SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp10541_c1_seq17
Scaffold_idBomo_Scaf006
NCBI non-redundant
(nr)		PREDICTED:_pseudouridine-5'-phosphatase_isoform_X2_[Bombyx_mori]
Ontology
GO:0003674 F molecular_function
GO:0005829 C cytosol
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0009117 P nucleotide metabolic process
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0043097 P pyrimidine nucleoside salvage
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
GO:1990738 F pseudouridine 5'-phosphatase activity
Transcript
Level		FPKM:0.80 TPM:0.88
ORF EntryO_BomoFB15636_complete:A_BomoFB_comp10541_c1_seq17
Sequence
(Nucleotide)
GTCAAATGTTTAGTTTTCACACTGAAGTAGGAAAAATTTTCAGTTTTCAAATTTTCTTTT
AGATTTCAATGCTAGTGTGCTATGTTCAGTGCATAGTAGGTACTTACTTAAAACGTAGTA
AAATAATTATTGTTCTCTTTGATTAAGTCCATTCAGTTCCATTTACACAAGTGTATTGGT
ATTTTTCTTATTTCATCAAGATATTTGAAAATATGACGACTTTTAAGCCGGTAACGCACG
TTCTCTTTGATATGGATGGGTTAATTTTAAATACTGAGGATTTATACACGGTCGGGTTTC
AAAAAGTGGCCTCGCGCTACGGCAAAAAGTTCACGTTCGAATTAAAAAGTCGGATAATGG
GACAGCAGACGAGAGAGTTTGCCGGGAACATAATAAAATATCTCGATTTGCCTCTTACAA
TCGAAGATTTTGTATCAGAGACACGTCAAATCTTCGAAGAGCTTTTCCCTCAGAGCGAAA
TACTGCCTGGTGTAAAGAAACTCATTTATCATCTAAATCAACACAACATTCCAATGGGTT
TAGCAACGAGCAGTAGTAAGGAGTCGTACGAATTGAAAACGCTCAAGCATCAAGATTTGT
TTGACTTATTTTCACATAAAACTTTAGGCTCTTCAGATCCAGACGTGAAGAGAGGGAAGC
CACACCCCGATATATTTATTGTTGCCGCCAATAAGTTTCTCGATAAACCGGATTTAGAAA
AGTGTCTCGTTTTCGAAGATTCGATTAATGGCGTGAAGGCGGCGCGCGCTGCTGGCATGC
AGGTCGTGATGGTCCCGGACCCGAGACTAGATCGGAGTCACGCCACCGAAGCTACACTTA
TCCTCGACTCAATGGAGGAATTTAAACCAGAACTGTTCGGTTTACCGCCCTACGAATTCT
GAATTGTCCAAAATAAACGCAAATTAAGCGCTCTTCACTTCAGTATACCATGTATCTCTA
ACAATTATGTCACGAAATTTTATAGGACGAAATAATAAATGCAAATTTATACATAATATA
CTAGCGGCCTGCTCCGGCTCCGCTCGGGTCTTTAACAAAAATTTCAACGATATTTGACGT
TGTTTTATTTTTTTTAAATAATAGAACACTTATTGCAGCATAACTATAATAGTTAGACAT
ATGCTGTTGCTACACTTTTTGTAAATAATACCGTGTTCCACAAAGTCGTAGTACATTATT
TTATTCTATCATCAATAGTTTTCGCAGGGCACGCTATGTAAAGAATATTTTAAGTAATTT
TTTTACACCTTGGGTTACATTATTGGAGTTTTAGTAAGGATCCCTAATTTTTTTGTGCTC
GACATCATACATATCACGGAAGTTAATTGACTCATAAGGTTAGCTTGTTCCAATAAATAA
AACAATGAAAATAATATACGTATGTACATACTTCTGAATGCTTCATTATAATTAGTTACG
GTTAAAAAAAAAAATCGAGTCCTAATTATTGCAGCAAAATTAAAAAAATCTACTAAGAGT
TTTTTGTTTAAAAAAAATATATTGTTCATTCGATAAAACTTAAGTAAAACACAAACAAAA
ACTTTGAACCGAACGAAGATATCAGTATCTTTAGCGTTATTATTAATTATATGCATTCAC
GTACAATGCATCTCATTATCATCTCGACAATGTCAATGGCGTGAAACAGATAGTCGATCT
GAACATATTATGTAGGTATTAATTTAAAACATTCTTTCACCGAGAACTCGTGACTGCTTC
GCGCCAGAGAAAGCTGGACGGTGCTTCCGTCCCGTGTGGGGTAAGCCCACTGAGTTTCTC
GCCGGAACTTCTCAGTGGGTCGCGTTTCCGA
(1831 bp)

- SilkBase 1999-2023 -