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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2191 A_BomoFB_comp10429_c0_seq2
382bp
 Radical_SAM_family_protein_HutW,_similar_to_coproporphyrinogen_III_oxidase,_oxygen-independent,_associated_with_heme_uptake_[Brenneria_goodwinii]
FPKM:11.72 TPM:12.84
2192 A_BomoFB_comp10429_c0_seq3
2885bp
 PREDICTED:_uncharacterized_protein_LOC101739885_isoform_X2_[Bombyx_mori]
GO:0002221 P pattern recognition receptor signaling pathway
GO:0002376 P immune system process
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005887 C integral component of plasma membrane
GO:0006508 P proteolysis
GO:0006952 P defense response
GO:0006955 P immune response
GO:0006965 P positive regulation of biosynthetic process of antibacterial peptides active against Gram-positive bacteria
GO:0008063 P Toll signaling pathway
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0008329 F pattern recognition receptor activity
GO:0008592 P regulation of Toll signaling pathway
GO:0008745 F N-acetylmuramoyl-L-alanine amidase activity
GO:0009253 P peptidoglycan catabolic process
GO:0016019 F peptidoglycan immune receptor activity
GO:0016045 P detection of bacterium
GO:0016787 F hydrolase activity
GO:0032494 P response to peptidoglycan
GO:0032500 F muramyl dipeptide binding
GO:0042834 F peptidoglycan binding
GO:0045087 P innate immune response
GO:0050830 P defense response to Gram-positive bacterium
FPKM:4.88 TPM:5.34
2193 A_BomoFB_comp10429_c0_seq4
1046bp
FPKM:2.86 TPM:3.13
2194 A_BomoFB_comp10429_c0_seq5
1156bp
 PREDICTED:_peptidoglycan_recognition_protein-like_isoform_X2_[Bombyx_mori]
GO:0002376 P immune system process
GO:0005576 C extracellular region
GO:0005887 C integral component of plasma membrane
GO:0006952 P defense response
GO:0006955 P immune response
GO:0008270 F zinc ion binding
GO:0008745 F N-acetylmuramoyl-L-alanine amidase activity
GO:0009253 P peptidoglycan catabolic process
GO:0016787 F hydrolase activity
GO:0042834 F peptidoglycan binding
GO:0045087 P innate immune response
GO:0045824 P negative regulation of innate immune response
GO:0046872 F metal ion binding
FPKM:2.38 TPM:2.61
2195 A_BomoFB_comp10430_c0_seq1
887bp
 hypothetical_protein_RMATCC62417_08887_[Rhizopus_microsporus]
FPKM:1.47 TPM:1.61
2196 A_BomoFB_comp10430_c1_seq1
1291bp
 PREDICTED:_zinc_finger_protein_OZF_isoform_X4_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
FPKM:8.67 TPM:9.50
2197 A_BomoFB_comp10430_c1_seq2
716bp
 PREDICTED:_gastrula_zinc_finger_protein_XlCGF57.1_isoform_X1_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
FPKM:0.00 TPM:0.00
2198 A_BomoFB_comp10430_c1_seq3
1003bp
 PREDICTED:_gastrula_zinc_finger_protein_XlCGF57.1_isoform_X1_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
FPKM:2.09 TPM:2.29
2199 A_BomoFB_comp10430_c1_seq4
753bp
 PREDICTED:_gastrula_zinc_finger_protein_XlCGF57.1_isoform_X1_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
FPKM:3.95 TPM:4.33
2200 A_BomoFB_comp10430_c1_seq5
580bp
 PREDICTED:_gastrula_zinc_finger_protein_XlCGF57.1_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
GO:0046872 F metal ion binding
FPKM:1.64 TPM:1.80
2201 A_BomoFB_comp10431_c0_seq1
997bp
 PREDICTED:_uncharacterized_protein_LOC105841315_[Bombyx_mori]
FPKM:11.51 TPM:12.61
2202 A_BomoFB_comp10431_c0_seq2
570bp
 PREDICTED:_uncharacterized_protein_LOC105841315_[Bombyx_mori]
FPKM:2.82 TPM:3.09
2203 A_BomoFB_comp10431_c0_seq3
882bp
 PREDICTED:_uncharacterized_protein_LOC105841315_[Bombyx_mori]
FPKM:1.86 TPM:2.04
2204 A_BomoFB_comp10431_c0_seq4
428bp
 PREDICTED:_uncharacterized_protein_LOC105841315_[Bombyx_mori]
FPKM:1.11 TPM:1.22
2205 A_BomoFB_comp10431_c0_seq5
317bp
 PREDICTED:_uncharacterized_protein_LOC105841315_[Bombyx_mori]
