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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2401 A_BomoFB_comp10446_c3_seq14
841bp
FPKM:0.00 TPM:0.00
2402 A_BomoFB_comp10446_c3_seq15
315bp
FPKM:0.00 TPM:0.00
2403 A_BomoFB_comp10446_c3_seq16
336bp
FPKM:9.19 TPM:10.07
2404 A_BomoFB_comp10446_c3_seq17
815bp
FPKM:4.21 TPM:4.61
2405 A_BomoFB_comp10446_c3_seq18
2075bp
FPKM:5.06 TPM:5.55
2406 A_BomoFB_comp10446_c3_seq19
935bp
 PREDICTED:_heparin_sulfate_O-sulfotransferase_[Plutella_xylostella]
GO:0000139 C Golgi membrane
GO:0004394 F heparan sulfate 2-O-sulfotransferase activity
GO:0005794 C Golgi apparatus
GO:0007165 P signal transduction
GO:0007424 P open tracheal system development
GO:0008146 F sulfotransferase activity
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
FPKM:8.95 TPM:9.80
2407 A_BomoFB_comp10446_c3_seq2
286bp
FPKM:0.00 TPM:0.00
2408 A_BomoFB_comp10446_c3_seq20
2120bp
 PREDICTED:_cyclin-G1_[Papilio_polytes]
GO:0000711 P meiotic DNA repair synthesis
GO:0003677 F DNA binding
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0006281 P DNA repair
GO:0006302 P double-strand break repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007143 P female meiotic nuclear division
GO:0007275 P multicellular organism development
GO:0016538 F cyclin-dependent protein serine/threonine kinase regulator activity
GO:0040008 P regulation of growth
GO:0045859 P regulation of protein kinase activity
GO:0051301 P cell division
GO:0051321 P meiotic cell cycle
GO:0060429 P epithelium development
GO:2000134 P negative regulation of G1/S transition of mitotic cell cycle
FPKM:15.52 TPM:17.01
2409 A_BomoFB_comp10446_c3_seq21
1263bp
FPKM:0.00 TPM:0.00
2410 A_BomoFB_comp10446_c3_seq22
912bp
FPKM:0.00 TPM:0.00
2411 A_BomoFB_comp10446_c3_seq23
1452bp
 PREDICTED:_heparin_sulfate_O-sulfotransferase_[Amyelois_transitella]
GO:0000139 C Golgi membrane
GO:0004394 F heparan sulfate 2-O-sulfotransferase activity
GO:0005794 C Golgi apparatus
GO:0007165 P signal transduction
GO:0007424 P open tracheal system development
GO:0008146 F sulfotransferase activity
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
FPKM:0.00 TPM:0.00
2412 A_BomoFB_comp10446_c3_seq24
359bp
FPKM:0.00 TPM:0.00
2413 A_BomoFB_comp10446_c3_seq25
1772bp
 hypothetical_protein_NCU09687_[Neurospora_crassa_OR74A]
FPKM:0.00 TPM:0.00
2414 A_BomoFB_comp10446_c3_seq26
841bp
FPKM:0.00 TPM:0.00
2415 A_BomoFB_comp10446_c3_seq27
1547bp
 PREDICTED:_prostamide/prostaglandin_F_synthase-like_[Amyelois_transitella]
GO:0001516 P prostaglandin biosynthetic process
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005829 C cytosol
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0006693 P prostaglandin metabolic process
GO:0008379 F thioredoxin peroxidase activity
GO:0016491 F oxidoreductase activity
GO:0016616 F oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0019371 P cyclooxygenase pathway
GO:0043209 C myelin sheath
GO:0047017 F prostaglandin-F synthase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0070062 C extracellular exosome
GO:0098869 P cellular oxidant detoxification
FPKM:13.94 TPM:15.27
2416 A_BomoFB_comp10446_c3_seq28
885bp
FPKM:4.07 TPM:4.46
2417 A_BomoFB_comp10446_c3_seq29
1452bp
 PREDICTED:_heparin_sulfate_O-sulfotransferase_[Amyelois_transitella]
GO:0000139 C Golgi membrane
GO:0004394 F heparan sulfate 2-O-sulfotransferase activity
GO:0005794 C Golgi apparatus
GO:0007165 P signal transduction
GO:0007424 P open tracheal system development
GO:0008146 F sulfotransferase activity
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
FPKM:0.00 TPM:0.00
2418 A_BomoFB_comp10446_c3_seq3
2928bp
 PREDICTED:_metal_transporter_CNNM4-like_[Papilio_polytes]
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0010960 P magnesium ion homeostasis
