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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2521 A_BomoFB_comp10451_c0_seq7
4559bp
 PREDICTED:_piezo-type_mechanosensitive_ion_channel_component_isoform_X5_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0007638 P mechanosensory behavior
GO:0008381 F mechanosensitive ion channel activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034220 P ion transmembrane transport
GO:0050896 P response to stimulus
GO:0071260 P cellular response to mechanical stimulus
FPKM:0.33 TPM:0.36
2522 A_BomoFB_comp10451_c0_seq8
338bp
FPKM:1.74 TPM:1.91
2523 A_BomoFB_comp10451_c0_seq9
4635bp
 PREDICTED:_piezo-type_mechanosensitive_ion_channel_component_isoform_X5_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0007638 P mechanosensory behavior
GO:0008381 F mechanosensitive ion channel activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034220 P ion transmembrane transport
GO:0050896 P response to stimulus
GO:0071260 P cellular response to mechanical stimulus
FPKM:3.67 TPM:4.02
2524 A_BomoFB_comp10451_c2_seq1
495bp
FPKM:4.35 TPM:4.77
2525 A_BomoFB_comp10451_c3_seq1
1324bp
FPKM:13.61 TPM:14.91
2526 A_BomoFB_comp10452_c0_seq1
4227bp
 PREDICTED:_uncharacterized_protein_LOC105842017_[Bombyx_mori]
FPKM:2.57 TPM:2.82
2527 A_BomoFB_comp10452_c0_seq2
4097bp
 PREDICTED:_uncharacterized_protein_LOC105842017_[Bombyx_mori]
FPKM:5.75 TPM:6.30
2528 A_BomoFB_comp104539_c0_seq1
305bp
 PREDICTED:_serine/threonine-protein_kinase_unc-51_isoform_X4_[Bombyx_mori]
FPKM:8.37 TPM:9.17
2529 A_BomoFB_comp10453_c0_seq1
629bp
FPKM:13.76 TPM:15.07
2530 A_BomoFB_comp10453_c1_seq1
570bp
 PREDICTED:_uncharacterized_protein_LOC105663491_[Megachile_rotundata]
FPKM:1.56 TPM:1.71
2531 A_BomoFB_comp10453_c1_seq2
592bp
 olfactory_receptor_[Bombyx_mori]
FPKM:1.59 TPM:1.75
2532 A_BomoFB_comp10453_c1_seq3
593bp
 PREDICTED:_uncharacterized_protein_LOC105663491_[Megachile_rotundata]
FPKM:1.32 TPM:1.44
2533 A_BomoFB_comp10453_c1_seq4
396bp
FPKM:14.21 TPM:15.56
2534 A_BomoFB_comp10453_c1_seq5
263bp
FPKM:0.00 TPM:0.00
2535 A_BomoFB_comp104546_c0_seq1
1226bp
 Anoctamin-5_[Papilio_machaon]
FPKM:3.12 TPM:3.42
2536 A_BomoFB_comp10454_c0_seq1
3386bp
 nuclear_factor_NF-kappa-B_p110_subunit_isoform_1_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0002230 P positive regulation of defense response to virus by host
GO:0002376 P immune system process
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005719 C euchromatin
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006954 P inflammatory response
GO:0006955 P immune response
GO:0006963 P positive regulation of antibacterial peptide biosynthetic process
GO:0006964 P positive regulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria
GO:0006967 P positive regulation of antifungal peptide biosynthetic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0007165 P signal transduction
GO:0007249 P I-kappaB kinase/NF-kappaB signaling
GO:0008063 P Toll signaling pathway
GO:0009617 P response to bacterium
GO:0010628 P positive regulation of gene expression
GO:0019233 P sensory perception of pain
GO:0033256 C I-kappaB/NF-kappaB complex
GO:0034097 P response to cytokine
GO:0034198 P cellular response to amino acid starvation
GO:0038061 P NIK/NF-kappaB signaling
GO:0043565 F sequence-specific DNA binding
GO:0045087 P innate immune response
GO:0045088 P regulation of innate immune response
GO:0045089 P positive regulation of innate immune response
GO:0045429 P positive regulation of nitric oxide biosynthetic process
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048813 P dendrite morphogenesis
