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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3721 A_BomoFB_comp10533_c2_seq3
375bp
FPKM:0.00 TPM:0.00
3722 A_BomoFB_comp10533_c2_seq30
2139bp
 methylglutaconyl-CoA_hydratase_[Agrotis_segetum]
GO:0003824 F catalytic activity
GO:0005575 C cellular_component
GO:0005739 C mitochondrion
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0008152 P metabolic process
GO:0016829 F lyase activity
FPKM:5.08 TPM:5.57
3723 A_BomoFB_comp10533_c2_seq31
1911bp
 PREDICTED:_39S_ribosomal_protein_L3,_mitochondrial_[Amyelois_transitella]
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005739 C mitochondrion
GO:0005762 C mitochondrial large ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0044822 F RNA binding
FPKM:1.54 TPM:1.69
3724 A_BomoFB_comp10533_c2_seq32
1013bp
 hypothetical_protein_KGM_21242_[Danaus_plexippus]
GO:0000398 P mRNA splicing, via spliceosome
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0043086 P negative regulation of catalytic activity
GO:0044822 F RNA binding
GO:0050999 P regulation of nitric-oxide synthase activity
GO:0051001 P negative regulation of nitric-oxide synthase activity
GO:0071013 C catalytic step 2 spliceosome
FPKM:4.06 TPM:4.44
3725 A_BomoFB_comp10533_c2_seq33
3094bp
 methylglutaconyl-CoA_hydratase_[Agrotis_segetum]
GO:0003824 F catalytic activity
GO:0005575 C cellular_component
GO:0005739 C mitochondrion
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0008152 P metabolic process
GO:0016829 F lyase activity
FPKM:7.02 TPM:7.70
3726 A_BomoFB_comp10533_c2_seq34
3262bp
 PREDICTED:_39S_ribosomal_protein_L3,_mitochondrial_[Amyelois_transitella]
GO:0005515 F protein binding
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0016567 P protein ubiquitination
GO:0019005 C SCF ubiquitin ligase complex
GO:0031467 C Cul7-RING ubiquitin ligase complex
FPKM:0.00 TPM:0.00
3727 A_BomoFB_comp10533_c2_seq35
1822bp
 S-phase_kinase-associated_protein_[Bombyx_mori]
GO:0005515 F protein binding
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0016567 P protein ubiquitination
GO:0019005 C SCF ubiquitin ligase complex
GO:0031467 C Cul7-RING ubiquitin ligase complex
FPKM:4.50 TPM:4.93
3728 A_BomoFB_comp10533_c2_seq36
1083bp
 Nucleolar_and_coiled-body_phosphoprotein_1_[Papilio_machaon]
FPKM:0.00 TPM:0.00
3729 A_BomoFB_comp10533_c2_seq37
386bp
 MULTISPECIES:_secretion_protein_HlyD_[Leptospira]
FPKM:6.37 TPM:6.98
3730 A_BomoFB_comp10533_c2_seq38
2157bp
FPKM:2.41 TPM:2.64
3731 A_BomoFB_comp10533_c2_seq39
1305bp
 PREDICTED:_tigger_transposable_element-derived_protein_4-like_[Microplitis_demolitor]
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0008150 P biological_process
FPKM:2.32 TPM:2.54
3732 A_BomoFB_comp10533_c2_seq4
1941bp
 S-phase_kinase-associated_protein_[Bombyx_mori]
GO:0005515 F protein binding
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0016567 P protein ubiquitination
GO:0019005 C SCF ubiquitin ligase complex
GO:0031467 C Cul7-RING ubiquitin ligase complex
FPKM:4.93 TPM:5.40
3733 A_BomoFB_comp10533_c2_seq5
1170bp
 Nucleolar_and_coiled-body_phosphoprotein_1_[Papilio_machaon]
FPKM:0.08 TPM:0.09
3734 A_BomoFB_comp10533_c2_seq6
2523bp
 PREDICTED:_39S_ribosomal_protein_L3,_mitochondrial_[Amyelois_transitella]
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005739 C mitochondrion
GO:0005762 C mitochondrial large ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0044822 F RNA binding
FPKM:0.00 TPM:0.00
3735 A_BomoFB_comp10533_c2_seq7
2610bp
 PREDICTED:_39S_ribosomal_protein_L3,_mitochondrial_[Amyelois_transitella]
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005739 C mitochondrion
GO:0005762 C mitochondrial large ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0044822 F RNA binding
