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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2431 A_BomoFB_comp10446_c3_seq41
1496bp
 PREDICTED:_heparin_sulfate_O-sulfotransferase_[Amyelois_transitella]
GO:0000139 C Golgi membrane
GO:0004394 F heparan sulfate 2-O-sulfotransferase activity
GO:0005794 C Golgi apparatus
GO:0007165 P signal transduction
GO:0007424 P open tracheal system development
GO:0008146 F sulfotransferase activity
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
FPKM:0.00 TPM:0.00
2432 A_BomoFB_comp10446_c3_seq42
338bp
FPKM:0.00 TPM:0.00
2433 A_BomoFB_comp10446_c3_seq43
890bp
 PREDICTED:_heparin_sulfate_O-sulfotransferase_[Plutella_xylostella]
GO:0000139 C Golgi membrane
GO:0004394 F heparan sulfate 2-O-sulfotransferase activity
GO:0005794 C Golgi apparatus
GO:0007165 P signal transduction
GO:0007424 P open tracheal system development
GO:0008146 F sulfotransferase activity
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
FPKM:0.00 TPM:0.00
2434 A_BomoFB_comp10446_c3_seq44
1554bp
 peptidase_M16_[Campylobacter_jejuni]
FPKM:0.00 TPM:0.00
2435 A_BomoFB_comp10446_c3_seq45
304bp
FPKM:19.10 TPM:20.93
2436 A_BomoFB_comp10446_c3_seq46
242bp
FPKM:0.00 TPM:0.00
2437 A_BomoFB_comp10446_c3_seq47
1238bp
 PREDICTED:_nuclear_pore_glycoprotein_p62_isoform_X2_[Papilio_xuthus]
GO:0000922 C spindle pole
GO:0003682 F chromatin binding
GO:0005487 F structural constituent of nuclear pore
GO:0005515 F protein binding
GO:0005543 F phospholipid binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005642 C annulate lamellae
GO:0005643 C nuclear pore
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0006351 P transcription, DNA-templated
GO:0006405 P RNA export from nucleus
GO:0006406 P mRNA export from nucleus
GO:0006409 P tRNA export from nucleus
GO:0006606 P protein import into nucleus
GO:0006810 P transport
GO:0007067 P mitotic cell cycle
GO:0007077 P mitotic nuclear membrane disassembly
GO:0007166 P cell surface receptor signaling pathway
GO:0007283 P spermatogenesis
GO:0007569 P cell aging
GO:0008219 P cell death
GO:0008285 P negative regulation of cell population proliferation
GO:0009755 P hormone-mediated signaling pathway
GO:0009966 P regulation of signal transduction
GO:0010827 P regulation of glucose transmembrane transport
GO:0015031 P protein transport
GO:0016032 P viral process
GO:0016925 P protein sumoylation
GO:0017056 F structural constituent of nuclear pore
GO:0019083 P viral transcription
GO:0019894 F kinesin binding
GO:0030159 F signaling receptor complex adaptor activity
GO:0030529 C ribonucleoprotein complex
GO:0030544 F Hsp70 protein binding
GO:0031047 P gene silencing by RNA
GO:0031074 C nucleocytoplasmic transport complex
GO:0031965 C nuclear membrane
GO:0042059 P negative regulation of epidermal growth factor receptor signaling pathway
GO:0042169 F SH2 domain binding
GO:0042306 P regulation of protein import into nucleus
GO:0043066 P negative regulation of apoptotic process
GO:0043069 P negative regulation of programmed cell death
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043130 F ubiquitin binding
GO:0043231 C intracellular membrane-bounded organelle
GO:0043234 C protein-containing complex
GO:0043407 P negative regulation of MAP kinase activity
GO:0044613 C nuclear pore central transport channel
GO:0045742 P positive regulation of epidermal growth factor receptor signaling pathway
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046578 P regulation of Ras protein signal transduction
GO:0046580 P negative regulation of Ras protein signal transduction
GO:0046930 C pore complex
GO:0046966 F thyroid hormone receptor binding
GO:0051028 P mRNA transport
GO:0051169 P nuclear transport
GO:0051425 F PTB domain binding
GO:0051879 F Hsp90 protein binding
GO:0070208 P protein heterotrimerization
GO:0071426 P obsolete ribonucleoprotein complex export from nucleus
GO:0075733 P intracellular transport of virus
GO:0090543 C Flemming body
GO:1900034 P regulation of cellular response to heat
FPKM:7.41 TPM:8.12
2438 A_BomoFB_comp10446_c3_seq48
