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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp10429_c0_seq3
Scaffold_idBomo_Scaf022
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC101739885_isoform_X2_[Bombyx_mori]
Ontology
GO:0002221 P pattern recognition receptor signaling pathway
GO:0002376 P immune system process
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005887 C integral component of plasma membrane
GO:0006508 P proteolysis
GO:0006952 P defense response
GO:0006955 P immune response
GO:0006965 P positive regulation of biosynthetic process of antibacterial peptides active against Gram-positive bacteria
GO:0008063 P Toll signaling pathway
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0008329 F pattern recognition receptor activity
GO:0008592 P regulation of Toll signaling pathway
GO:0008745 F N-acetylmuramoyl-L-alanine amidase activity
GO:0009253 P peptidoglycan catabolic process
GO:0016019 F peptidoglycan immune receptor activity
GO:0016045 P detection of bacterium
GO:0016787 F hydrolase activity
GO:0032494 P response to peptidoglycan
GO:0032500 F muramyl dipeptide binding
GO:0042834 F peptidoglycan binding
GO:0045087 P innate immune response
GO:0050830 P defense response to Gram-positive bacterium
Transcript
Level		FPKM:4.88 TPM:5.34
ORF EntryO_BomoFB13805_complete:A_BomoFB_comp10429_c0_seq3
Sequence
(Nucleotide)
GAAAAACGTAGAGAGCCGTCGTCTGAGTGGTTAATCATCTCGGTGCGTCATTCCATTGTT
TTCTGTGTATGTGTGTGCGTGTGTTGTGTTTTTCTTGTTTTGTTTTAAGTGCTAGCCATG
AAGAGTGATGGTGATGAAAATCCTAAACACGAGACGAAAAGCCCGCCTCCTATCAGCTCT
GACGTAGCTGTAGTGGACGACAGAATAATGGCAGTTGCAACGCAAGCTGCGAGTTCGACG
CCTATATCACAACTCAATGTAACAAAGTCGTCACGGGTCCATATCGGACCCAAGTTCATA
TCAGTAACTCAAACCGTCAGGAATACAGAAGAAATCAAAGAACTTCCACTGCCGCGCTTC
ATATGGAAAGTGTTGAAGAATACAAGTAGAGTGGAAAGATCGCTATGTGCTGCTGCTGTT
TCAGCTTTAATCATATGTATAGCGTTGACACTTTACTTCACACTGTCAGCCAAGGCGACC
ACTGACGACGATGTTGCACCTCACCCATGGAACATCTCTAGAGATATGTGGCTGGCCAAG
AAGTACAATGGGTCAGAAGCAATTACACAGTTTGTGCCGTTGCGACTGGTCATCGTCCAA
CACACGGTGAGCGCGAAATGCTCCAACTTTATCACGTGTGCGGCCGAAGTCCGGATCATC
CAAACGTTTTATTTGGAAAAACAAAAATATGACATTCCTTACAATTTCATAATTGGCAAC
GACAATAGAGTTTATGAAGGACGCGGTTGGGGCATTATGGGAGCACATACTTTATCTTAT
AATAGCTGTTCGGTCGGTGTGGCTTTTATAGGTGATTACCGCGAGCTGGAAGCCACAGAT
CTTCAGATTAATAGAACACAGATGTTACTTGACGACGGCGTAAGAAGGGGTTTCCTACAT
CCCGATTACTATATTGTTGGTGCTTGTGATATCCGTGAAACAGTCAGTCCGGGAATCAAC
CTGTATAATGCCTTAAAAAAATTGAAGCATTTTGATCACAGCGGACGTTTCAAACACAAA
ACTTGTACGCAAATCTATGCAATGATCGAAAGTGAAAACTAAATGTGCCACTACTTTTAA
TATTAGTTCGTTTTAAGCATATTTTTACTATAAAGATATGGAGTTAAAGTGAATCTTGAT
CATAATAACAGATCGTAAAGGATTTTTGATCGGTCCTTACTATAATTATATTCGACACTA
TTGTCCAATTAACGGCAAACGAAAGCTTATACTGTTAATGTTTTTATCAAAACCATTCAA
ATCTACGAAATAAATGACTATAACGTATTTTTTATCTATAGCAAACGTTTACCAAACATT
TGTTTAGGCAAATTAATACGTCAATTTATAATCCCGAATCAATGAGAAGTTGTCATCGTT
CAAATTCAAAGTTCATGTAAGTCGTGTAGTTTTTGTGAATTTCTTGTGAATTTTGTGCAA
CTGTAGACGCCGCAAAAGCATCACGAAACATTGAAGGCAAAGCACCGGCCCAGTACCGAG
TCTATAATTTAAGACTATAAATATGCACGATAGAATAAGATGAAGATAATAACAATAATA
ATACAGAGATTAAGATAATAATAAGAACAATCTATCCTAGTAGGTGCACGGTAATGTTTC
GTATGTACTAGTATAGTTTGATGCGGAAATGCTCTATTGATATTTGCTAGATGATGTGTG
GAAGAAGATTGACAAATTGAAGCCCTCAAACTACAAGTTGAACAGACAAACAACTAGACG
AATAAATTAAAGCATCTGTTAATTTTAAAAGCTTTATTTTAGTAAAAGATCTTATATTGT
ACAATAGATCGACCTCATAATATGTCAGTGCTAAGAAAAGAAACGATGCATCTATCTATG
AAATCACAAATAATATGTTAAATGTTTATTCAGAGATTCCTTTATGATATTTTGCTCTGG
AATACTTTGATTTGACAGATTGACAAGATTGTGGGTTGTGTTGTGTTTGTGGGTTAAGTT
GCACATTAAATATTTTTATTCGTCGACAACGGTGCTTGGAATGCCTAAAAGCAACGAGAG
TGAATTGGTAGGATCCGAAATGACATGTTTTCGGCGACAGCGACTATATGTTATCCGAAC
GTGTATCAGATCGGGTATGAAATCCATTAAAGTTTTCAGATTAGATTAGAGATTATGTTT
TTGTACGACAAATTCTATACAATGTAGAACTCAGAACAATATCCTGCGTAATGAAACCTA
CGCTGCTTGCATTAATCGAGAATATACAATTACCAAAACAAAATCGATGACTTTTCTCCC
AACCCTTATAAGACAATTTTAATTATTGTTGTATTGTAATGTAAATCATAAGGTGTCAGT
AAATATTGTTGAATTTCGCTAAGGGGCTAATAGTACTGAAGACGATAATGATACAAATTC
CAGCTTTTATATAATTTCAGTGAATAATATTTTATGGATTATGGATGGAAATACGTGAAG
CAAAAACTTTTTACCCCTTTTTGCGAAAGTTGCGTGGACAGGGGATAATAAAACTTCCCA
CACTTAGCGCCTGGCCACGGGGATCGGCGGGGCGAACAGCGAAGCGGTGGGCGAGGCGAC
CATTCGCGCAGCACCGTTTGCAGGCCACGGGTACTCACGTTCGCCGCCGCGACTAGTAAG
GAAGTCCGACAGCGAAATGTCTATATCGAAATTATCTCGATATTGCTTACAAATTAATAG
TTTTTTGGTTCAGGACCTATTATTTGGAAAAGATTGTGAAGTACATGATTTGAATAAGAA
TCGGAGTATACCTATAGATGGAGAATTCCACAAGAAGTACGAGAAATACTTTGGGTGGCT
AGACTTCCAAATAGCTGGTCTAGCTAGTATTTCAGCTATTTTATTTTTTTATTGCTTAGA
TGGGT
(2885 bp)

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