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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp10090_c0_seq1
Scaffold_idBomo_Chr1
NCBI non-redundant
(nr)		Yokozuna_[Bombyx_mori]
Ontology
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:3.36 TPM:3.68
ORF EntryO_BomoFB11709_5prime_partial:A_BomoFB_comp10090_c0_seq1
Sequence
(Nucleotide)
AATATTTCGAACAATGGACACTATTATTTTTACATTATATTCCAACTTGTACTACTTTTC
TCACCTTGCGAAATTTCTAGGCACTTTGGGTACTCTGGGCCCATAACCTGTTGAGTTTTA
TGCAGCGTTATAGCGATCGATCAGAGAAATAAAAAGAATTGTTTTAATCAGCCATCACGG
AGTACTTTTTTTTTAGTTACCATAGAGCAGTGTAGATTATACAGATTCATGTTCCACAGA
CTAGTGTTACAAACTATTCTTTAACAAATATTCCAACACCCCCCTTCGATGACAAGTTTC
TTTAAACTCAAATCTTATTTAACTAAAATTATAAATGTATAAACTTGCCATCGGACAACA
TAAAACAATATTAATACTGCTGTCTCACTTACAGCTTATTTAACAATTATATACTTGAAA
TAATCATCCAGTACAACCAAGTTACACATACATTGCAAATTAAAGAACTTTAACAATGTA
TCTTATCTAATATTAATCTACACATTAATGTTTACGTTTCAAATATCTTTCATTACTTTA
GTAACAAACTTCTAAAAAATACAAACTTTTCTTTGCATAAAGATTTTGTACAAATATCAG
CAATATTTTTATCAGATGACACATATTCAATATCTAATACATTATTCCTCACCAAGTCCT
TAATATAGTGCATCCTTATATCAATATGCTTACTCCTTTTAGAGTTTTCATTTGACTTCG
CTAAACATATTGCTCCCTTATTATCCATAAATAAAGTCAATTTACATTCATATCCAAAAT
CACACAGTACACCTTTCAAATACACTAACTCTTGAGCACAACAAGCACTAGCAATGTACT
CTGATTCTGCTGTCGATAATGCAACACAACTTTGTTTTCTAGAGTACCAAAATACAGGAT
TATCACTACACATTATGATACCCCCACTGACACTTTTGCGATCAACAATATCACCTGCCC
AATCAGAGTCTGAATATGCACATAAATCCACATCTAGATTATTCCTTTTTTGAAAAACTA
ACATTTTGTCTTTTGTAGCTTTTAGGTATTGCAGAATTCTCTTTCCAGCTTTCCAAGTCT
GTTGAGTAGGACAGTCTAGGTATCTGCTAAGATATGATACAGCAAACTGCAGATCTGGTC
TGGACATAGTAGCCAAATACATTATGCTTCCTATGAGTTGTCGATATGGTACATCAATAA
TCTTCTCATTTTTGTTTATTTGAAAATTTACCTCCATAGGTGTTCCTATACCTTTACATT
CTGACATTCCAAATTTTTCTAGTATCTTCTCAATTATCTTTTCTTGTTTAATCGTTAATT
TACTTTCTTCCTGTTTAATTTCCATACCAAGATATTTCTCAATCTGTCCTAAATCTTTAG
CTTTAAATTCTTGCTTCAATTTATTAATAATTTTTTCTGTATCCTTTTCCATTCCAATTA
ATAAAATATCATCTACAAATATTATAAGCCATATATTTTTATCTGTGTATAGACAACAAT
CATGTAATGACTGTATCAATCCATTCTTTCTTGCAAATTCATCAAATCTCATGTTCCAGC
ATTTAGGGCTTTCTTTTAATCCATACAATGCTCTCTTTAACCTCAAAACTATTCCATCTT
TGTTTTCTTTGCCTTTGGGTATTTTTATATAAACTTCACTATCAAGAAATCCATTGAGAA
AGGCTGTAGGAATATCCAATTGCCTTAATTTGTATCCTTCTTGGATAGCTTTTACAAAAA
ATGCTCTTATCGTAGACATTCTTACTACAGGACTGTAGAATATTTCATTCTCATAATTTT
TTATTTGAAAACCTCGAGCGACTAATCTGGCTTTCTTAGTGCCATCGTCTTTCGTTCTAA
AAACCCACTTAGTGTCTATAGCTAATTTTCCTTTCGGTAGTTTAGTCTCTTCCCAGCTTT
GTAAGTTCTCAAGTGCTGCTAATTCCTTATGTATCGCTTCTTTCCATGAAACTTCTTTTA
TCGCTTCTTCATAGCTTTCTGGGTCATTACACACTAAGTAACAATATGCTGTGTACGTCC
CAAAATTCTTTAGATAATCAGGTTGCTTTATTATCCTTCCTGATCTAGTTCTTTTTGTGT
CTGTCTCTTCATTTTTCTGTATTACTTTTTCTTCCTCAATTTTATTTTTATCATTGCACA
TAAGTTCATTTTGTGTGTCCTCTTCTGGTAAATAAATATAGTTGTTATTTTTAATACTGT
TTTTATGTTCATAGTACTTTTCATCAAACTTGACATCTCTGCAGAATATTATTTCTGTTG
TTTTTGGATTCCATAATCTATAACCTTGTTTGCCATAGCCAACCATAATGGCTTCTTCAG
CTCTATTATCTAATTTCTTATTCTGTGGGACACACGTATACCATGCTTTAGAACCAAATA
CCTTTAACTTGTTCAAGTTAACATTTTCTAGTCCGTAGTATATTTCAGCTGGTATCTTAT
ACTTTATAGATCTTGATGGGCATCGATTCAATTGATATGCTGCACACATTATAGCCTCAG
ACCACAAATATTTAGGTAATCCAGTTTCACTTAATAAAGTTCTTGACTTATCTAGTAATG
TTCTGTTTAGCCTCTCTGCCACACCATTTTGTTGTGGTGTGTAAGGTTGACTATACTCTA
TTATAATTCCATTTTCCATACAAAATTGCTTCAAACAGCCAGCGGTGAACTCTCCACCAT
TATCACATCTTATGCGTTTAACTTTAGTTTCCTTTTGTCTTTCTAACTCCTTTATATGAT
TTATTAAATTTCTTGTGGCTTCAGATTTATTCTTTAATAGATAAACAGTCACAAAATGAG
AAAAATCATCAGTTATGGTCTGGTAATATTGTTTTTCATCATAAGAAATTGGTGATACAG
GACCTCCAATATCTGTATGCAATAATTCTCCTATTTTTCTACTTCTTGGCCTGTCAACTG
GATAGAATGGTAAACGAGTAGATTTTCCCTTCATGCAAGGACCACATGTTTCATCAGACA
CAGGTAAACCCATAATTTTTAATGATTTCCTATTTAAGTGTCCGAGACGTTGGTGCCAAA
TATTTTTGTCTTGCTGTACACTTGAGTTCGCTTCTTCTATTAGTATTATTTCGCCTTGTA
CTATATATAAACCATTTCTATCTGAACATTTTAAGACTTTTCTTCCATTTATTATTTGTG
CTCCAAATTTTGTAAAAACAACTTTATTTCCTTTCATATTTAAGTTTCTTACAGATATTA
TATTATGATAAATCCCTGGGACCATTAACG
(3270 bp)

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