FPKM:1.34 TPM:1.46
2206 A_BomoFB_comp10432_c0_seq1
1439bp
 PREDICTED:_methenyltetrahydrofolate_synthase_domain-containing_protein_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
FPKM:18.98 TPM:20.79
2207 A_BomoFB_comp10433_c0_seq1
4327bp
 PREDICTED:_protein_piccolo-like_[Bombyx_mori]
FPKM:4.15 TPM:4.55
2208 A_BomoFB_comp10433_c0_seq2
3956bp
 PREDICTED:_protein_piccolo-like_[Bombyx_mori]
FPKM:8.65 TPM:9.48
2209 A_BomoFB_comp10433_c0_seq3
5514bp
 PREDICTED:_protein_piccolo-like_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004721 F phosphoprotein phosphatase activity
GO:0004722 F protein serine/threonine phosphatase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006469 P negative regulation of protein kinase activity
GO:0006470 P protein dephosphorylation
GO:0016787 F hydrolase activity
GO:0035690 P cellular response to xenobiotic stimulus
GO:0035970 P peptidyl-threonine dephosphorylation
GO:0043169 F cation binding
GO:0043234 C protein-containing complex
GO:0046872 F metal ion binding
GO:0051496 P positive regulation of stress fiber assembly
FPKM:4.74 TPM:5.19
2210 A_BomoFB_comp1043472_c0_seq1
201bp
 kinesin-like_protein_7_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000278 P mitotic cell cycle
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000777 C kinetochore
GO:0000778 C kinetochore
GO:0000779 C condensed chromosome, centromeric region
GO:0000940 C outer kinetochore
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0005871 C kinesin complex
GO:0005874 C microtubule
GO:0007018 P microtubule-based movement
GO:0007049 P cell cycle
GO:0007059 P chromosome segregation
GO:0007067 P mitotic cell cycle
GO:0007080 P mitotic metaphase plate congression
GO:0007088 P regulation of mitotic nuclear division
GO:0007094 P mitotic spindle assembly checkpoint signaling
GO:0007275 P multicellular organism development
GO:0008017 F microtubule binding
GO:0008152 P metabolic process
GO:0008608 P attachment of spindle microtubules to kinetochore
GO:0015630 C microtubule cytoskeleton
GO:0016020 C membrane
GO:0016887 F ATP hydrolysis activity
GO:0019901 F protein kinase binding
GO:0030071 P regulation of mitotic metaphase/anaphase transition
GO:0030496 C midbody
GO:0043515 F kinetochore binding
GO:0045184 P establishment of protein localization
GO:0045842 P positive regulation of mitotic metaphase/anaphase transition
GO:0045860 P positive regulation of protein kinase activity
GO:0050793 P regulation of developmental process
GO:0051301 P cell division
GO:0051315 P attachment of mitotic spindle microtubules to kinetochore
GO:0051984 P positive regulation of chromosome segregation
GO:0051987 P positive regulation of attachment of spindle microtubules to kinetochore
GO:1990023 C mitotic spindle midzone
FPKM:0.00 TPM:0.00
2211 A_BomoFB_comp104348_c0_seq1
514bp
FPKM:2.62 TPM:2.88
2212 A_BomoFB_comp10434_c2_seq1
568bp
 hikaru_genki_[Bombyx_mori]
FPKM:0.00 TPM:0.00
2213 A_BomoFB_comp10434_c2_seq10
993bp
 hikaru_genki_[Bombyx_mori]
FPKM:1.88 TPM:2.06
2214 A_BomoFB_comp10434_c2_seq11
1084bp
 hikaru_genki_[Bombyx_mori]
FPKM:0.00 TPM:0.00
2215 A_BomoFB_comp10434_c2_seq12
1102bp
 Dynein_heavy_chain_17,_axonemal_[Exaiptasia_pallida]
FPKM:0.00 TPM:0.00
2216 A_BomoFB_comp10434_c2_seq13
544bp
 hikaru_genki_[Bombyx_mori]
FPKM:5.26 TPM:5.77
2217 A_BomoFB_comp10434_c2_seq2
673bp
 hikaru_genki_[Bombyx_mori]
FPKM:0.00 TPM:0.00
2218 A_BomoFB_comp10434_c2_seq3
1116bp
 Dynein_heavy_chain_17,_axonemal_[Exaiptasia_pallida]
FPKM:0.00 TPM:0.00
2219 A_BomoFB_comp10434_c2_seq4
979bp
 hikaru_genki_[Bombyx_mori]
FPKM:1.20 TPM:1.32
2220 A_BomoFB_comp10434_c2_seq5
667bp
 Dynein_heavy_chain_17,_axonemal_[Exaiptasia_pallida]
FPKM:1.68 TPM:1.84
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