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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3751 A_BomoFB_comp10534_c0_seq21
718bp
FPKM:7.05 TPM:7.72
3752 A_BomoFB_comp10534_c0_seq22
1170bp
FPKM:0.00 TPM:0.00
3753 A_BomoFB_comp10534_c0_seq23
429bp
FPKM:16.29 TPM:17.85
3754 A_BomoFB_comp10534_c0_seq24
1308bp
 PREDICTED:_uncharacterized_protein_LOC106114667,_partial_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0000943 C retrotransposon nucleocapsid
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0004540 F ribonuclease activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019076 P viral release from host cell
GO:0032197 P transposition, RNA-mediated
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
FPKM:8.71 TPM:9.55
3755 A_BomoFB_comp10534_c0_seq25
2236bp
 PREDICTED:_uncharacterized_protein_LOC105391048_[Plutella_xylostella]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:2.16 TPM:2.37
3756 A_BomoFB_comp10534_c0_seq26
1247bp
 PREDICTED:_uncharacterized_protein_LOC106132592,_partial_[Amyelois_transitella]
FPKM:0.00 TPM:0.00
3757 A_BomoFB_comp10534_c0_seq3
878bp
 RHS_repeat-associated_core_domain-containing_protein_[Flavobacterium_sp._KMS]
FPKM:1.76 TPM:1.93
3758 A_BomoFB_comp10534_c0_seq4
1944bp
 PREDICTED:_uncharacterized_protein_LOC105391048_[Plutella_xylostella]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:3.27 TPM:3.59
3759 A_BomoFB_comp10534_c0_seq5
222bp
FPKM:1.16 TPM:1.27
3760 A_BomoFB_comp10534_c0_seq6
776bp
 PREDICTED:_uncharacterized_protein_LOC105384231_[Plutella_xylostella]
FPKM:8.79 TPM:9.63
3761 A_BomoFB_comp10534_c0_seq7
1624bp
 PREDICTED:_uncharacterized_protein_LOC105391048_[Plutella_xylostella]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0005622 C intracellular anatomical structure
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019012 C virion component
GO:0030430 C host cell cytoplasm
GO:0042025 C host cell nucleus
GO:0046718 P viral entry into host cell
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0075713 P establishment of integrated proviral latency
GO:0075732 P viral penetration into host nucleus
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
FPKM:0.16 TPM:0.17
3762 A_BomoFB_comp10534_c0_seq8
795bp
FPKM:0.00 TPM:0.00
3763 A_BomoFB_comp10534_c0_seq9
6116bp
 PREDICTED:_transmembrane_9_superfamily_member_2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005768 C endosome
GO:0008150 P biological_process
GO:0010008 C endosome membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0070062 C extracellular exosome
FPKM:6.23 TPM:6.82
3764 A_BomoFB_comp10535_c0_seq1
219bp
 glycosyl_transferase_[Desulfovibrio_longus]
FPKM:1.23 TPM:1.34
3765 A_BomoFB_comp10535_c1_seq1
2407bp
 PREDICTED:_fatty_acyl-CoA_reductase_1-like_[Bombyx_mori]
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0006629 P lipid metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0016620 F oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0055114 P obsolete oxidation-reduction process
GO:0080019 F fatty-acyl-CoA reductase (alcohol-forming) activity
FPKM:0.00 TPM:0.00
3766 A_BomoFB_comp10535_c1_seq2
2584bp
 PREDICTED:_fatty_acyl-CoA_reductase_1-like_[Bombyx_mori]
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0006629 P lipid metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0016620 F oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0055114 P obsolete oxidation-reduction process
GO:0080019 F fatty-acyl-CoA reductase (alcohol-forming) activity
FPKM:0.36 TPM:0.39
3767 A_BomoFB_comp10535_c1_seq3
408bp
 PREDICTED:_putative_fatty_acyl-CoA_reductase_CG5065_[Bombyx_mori]
FPKM:4.85 TPM:5.31
3768 A_BomoFB_comp10535_c1_seq4
2077bp
 PREDICTED:_fatty_acyl-CoA_reductase_1-like_[Bombyx_mori]
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0006629 P lipid metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0016620 F oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0055114 P obsolete oxidation-reduction process
GO:0080019 F fatty-acyl-CoA reductase (alcohol-forming) activity
FPKM:19.12 TPM:20.95
3769 A_BomoFB_comp10535_c1_seq5
2012bp
 PREDICTED:_fatty_acyl-CoA_reductase_1-like_[Bombyx_mori]
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0006629 P lipid metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0016620 F oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0055114 P obsolete oxidation-reduction process
GO:0080019 F fatty-acyl-CoA reductase (alcohol-forming) activity
FPKM:14.37 TPM:15.74
3770 A_BomoFB_comp10535_c1_seq6
2254bp
 PREDICTED:_fatty_acyl-CoA_reductase_1-like_[Bombyx_mori]
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0006629 P lipid metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0016620 F oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0055114 P obsolete oxidation-reduction process
GO:0080019 F fatty-acyl-CoA reductase (alcohol-forming) activity
FPKM:36.73 TPM:40.24
3771 A_BomoFB_comp10535_c1_seq7
738bp
 PREDICTED:_aminoacylase-1-like_[Bombyx_mori]
GO:0004046 F aminoacylase activity
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0006520 P cellular amino acid metabolic process
GO:0008152 P metabolic process
GO:0008237 F metallopeptidase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
FPKM:7.91 TPM:8.67
3772 A_BomoFB_comp10535_c2_seq1
250bp
 reverse_transcriptase_[Bombyx_mori]
FPKM:4.58 TPM:5.02
3773 A_BomoFB_comp105367_c0_seq1
280bp
FPKM:1.10 TPM:1.20
3774 A_BomoFB_comp10536_c0_seq1
494bp
 olfactory_receptor_[Bombyx_mori]
FPKM:12.92 TPM:14.15
3775 A_BomoFB_comp10536_c0_seq10
2844bp
FPKM:0.00 TPM:0.00
3776 A_BomoFB_comp10536_c0_seq11
879bp
FPKM:1.18 TPM:1.30
3777 A_BomoFB_comp10536_c0_seq12
258bp
FPKM:0.00 TPM:0.00
3778 A_BomoFB_comp10536_c0_seq13
240bp
FPKM:0.87 TPM:0.96
3779 A_BomoFB_comp10536_c0_seq14
240bp
FPKM:1.91 TPM:2.09
3780 A_BomoFB_comp10536_c0_seq15
256bp
FPKM:2.84 TPM:3.11
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