956bp
FPKM:1.29 TPM:1.41
2439 A_BomoFB_comp10446_c3_seq49
242bp
FPKM:0.00 TPM:0.00
2440 A_BomoFB_comp10446_c3_seq5
2123bp
 hypothetical_protein_NCU09687_[Neurospora_crassa_OR74A]
FPKM:0.00 TPM:0.00
2441 A_BomoFB_comp10446_c3_seq50
1650bp
 peptidase_M16_[Campylobacter_jejuni]
FPKM:0.00 TPM:0.00
2442 A_BomoFB_comp10446_c3_seq51
333bp
FPKM:0.00 TPM:0.00
2443 A_BomoFB_comp10446_c3_seq52
1772bp
 hypothetical_protein_NCU09687_[Neurospora_crassa_OR74A]
FPKM:0.00 TPM:0.00
2444 A_BomoFB_comp10446_c3_seq53
890bp
 PREDICTED:_heparin_sulfate_O-sulfotransferase_[Plutella_xylostella]
GO:0000139 C Golgi membrane
GO:0004394 F heparan sulfate 2-O-sulfotransferase activity
GO:0005794 C Golgi apparatus
GO:0007165 P signal transduction
GO:0007424 P open tracheal system development
GO:0008146 F sulfotransferase activity
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
FPKM:0.00 TPM:0.00
2445 A_BomoFB_comp10446_c3_seq54
1598bp
 peptidase_M16_[Campylobacter_jejuni]
FPKM:0.00 TPM:0.00
2446 A_BomoFB_comp10446_c3_seq55
1868bp
 hypothetical_protein_NCU09687_[Neurospora_crassa_OR74A]
FPKM:0.00 TPM:0.00
2447 A_BomoFB_comp10446_c3_seq56
593bp
FPKM:0.00 TPM:0.00
2448 A_BomoFB_comp10446_c3_seq57
2146bp
 PREDICTED:_prostamide/prostaglandin_F_synthase-like_[Amyelois_transitella]
GO:0001516 P prostaglandin biosynthetic process
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005829 C cytosol
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0006693 P prostaglandin metabolic process
GO:0008379 F thioredoxin peroxidase activity
GO:0016491 F oxidoreductase activity
GO:0016616 F oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0019371 P cyclooxygenase pathway
GO:0043209 C myelin sheath
GO:0047017 F prostaglandin-F synthase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0070062 C extracellular exosome
GO:0098869 P cellular oxidant detoxification
FPKM:15.57 TPM:17.06
2449 A_BomoFB_comp10446_c3_seq58
1575bp
 peptidase_M16_[Campylobacter_jejuni]
FPKM:7.88 TPM:8.64
2450 A_BomoFB_comp10446_c3_seq59
1905bp
 peptidase_M16_[Campylobacter_jejuni]
FPKM:0.00 TPM:0.00
2451 A_BomoFB_comp10446_c3_seq6
1008bp
FPKM:0.35 TPM:0.38
2452 A_BomoFB_comp10446_c3_seq7
263bp
FPKM:0.00 TPM:0.00
2453 A_BomoFB_comp10446_c3_seq8
934bp
 PREDICTED:_heparin_sulfate_O-sulfotransferase_[Plutella_xylostella]
GO:0000139 C Golgi membrane
GO:0004394 F heparan sulfate 2-O-sulfotransferase activity
GO:0005794 C Golgi apparatus
GO:0007165 P signal transduction
GO:0007424 P open tracheal system development
GO:0008146 F sulfotransferase activity
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
FPKM:0.00 TPM:0.00
2454 A_BomoFB_comp10446_c3_seq9
781bp
FPKM:2.27 TPM:2.49
2455 A_BomoFB_comp10446_c4_seq1
468bp
FPKM:3.05 TPM:3.34
2456 A_BomoFB_comp10447_c0_seq1
410bp
 LAQU0S13e01222g1_1_[Lachancea_quebecensis]
FPKM:0.96 TPM:1.05
2457 A_BomoFB_comp10447_c1_seq1
1450bp
 PREDICTED:_transposable_element_Tcb1_transposase_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006310 P DNA recombination
GO:0006313 P transposition, DNA-mediated
GO:0015074 P DNA integration
FPKM:4.29 TPM:4.70
2458 A_BomoFB_comp104480_c0_seq1
1116bp
 putative_7,8-dihydro-8-oxoguanine-triphosphatase_isoform_1_[Danaus_plexippus]
GO:0000287 F magnesium ion binding
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0009117 P nucleotide metabolic process
GO:0016787 F hydrolase activity
GO:0034656 P nucleobase-containing small molecule catabolic process
GO:0044715 F 8-oxo-dGDP phosphatase activity
GO:0044716 F 8-oxo-GDP phosphatase activity
GO:0044717 F 8-hydroxy-dADP phosphatase activity
GO:0046057 P dADP catabolic process
GO:0046067 P dGDP catabolic process
GO:0046712 P GDP catabolic process
GO:0046872 F metal ion binding
FPKM:3.61 TPM:3.95
2459 A_BomoFB_comp104481_c0_seq1
861bp
 PREDICTED:_protein_purity_of_essence_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005516 F calmodulin binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
FPKM:4.48 TPM:4.91
2460 A_BomoFB_comp104485_c0_seq1
789bp
FPKM:3.31 TPM:3.63
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