GO:0048935 P peripheral nervous system neuron development
GO:0050829 P defense response to Gram-negative bacterium
GO:0051607 P defense response to virus
GO:0061057 P peptidoglycan recognition protein signaling pathway
GO:2000647 P negative regulation of stem cell proliferation
FPKM:4.44 TPM:4.87
2537 A_BomoFB_comp10454_c0_seq2
3398bp
 nuclear_factor_NF-kappa-B_p110_subunit_isoform_1_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0002230 P positive regulation of defense response to virus by host
GO:0002376 P immune system process
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005719 C euchromatin
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006954 P inflammatory response
GO:0006955 P immune response
GO:0006963 P positive regulation of antibacterial peptide biosynthetic process
GO:0006964 P positive regulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria
GO:0006967 P positive regulation of antifungal peptide biosynthetic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0007165 P signal transduction
GO:0007249 P I-kappaB kinase/NF-kappaB signaling
GO:0008063 P Toll signaling pathway
GO:0009617 P response to bacterium
GO:0010628 P positive regulation of gene expression
GO:0019233 P sensory perception of pain
GO:0033256 C I-kappaB/NF-kappaB complex
GO:0034097 P response to cytokine
GO:0034198 P cellular response to amino acid starvation
GO:0038061 P NIK/NF-kappaB signaling
GO:0043565 F sequence-specific DNA binding
GO:0045087 P innate immune response
GO:0045088 P regulation of innate immune response
GO:0045089 P positive regulation of innate immune response
GO:0045429 P positive regulation of nitric oxide biosynthetic process
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048813 P dendrite morphogenesis
GO:0048935 P peripheral nervous system neuron development
GO:0050829 P defense response to Gram-negative bacterium
GO:0051607 P defense response to virus
GO:0061057 P peptidoglycan recognition protein signaling pathway
GO:2000647 P negative regulation of stem cell proliferation
FPKM:1.72 TPM:1.89
2538 A_BomoFB_comp104551_c0_seq1
1539bp
 PREDICTED:_DNA-binding_protein_Ewg_isoform_X4_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007417 P central nervous system development
GO:0007517 P muscle organ development
GO:0007560 P imaginal disc morphogenesis
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0045886 P negative regulation of synaptic assembly at neuromuscular junction
FPKM:3.32 TPM:3.64
2539 A_BomoFB_comp104552_c0_seq1
704bp
 hypothetical_protein_[Sinorhizobium_fredii]
FPKM:3.23 TPM:3.54
2540 A_BomoFB_comp10455_c0_seq1
2151bp
 ornithine_decarboxylase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004586 F ornithine decarboxylase activity
GO:0005737 C cytoplasm
GO:0006596 P polyamine biosynthetic process
GO:0016829 F lyase activity
GO:0016831 F carboxy-lyase activity
GO:0033387 P putrescine biosynthetic process from ornithine
FPKM:17.94 TPM:19.66
2541 A_BomoFB_comp104560_c0_seq1
944bp
 PREDICTED:_probable_phospholipid-transporting_ATPase_IA_isoform_X6_[Papilio_xuthus]
GO:0000139 C Golgi membrane
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0001750 C photoreceptor outer segment
GO:0003011 P involuntary skeletal muscle contraction
GO:0004012 F ATPase-coupled intramembrane lipid transporter activity
GO:0005524 F ATP binding
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0007409 P axonogenesis
GO:0007568 P aging
GO:0008152 P metabolic process
GO:0010842 P retina layer formation
GO:0010976 P positive regulation of neuron projection development
GO:0010996 P response to auditory stimulus
