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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2551 A_BomoFB_comp10456_c0_seq17
1266bp
 chorion_class_A_[Bombyx_mori]
FPKM:49.47 TPM:54.21
2552 A_BomoFB_comp10456_c0_seq18
404bp
 olfactory_receptor_[Bombyx_mori]
FPKM:6.66 TPM:7.30
2553 A_BomoFB_comp10456_c0_seq19
541bp
FPKM:1.21 TPM:1.32
2554 A_BomoFB_comp10456_c0_seq2
766bp
 NADPH_oxidoreductase_[Bombyx_mori]
FPKM:2.40 TPM:2.63
2555 A_BomoFB_comp10456_c0_seq20
377bp
FPKM:7.83 TPM:8.57
2556 A_BomoFB_comp10456_c0_seq3
1683bp
 PREDICTED:_acetyl-CoA_carboxylase_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0003989 F acetyl-CoA carboxylase activity
GO:0004075 F biotin carboxylase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006084 P acetyl-CoA metabolic process
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0008152 P metabolic process
GO:0009374 F biotin binding
GO:0014070 P response to organic cyclic compound
GO:0016874 F ligase activity
GO:0019900 F kinase binding
GO:0042493 P response to xenobiotic stimulus
GO:0046872 F metal ion binding
GO:0051289 P protein homotetramerization
GO:2001295 P malonyl-CoA biosynthetic process
FPKM:4.24 TPM:4.64
2557 A_BomoFB_comp10456_c0_seq4
419bp
 chorion_class_A_[Bombyx_mori]
FPKM:3.91 TPM:4.28
2558 A_BomoFB_comp10456_c0_seq5
1321bp
 PREDICTED:_acetyl-CoA_carboxylase_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0003989 F acetyl-CoA carboxylase activity
GO:0004075 F biotin carboxylase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006084 P acetyl-CoA metabolic process
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0008152 P metabolic process
GO:0009374 F biotin binding
GO:0014070 P response to organic cyclic compound
GO:0016874 F ligase activity
GO:0019900 F kinase binding
GO:0042493 P response to xenobiotic stimulus
GO:0046872 F metal ion binding
GO:0051289 P protein homotetramerization
GO:2001295 P malonyl-CoA biosynthetic process
FPKM:32.00 TPM:35.06
2559 A_BomoFB_comp10456_c0_seq6
331bp
FPKM:71.27 TPM:78.09
2560 A_BomoFB_comp10456_c0_seq7
945bp
 diapause_bioclock_protein_[Bombyx_mori]
GO:0004784 F superoxide dismutase activity
GO:0005737 C cytoplasm
GO:0006801 P superoxide metabolic process
GO:0016209 F antioxidant activity
GO:0016491 F oxidoreductase activity
GO:0019430 P removal of superoxide radicals
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
GO:0098869 P cellular oxidant detoxification
FPKM:166.49 TPM:182.43
2561 A_BomoFB_comp10456_c0_seq8
868bp
 NADPH_oxidoreductase_[Bombyx_mori]
FPKM:123.18 TPM:134.97
2562 A_BomoFB_comp10456_c0_seq9
307bp
 chorion_class_A_[Bombyx_mori]
FPKM:0.00 TPM:0.00
2563 A_BomoFB_comp104570_c0_seq1
398bp
FPKM:4.04 TPM:4.42
2564 A_BomoFB_comp1045756_c0_seq1
281bp
 reverse_transcriptase,_partial_[Coenonympha_glycerion]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:1.09 TPM:1.19
2565 A_BomoFB_comp10457_c0_seq1
1490bp
 PREDICTED:_THAP_domain-containing_protein_2-like_[Bombyx_mori]
FPKM:0.94 TPM:1.03
2566 A_BomoFB_comp10457_c0_seq2
1572bp
 PREDICTED:_THAP_domain-containing_protein_2-like_[Bombyx_mori]
FPKM:0.00 TPM:0.00
2567 A_BomoFB_comp10457_c0_seq3
2471bp
 PREDICTED:_THAP_domain-containing_protein_2-like_[Bombyx_mori]
FPKM:4.34 TPM:4.75
2568 A_BomoFB_comp10457_c0_seq4
587bp
 PREDICTED:_THAP_domain-containing_protein_2-like_[Bombyx_mori]
FPKM:6.18 TPM:6.77
2569 A_BomoFB_comp10457_c0_seq5
2553bp
 PREDICTED:_THAP_domain-containing_protein_2-like_[Bombyx_mori]
FPKM:1.13 TPM:1.24
2570 A_BomoFB_comp104581_c0_seq1
1723bp
 PREDICTED:_fez1_isoform_X1_[Bombyx_mori]
GO:0000910 P cytokinesis
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0016055 P Wnt signaling pathway
GO:0030178 P negative regulation of Wnt signaling pathway
GO:0030496 C midbody
GO:0051013 P microtubule severing
GO:0051168 P nuclear export
GO:0051255 P spindle midzone assembly
GO:0051301 P cell division
FPKM:2.61 TPM:2.86
2571 A_BomoFB_comp104586_c0_seq1
987bp
 PREDICTED:_ATP_synthase_subunit_s-like_protein_[Papilio_polytes]
FPKM:3.85 TPM:4.22
2572 A_BomoFB_comp104589_c0_seq1
358bp
 Pseudouridylate_synthase_7-like_protein_[Operophtera_brumata]
GO:0000455 P enzyme-directed rRNA pseudouridine synthesis
GO:0001522 P pseudouridine synthesis
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006364 P rRNA processing
GO:0006397 P mRNA processing
GO:0006400 P tRNA modification
GO:0008033 P tRNA processing
GO:0008380 P RNA splicing
GO:0009451 P RNA modification
GO:0009982 F pseudouridine synthase activity
GO:0016853 F isomerase activity
GO:0031119 P tRNA pseudouridine synthesis
GO:0031120 P snRNA pseudouridine synthesis
GO:0042254 P ribosome biogenesis
GO:1990481 P mRNA pseudouridine synthesis
FPKM:4.95 TPM:5.43
2573 A_BomoFB_comp10458_c0_seq1
1666bp
 PREDICTED:_trichohyalin-like_[Bombyx_mori]
FPKM:4.78 TPM:5.24
2574 A_BomoFB_comp10458_c0_seq2
1615bp
FPKM:2.09 TPM:2.29
2575 A_BomoFB_comp10458_c0_seq3
6577bp
FPKM:12.71 TPM:13.93
2576 A_BomoFB_comp10458_c0_seq4
294bp
 hypothetical_protein_[Flavobacterium_sp._Root901]
FPKM:6.75 TPM:7.40
2577 A_BomoFB_comp10458_c0_seq5
1476bp
 PREDICTED:_trichohyalin-like_[Bombyx_mori]
FPKM:0.00 TPM:0.00
2578 A_BomoFB_comp10458_c0_seq6
625bp
FPKM:4.56 TPM:4.99
2579 A_BomoFB_comp10458_c0_seq7
2517bp
 PREDICTED:_trichohyalin-like_[Bombyx_mori]
FPKM:6.03 TPM:6.61
2580 A_BomoFB_comp10458_c0_seq8
2656bp
 PREDICTED:_trichohyalin-like_[Bombyx_mori]
FPKM:0.00 TPM:0.00
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