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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2461 A_BomoFB_comp104488_c0_seq1
1376bp
 PREDICTED:_phosphatidylinositol_4-phosphate_3-kinase_C2_domain-containing_subunit_alpha_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005942 C phosphatidylinositol 3-kinase complex
GO:0006661 P phosphatidylinositol biosynthetic process
GO:0006887 P exocytosis
GO:0006897 P endocytosis
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0008286 P insulin receptor signaling pathway
GO:0014829 P vascular associated smooth muscle contraction
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016303 F 1-phosphatidylinositol-3-kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0030136 C clathrin-coated vesicle
GO:0031410 C cytoplasmic vesicle
GO:0031982 C vesicle
GO:0035004 F phosphatidylinositol 3-kinase activity
GO:0035005 F 1-phosphatidylinositol-4-phosphate 3-kinase activity
GO:0035091 F phosphatidylinositol binding
GO:0036092 P phosphatidylinositol-3-phosphate biosynthetic process
GO:0046854 P phosphatidylinositol phosphate biosynthetic process
GO:0048008 P platelet-derived growth factor receptor signaling pathway
GO:0048015 P phosphatidylinositol-mediated signaling
GO:0048268 P clathrin coat assembly
GO:0070062 C extracellular exosome
FPKM:2.96 TPM:3.24
2462 A_BomoFB_comp10448_c0_seq1
279bp
 hypothetical_protein_PV08_11995_[Exophiala_spinifera]
FPKM:7.19 TPM:7.88
2463 A_BomoFB_comp10448_c0_seq2
1630bp
 PREDICTED:_dihydropyrimidinase_isoform_X1_[Bombyx_mori]
GO:0002058 F uracil binding
GO:0002059 F thymine binding
GO:0004157 F dihydropyrimidinase activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006208 P pyrimidine nucleobase catabolic process
GO:0006210 P thymine catabolic process
GO:0006212 P uracil catabolic process
GO:0008270 F zinc ion binding
GO:0016597 F amino acid binding
GO:0016787 F hydrolase activity
GO:0016810 F hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
GO:0019482 P beta-alanine metabolic process
GO:0019860 P uracil metabolic process
GO:0046135 P pyrimidine nucleoside catabolic process
GO:0046872 F metal ion binding
GO:0051219 F phosphoprotein binding
GO:0051260 P protein homooligomerization
GO:0051289 P protein homotetramerization
GO:0070062 C extracellular exosome
FPKM:16.85 TPM:18.46
2464 A_BomoFB_comp10448_c1_seq1
617bp
 PREDICTED:_dihydropyrimidinase_isoform_X1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0007399 P nervous system development
GO:0007411 P axon guidance
GO:0008017 F microtubule binding
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016810 F hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
GO:0030182 P neuron differentiation
GO:0030425 C dendrite
GO:0043025 C neuronal cell body
GO:0043234 C protein-containing complex
FPKM:4.42 TPM:4.84
2465 A_BomoFB_comp10448_c1_seq2
486bp
 PREDICTED:_dihydropyrimidinase_isoform_X1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0007399 P nervous system development
GO:0007411 P axon guidance
GO:0008017 F microtubule binding
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016810 F hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
GO:0030182 P neuron differentiation
GO:0030425 C dendrite
GO:0043025 C neuronal cell body
GO:0043234 C protein-containing complex
FPKM:11.95 TPM:13.09
2466 A_BomoFB_comp10449_c0_seq1
2268bp
 PREDICTED:_hemicentin-1-like_isoform_X1_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0050896 P response to stimulus
FPKM:2.68 TPM:2.94
2467 A_BomoFB_comp10449_c0_seq2
5423bp
 PREDICTED:_hemicentin-1-like_isoform_X1_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0005938 C cell cortex