GO:0015914 P phospholipid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0031175 P neuron projection development
GO:0040018 P positive regulation of multicellular organism growth
GO:0042472 P inner ear morphogenesis
GO:0042755 P eating behavior
GO:0042995 C cell projection
GO:0043588 P skin development
GO:0045332 P phospholipid translocation
GO:0046872 F metal ion binding
GO:0048194 P Golgi vesicle budding
GO:0048666 P neuron development
GO:0050884 P neuromuscular process controlling posture
GO:0050908 P detection of light stimulus involved in visual perception
GO:0060052 P neurofilament cytoskeleton organization
GO:0061092 P positive regulation of phospholipid translocation
FPKM:4.49 TPM:4.92
2542 A_BomoFB_comp104562_c0_seq1
614bp
FPKM:2.90 TPM:3.17
2543 A_BomoFB_comp10456_c0_seq1
807bp
 NADPH_oxidoreductase_[Bombyx_mori]
FPKM:0.00 TPM:0.00
2544 A_BomoFB_comp10456_c0_seq10
705bp
 NADPH_oxidoreductase_[Bombyx_mori]
FPKM:2.09 TPM:2.29
2545 A_BomoFB_comp10456_c0_seq11
1785bp
 PREDICTED:_acetyl-CoA_carboxylase_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0003989 F acetyl-CoA carboxylase activity
GO:0004075 F biotin carboxylase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006084 P acetyl-CoA metabolic process
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0008152 P metabolic process
GO:0009374 F biotin binding
GO:0014070 P response to organic cyclic compound
GO:0016874 F ligase activity
GO:0019900 F kinase binding
GO:0042493 P response to xenobiotic stimulus
GO:0046872 F metal ion binding
GO:0051289 P protein homotetramerization
GO:2001295 P malonyl-CoA biosynthetic process
FPKM:6.54 TPM:7.16
2546 A_BomoFB_comp10456_c0_seq12
1020bp
 diapause_bioclock_protein_[Bombyx_mori]
GO:0004784 F superoxide dismutase activity
GO:0005737 C cytoplasm
GO:0006801 P superoxide metabolic process
GO:0016209 F antioxidant activity
GO:0016491 F oxidoreductase activity
GO:0019430 P removal of superoxide radicals
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
GO:0098869 P cellular oxidant detoxification
FPKM:0.73 TPM:0.79
2547 A_BomoFB_comp10456_c0_seq13
1377bp
 PREDICTED:_acetyl-CoA_carboxylase_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0003989 F acetyl-CoA carboxylase activity
GO:0004075 F biotin carboxylase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006084 P acetyl-CoA metabolic process
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0008152 P metabolic process
GO:0009374 F biotin binding
GO:0014070 P response to organic cyclic compound
GO:0016874 F ligase activity
GO:0019900 F kinase binding
GO:0042493 P response to xenobiotic stimulus
GO:0046872 F metal ion binding
GO:0051289 P protein homotetramerization
GO:2001295 P malonyl-CoA biosynthetic process
FPKM:13.18 TPM:14.44
2548 A_BomoFB_comp10456_c0_seq14
1660bp
 PREDICTED:_acetyl-CoA_carboxylase_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0003989 F acetyl-CoA carboxylase activity
GO:0004075 F biotin carboxylase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006084 P acetyl-CoA metabolic process
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0008152 P metabolic process
GO:0009374 F biotin binding
GO:0014070 P response to organic cyclic compound
GO:0016874 F ligase activity
GO:0019900 F kinase binding
GO:0042493 P response to xenobiotic stimulus
GO:0046872 F metal ion binding
GO:0051289 P protein homotetramerization
GO:2001295 P malonyl-CoA biosynthetic process
FPKM:0.00 TPM:0.00
2549 A_BomoFB_comp10456_c0_seq15
399bp
 chorion_class_A_[Bombyx_mori]
FPKM:0.21 TPM:0.23
2550 A_BomoFB_comp10456_c0_seq16
460bp
 chorion_class_A_[Bombyx_mori]
FPKM:67.12 TPM:73.54
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