FPKM:0.00 TPM:0.00
3736 A_BomoFB_comp10533_c2_seq8
373bp
FPKM:9.87 TPM:10.82
3737 A_BomoFB_comp10533_c2_seq9
2878bp
 methylglutaconyl-CoA_hydratase_[Agrotis_segetum]
GO:0003824 F catalytic activity
GO:0005575 C cellular_component
GO:0005739 C mitochondrion
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0008152 P metabolic process
GO:0016829 F lyase activity
FPKM:10.85 TPM:11.89
3738 A_BomoFB_comp10534_c0_seq1
1170bp
 PREDICTED:_uncharacterized_protein_LOC106132592,_partial_[Amyelois_transitella]
FPKM:0.00 TPM:0.00
3739 A_BomoFB_comp10534_c0_seq10
2108bp
 PREDICTED:_uncharacterized_protein_LOC105391048_[Plutella_xylostella]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:0.00 TPM:0.00
3740 A_BomoFB_comp10534_c0_seq11
1788bp
 PREDICTED:_uncharacterized_protein_LOC105391048_[Plutella_xylostella]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0005622 C intracellular anatomical structure
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019012 C virion component
GO:0030430 C host cell cytoplasm
GO:0042025 C host cell nucleus
GO:0046718 P viral entry into host cell
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0075713 P establishment of integrated proviral latency
GO:0075732 P viral penetration into host nucleus
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
FPKM:0.00 TPM:0.00
3741 A_BomoFB_comp10534_c0_seq12
1375bp
 PREDICTED:_uncharacterized_protein_LOC106132592,_partial_[Amyelois_transitella]
FPKM:5.84 TPM:6.39
3742 A_BomoFB_comp10534_c0_seq13
5050bp
 PREDICTED:_transmembrane_9_superfamily_member_2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005768 C endosome
GO:0008150 P biological_process
GO:0010008 C endosome membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0070062 C extracellular exosome
FPKM:0.16 TPM:0.18
3743 A_BomoFB_comp10534_c0_seq14
222bp
FPKM:0.00 TPM:0.00
3744 A_BomoFB_comp10534_c0_seq15
1916bp
 PREDICTED:_uncharacterized_protein_LOC105391048_[Plutella_xylostella]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0005622 C intracellular anatomical structure
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019012 C virion component
GO:0030430 C host cell cytoplasm
GO:0042025 C host cell nucleus
GO:0046718 P viral entry into host cell
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0075713 P establishment of integrated proviral latency
GO:0075732 P viral penetration into host nucleus
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
FPKM:0.65 TPM:0.71
3745 A_BomoFB_comp10534_c0_seq16
5796bp
 PREDICTED:_transmembrane_9_superfamily_member_2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005768 C endosome
GO:0008150 P biological_process
GO:0010008 C endosome membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0070062 C extracellular exosome
FPKM:3.36 TPM:3.68
3746 A_BomoFB_comp10534_c0_seq17
1010bp
FPKM:0.00 TPM:0.00
3747 A_BomoFB_comp10534_c0_seq18
955bp
 RHS_repeat-associated_core_domain-containing_protein_[Flavobacterium_sp._KMS]
FPKM:3.11 TPM:3.41
3748 A_BomoFB_comp10534_c0_seq19
4890bp
 PREDICTED:_transmembrane_9_superfamily_member_2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005768 C endosome
GO:0008150 P biological_process
GO:0010008 C endosome membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0070062 C extracellular exosome
FPKM:0.43 TPM:0.47
3749 A_BomoFB_comp10534_c0_seq2
589bp
FPKM:0.00 TPM:0.00
3750 A_BomoFB_comp10534_c0_seq20
5342bp
 PREDICTED:_transmembrane_9_superfamily_member_2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005768 C endosome
GO:0008150 P biological_process
GO:0010008 C endosome membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0070062 C extracellular exosome
FPKM:0.00 TPM:0.00
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