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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3901 A_BomoFB_comp10541_c0_seq1
588bp
 serpin-24_[Bombyx_mori]
FPKM:14.48 TPM:15.86
3902 A_BomoFB_comp10541_c1_seq1
660bp
FPKM:5.80 TPM:6.36
3903 A_BomoFB_comp10541_c1_seq10
1017bp
 PREDICTED:_cholinephosphotransferase_1_isoform_X3_[Bombyx_mori]
GO:0004142 F diacylglycerol cholinephosphotransferase activity
GO:0004307 F ethanolaminephosphotransferase activity
GO:0005634 C nucleus
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0006646 P phosphatidylethanolamine biosynthetic process
GO:0006656 P phosphatidylcholine biosynthetic process
GO:0006657 P CDP-choline pathway
GO:0008654 P phospholipid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016780 F phosphotransferase activity, for other substituted phosphate groups
GO:0031965 C nuclear membrane
GO:0046872 F metal ion binding
FPKM:12.24 TPM:13.41
3904 A_BomoFB_comp10541_c1_seq11
277bp
FPKM:2.82 TPM:3.09
3905 A_BomoFB_comp10541_c1_seq12
1384bp
 PREDICTED:_pseudouridine-5'-phosphatase_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005829 C cytosol
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0009117 P nucleotide metabolic process
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0043097 P pyrimidine nucleoside salvage
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
GO:1990738 F pseudouridine 5'-phosphatase activity
FPKM:5.74 TPM:6.29
3906 A_BomoFB_comp10541_c1_seq13
606bp
FPKM:0.00 TPM:0.00
3907 A_BomoFB_comp10541_c1_seq14
1157bp
FPKM:4.90 TPM:5.37
3908 A_BomoFB_comp10541_c1_seq15
1221bp
FPKM:0.00 TPM:0.00
3909 A_BomoFB_comp10541_c1_seq16
419bp
 PREDICTED:_choline/ethanolaminephosphotransferase_1_isoform_X1_[Amyelois_transitella]
FPKM:0.94 TPM:1.03
3910 A_BomoFB_comp10541_c1_seq17
1831bp
 PREDICTED:_pseudouridine-5'-phosphatase_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005829 C cytosol
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0009117 P nucleotide metabolic process
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0043097 P pyrimidine nucleoside salvage
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
GO:1990738 F pseudouridine 5'-phosphatase activity
FPKM:0.80 TPM:0.88
3911 A_BomoFB_comp10541_c1_seq18
5576bp
 PREDICTED:_ADP-dependent_glucokinase_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005576 C extracellular region
GO:0005783 C endoplasmic reticulum
GO:0005975 P carbohydrate metabolic process
GO:0006096 P glycolytic process
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0043843 F ADP-specific glucokinase activity
GO:0046872 F metal ion binding
FPKM:0.00 TPM:0.00
3912 A_BomoFB_comp10541_c1_seq19
1136bp
 PREDICTED:_pseudouridine-5'-phosphatase_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005829 C cytosol
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0009117 P nucleotide metabolic process
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0043097 P pyrimidine nucleoside salvage
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
GO:1990738 F pseudouridine 5'-phosphatase activity
FPKM:0.66 TPM:0.72
3913 A_BomoFB_comp10541_c1_seq2
1087bp
 PREDICTED:_pseudouridine-5'-phosphatase_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005829 C cytosol
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0009117 P nucleotide metabolic process
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0043097 P pyrimidine nucleoside salvage
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
GO:1990738 F pseudouridine 5'-phosphatase activity
FPKM:2.16 TPM:2.36
3914 A_BomoFB_comp10541_c1_seq20
5691bp
 PREDICTED:_ADP-dependent_glucokinase_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005576 C extracellular region
GO:0005783 C endoplasmic reticulum
GO:0005975 P carbohydrate metabolic process
GO:0006096 P glycolytic process
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0043843 F ADP-specific glucokinase activity
GO:0046872 F metal ion binding
FPKM:4.49 TPM:4.92
3915 A_BomoFB_comp10541_c1_seq21
1782bp
 PREDICTED:_pseudouridine-5'-phosphatase_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005829 C cytosol