GO:0007601 P visual perception
GO:0030054 C cell junction
GO:0031012 C extracellular matrix
GO:0050896 P response to stimulus
GO:0070062 C extracellular exosome
FPKM:1.56 TPM:1.71
2468 A_BomoFB_comp10449_c0_seq3
1971bp
 PREDICTED:_hemicentin-1-like_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0005938 C cell cortex
GO:0007601 P visual perception
GO:0030054 C cell junction
GO:0031012 C extracellular matrix
GO:0050896 P response to stimulus
GO:0070062 C extracellular exosome
FPKM:3.10 TPM:3.39
2469 A_BomoFB_comp10449_c0_seq4
5451bp
 PREDICTED:_hemicentin-1-like_isoform_X1_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0005938 C cell cortex
GO:0007601 P visual perception
GO:0030054 C cell junction
GO:0031012 C extracellular matrix
GO:0050896 P response to stimulus
GO:0070062 C extracellular exosome
FPKM:2.33 TPM:2.55
2470 A_BomoFB_comp10449_c0_seq5
2240bp
 PREDICTED:_hemicentin-1-like_isoform_X1_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0050896 P response to stimulus
FPKM:1.39 TPM:1.52
2471 A_BomoFB_comp1044_c0_seq1
212bp
 Uncharacterised_protein_[Chlamydia_trachomatis]
FPKM:4.20 TPM:4.61
2472 A_BomoFB_comp104501_c0_seq1
935bp
 PREDICTED:_DNA_replication_factor_Cdt1_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0007049 P cell cycle
FPKM:3.61 TPM:3.96
2473 A_BomoFB_comp104502_c0_seq1
798bp
FPKM:1.94 TPM:2.13
2474 A_BomoFB_comp10450_c0_seq1
1296bp
 putative_mitogen-activated_protein_kinase_(MAPKK)_[Heliconius_melpomene]
GO:0000165 P MAPK cascade
GO:0000166 F nucleotide binding
GO:0000187 P obsolete activation of MAPK activity
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004702 F obsolete signal transducer, downstream of receptor, with serine/threonine kinase activity
GO:0004708 F MAP kinase kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006468 P protein phosphorylation
GO:0006915 P apoptotic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0019901 F protein kinase binding
GO:0060048 P cardiac muscle contraction
FPKM:9.61 TPM:10.53
2475 A_BomoFB_comp10450_c1_seq1
301bp
 olfactory_receptor_[Bombyx_mori]
FPKM:7.28 TPM:7.98
2476 A_BomoFB_comp10450_c1_seq2
727bp
FPKM:3.59 TPM:3.94
2477 A_BomoFB_comp10450_c2_seq1
709bp
FPKM:14.24 TPM:15.60
2478 A_BomoFB_comp10450_c2_seq10
931bp
FPKM:19.01 TPM:20.83
2479 A_BomoFB_comp10450_c2_seq11
675bp
FPKM:62.78 TPM:68.79
2480 A_BomoFB_comp10450_c2_seq12
2109bp
FPKM:0.00 TPM:0.00
2481 A_BomoFB_comp10450_c2_seq13
943bp
FPKM:65.85 TPM:72.15
2482 A_BomoFB_comp10450_c2_seq14
2773bp
 transketolase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004802 F transketolase activity
GO:0005737 C cytoplasm
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0046872 F metal ion binding
FPKM:60.78 TPM:66.60
2483 A_BomoFB_comp10450_c2_seq15
709bp
FPKM:0.00 TPM:0.00
2484 A_BomoFB_comp10450_c2_seq16
2819bp
FPKM:53.98 TPM:59.14
2485 A_BomoFB_comp10450_c2_seq17
634bp
FPKM:2.98 TPM:3.27
2486 A_BomoFB_comp10450_c2_seq18
2130bp
FPKM:0.00 TPM:0.00
2487 A_BomoFB_comp10450_c2_seq2
2537bp
FPKM:0.00 TPM:0.00
2488 A_BomoFB_comp10450_c2_seq3
2289bp
 glucose-6-phosphate_isomerase_[Bombyx_mori]
GO:0004347 F glucose-6-phosphate isomerase activity
GO:0005737 C cytoplasm
GO:0006094 P gluconeogenesis
GO:0006096 P glycolytic process
GO:0016853 F isomerase activity
FPKM:142.24 TPM:155.85
2489 A_BomoFB_comp10450_c2_seq4
1416bp
FPKM:0.00 TPM:0.00
2490 A_BomoFB_comp10450_c2_seq5
3619bp
 transketolase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004802 F transketolase activity
GO:0005737 C cytoplasm
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0046872 F metal ion binding
FPKM:154.30 TPM:169.06
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