GO:0015693 P magnesium ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016323 C basolateral plasma membrane
FPKM:17.58 TPM:19.27
2419 A_BomoFB_comp10446_c3_seq30
3077bp
 PREDICTED:_prostamide/prostaglandin_F_synthase-like_[Amyelois_transitella]
GO:0001516 P prostaglandin biosynthetic process
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005829 C cytosol
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0006693 P prostaglandin metabolic process
GO:0008379 F thioredoxin peroxidase activity
GO:0016491 F oxidoreductase activity
GO:0016616 F oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0019371 P cyclooxygenase pathway
GO:0043209 C myelin sheath
GO:0047017 F prostaglandin-F synthase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0070062 C extracellular exosome
GO:0098869 P cellular oxidant detoxification
FPKM:9.74 TPM:10.67
2420 A_BomoFB_comp10446_c3_seq31
1497bp
 PREDICTED:_heparin_sulfate_O-sulfotransferase_[Amyelois_transitella]
GO:0000139 C Golgi membrane
GO:0004394 F heparan sulfate 2-O-sulfotransferase activity
GO:0005794 C Golgi apparatus
GO:0007165 P signal transduction
GO:0007424 P open tracheal system development
GO:0008146 F sulfotransferase activity
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
FPKM:13.64 TPM:14.94
2421 A_BomoFB_comp10446_c3_seq32
912bp
FPKM:0.00 TPM:0.00
2422 A_BomoFB_comp10446_c3_seq33
2381bp
 PREDICTED:_cyclin-G1_[Papilio_polytes]
GO:0000711 P meiotic DNA repair synthesis
GO:0003677 F DNA binding
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0006281 P DNA repair
GO:0006302 P double-strand break repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007143 P female meiotic nuclear division
GO:0007275 P multicellular organism development
GO:0016538 F cyclin-dependent protein serine/threonine kinase regulator activity
GO:0040008 P regulation of growth
GO:0045859 P regulation of protein kinase activity
GO:0051301 P cell division
GO:0051321 P meiotic cell cycle
GO:0060429 P epithelium development
GO:2000134 P negative regulation of G1/S transition of mitotic cell cycle
FPKM:3.22 TPM:3.53
2423 A_BomoFB_comp10446_c3_seq34
2217bp
 PREDICTED:_prostamide/prostaglandin_F_synthase-like_[Amyelois_transitella]
GO:0001516 P prostaglandin biosynthetic process
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005829 C cytosol
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0006693 P prostaglandin metabolic process
GO:0008379 F thioredoxin peroxidase activity
GO:0016491 F oxidoreductase activity
GO:0016616 F oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0019371 P cyclooxygenase pathway
GO:0043209 C myelin sheath
GO:0047017 F prostaglandin-F synthase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0070062 C extracellular exosome
GO:0098869 P cellular oxidant detoxification
FPKM:3.18 TPM:3.48
2424 A_BomoFB_comp10446_c3_seq35
862bp
FPKM:0.00 TPM:0.00
2425 A_BomoFB_comp10446_c3_seq36
937bp
FPKM:0.00 TPM:0.00
2426 A_BomoFB_comp10446_c3_seq37
1816bp
 hypothetical_protein_NCU09687_[Neurospora_crassa_OR74A]
FPKM:0.00 TPM:0.00
2427 A_BomoFB_comp10446_c3_seq38
1192bp
FPKM:0.00 TPM:0.00
2428 A_BomoFB_comp10446_c3_seq39
666bp
FPKM:72.27 TPM:79.19
2429 A_BomoFB_comp10446_c3_seq4
1803bp
 PREDICTED:_heparin_sulfate_O-sulfotransferase_[Amyelois_transitella]
GO:0000139 C Golgi membrane
GO:0004394 F heparan sulfate 2-O-sulfotransferase activity
GO:0005794 C Golgi apparatus
GO:0007165 P signal transduction
GO:0007424 P open tracheal system development
GO:0008146 F sulfotransferase activity
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
FPKM:0.00 TPM:0.00
2430 A_BomoFB_comp10446_c3_seq40
258bp
FPKM:0.00 TPM:0.00
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