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0009117 P nucleotide metabolic process
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0043097 P pyrimidine nucleoside salvage
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
GO:1990738 F pseudouridine 5'-phosphatase activity
FPKM:1.41 TPM:1.55
3916 A_BomoFB_comp10541_c1_seq22
2398bp
 PREDICTED:_choline/ethanolaminephosphotransferase_1_isoform_X4_[Bombyx_mori]
GO:0004142 F diacylglycerol cholinephosphotransferase activity
GO:0004307 F ethanolaminephosphotransferase activity
GO:0005634 C nucleus
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0006646 P phosphatidylethanolamine biosynthetic process
GO:0006656 P phosphatidylcholine biosynthetic process
GO:0006657 P CDP-choline pathway
GO:0008654 P phospholipid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016780 F phosphotransferase activity, for other substituted phosphate groups
GO:0031965 C nuclear membrane
GO:0046872 F metal ion binding
FPKM:0.00 TPM:0.00
3917 A_BomoFB_comp10541_c1_seq23
479bp
FPKM:5.86 TPM:6.42
3918 A_BomoFB_comp10541_c1_seq24
3630bp
 PREDICTED:_ADP-dependent_glucokinase_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005576 C extracellular region
GO:0005783 C endoplasmic reticulum
GO:0005975 P carbohydrate metabolic process
GO:0006096 P glycolytic process
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0043843 F ADP-specific glucokinase activity
GO:0046872 F metal ion binding
FPKM:7.92 TPM:8.68
3919 A_BomoFB_comp10541_c1_seq25
1423bp
FPKM:1.93 TPM:2.11
3920 A_BomoFB_comp10541_c1_seq26
5575bp
 PREDICTED:_ADP-dependent_glucokinase_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005576 C extracellular region
GO:0005783 C endoplasmic reticulum
GO:0005975 P carbohydrate metabolic process
GO:0006096 P glycolytic process
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0043843 F ADP-specific glucokinase activity
GO:0046872 F metal ion binding
FPKM:1.68 TPM:1.84
3921 A_BomoFB_comp10541_c1_seq27
296bp
 E3_ubiquitin-protein_ligase_SspH2,_partial_[Salmonella_enterica_subsp._arizonae_serovar_18:z4,z23:-]
FPKM:0.00 TPM:0.00
3922 A_BomoFB_comp10541_c1_seq28
2397bp
 PREDICTED:_choline/ethanolaminephosphotransferase_1_isoform_X4_[Bombyx_mori]
GO:0004142 F diacylglycerol cholinephosphotransferase activity
GO:0004307 F ethanolaminephosphotransferase activity
GO:0005634 C nucleus
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0006646 P phosphatidylethanolamine biosynthetic process
GO:0006656 P phosphatidylcholine biosynthetic process
GO:0006657 P CDP-choline pathway
GO:0008654 P phospholipid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016780 F phosphotransferase activity, for other substituted phosphate groups
GO:0031965 C nuclear membrane
GO:0046872 F metal ion binding
FPKM:0.00 TPM:0.00
3923 A_BomoFB_comp10541_c1_seq29
5692bp
 PREDICTED:_ADP-dependent_glucokinase_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005576 C extracellular region
GO:0005783 C endoplasmic reticulum
GO:0005975 P carbohydrate metabolic process
GO:0006096 P glycolytic process
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0043843 F ADP-specific glucokinase activity
GO:0046872 F metal ion binding
FPKM:0.00 TPM:0.00
3924 A_BomoFB_comp10541_c1_seq3
400bp
FPKM:1.26 TPM:1.38
3925 A_BomoFB_comp10541_c1_seq30
1433bp
 PREDICTED:_pseudouridine-5'-phosphatase_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005829 C cytosol
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0009117 P nucleotide metabolic process
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0043097 P pyrimidine nucleoside salvage
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
GO:1990738 F pseudouridine 5'-phosphatase activity
FPKM:2.28 TPM:2.50
3926 A_BomoFB_comp10541_c1_seq31
266bp
 E3_ubiquitin-protein_ligase_SspH2,_partial_[Salmonella_enterica_subsp._arizonae_serovar_18:z4,z23:-]
FPKM:6.32 TPM:6.93
3927 A_BomoFB_comp10541_c1_seq32
719bp
FPKM:1.72 TPM:1.89
3928 A_BomoFB_comp10541_c1_seq33
734bp
FPKM:3.45 TPM:3.78
3929 A_BomoFB_comp10541_c1_seq4
336bp
FPKM:0.00 TPM:0.00
3930 A_BomoFB_comp10541_c1_seq5
226bp
FPKM:11.93 TPM:13.07
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