038 A_BomoFB_comp10547_c2_seq6
625bp
 reverse_transcriptase_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:2.58 TPM:2.83
4039 A_BomoFB_comp10547_c2_seq7
213bp
 reverse_transcriptase_[Bombyx_mori]
FPKM:26.10 TPM:28.60
4040 A_BomoFB_comp10547_c2_seq8
315bp
 reverse_transcriptase_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:4.26 TPM:4.67
4041 A_BomoFB_comp10547_c2_seq9
644bp
 reverse_transcriptase_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:1.71 TPM:1.88
4042 A_BomoFB_comp10547_c3_seq1
3659bp
 PREDICTED:_1-acyl-sn-glycerol-3-phosphate_acyltransferase_gamma-like_[Amyelois_transitella]
GO:0000139 C Golgi membrane
GO:0003841 F 1-acylglycerol-3-phosphate O-acyltransferase activity
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005886 C plasma membrane
GO:0006629 P lipid metabolic process
GO:0006654 P phosphatidic acid biosynthetic process
GO:0008152 P metabolic process
GO:0008654 P phospholipid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016024 P CDP-diacylglycerol biosynthetic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0019432 P triglyceride biosynthetic process
GO:0042171 F lysophosphatidic acid acyltransferase activity
FPKM:1.45 TPM:1.59
4043 A_BomoFB_comp10547_c3_seq10
318bp
FPKM:0.00 TPM:0.00
4044 A_BomoFB_comp10547_c3_seq11
1059bp
 PREDICTED:_uncharacterized_protein_LOC101746397_isoform_X2_[Bombyx_mori]
FPKM:0.00 TPM:0.00
4045 A_BomoFB_comp10547_c3_seq12
672bp
 conserved_hypothetical_protein_[Culex_quinquefasciatus]
FPKM:0.00 TPM:0.00
4046 A_BomoFB_comp10547_c3_seq13
756bp
 PREDICTED:_uncharacterized_protein_LOC101746397_isoform_X2_[Bombyx_mori]
FPKM:1.77 TPM:1.94
4047 A_BomoFB_comp10547_c3_seq14
3684bp
 PREDICTED:_1-acyl-sn-glycerol-3-phosphate_acyltransferase_gamma-like_[Amyelois_transitella]
GO:0000139 C Golgi membrane
GO:0003841 F 1-acylglycerol-3-phosphate O-acyltransferase activity
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005886 C plasma membrane
GO:0006629 P lipid metabolic process
GO:0006654 P phosphatidic acid biosynthetic process
GO:0008152 P metabolic process
GO:0008654 P phospholipid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016024 P CDP-diacylglycerol biosynthetic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0019432 P triglyceride biosynthetic process
GO:0042171 F lysophosphatidic acid acyltransferase activity
FPKM:0.00 TPM:0.00
4048 A_BomoFB_comp10547_c3_seq15
219bp
FPKM:0.00 TPM:0.00
4049 A_BomoFB_comp10547_c3_seq2
3585bp
 PREDICTED:_1-acyl-sn-glycerol-3-phosphate_acyltransferase_gamma-like_[Amyelois_transitella]
GO:0000139 C Golgi membrane
GO:0003841 F 1-acylglycerol-3-phosphate O-acyltransferase activity
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005886 C plasma membrane
GO:0006629 P lipid metabolic process
GO:0006654 P phosphatidic acid biosynthetic process
GO:0008152 P metabolic process
GO:0008654 P phospholipid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016024 P CDP-diacylglycerol biosynthetic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0019432 P triglyceride biosynthetic process
GO:0042171 F lysophosphatidic acid acyltransferase activity
FPKM:0.00 TPM:0.00
4050 A_BomoFB_comp10547_c3_seq3
209bp
FPKM:1.49 TPM:1.63
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