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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1951 A_BomoFB_comp10401_c1_seq1
2747bp
 H+_transporting_ATP_synthase_beta_subunit_isoform_2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000275 C mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1)
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005811 C lipid droplet
GO:0006754 P ATP biosynthetic process
GO:0006810 P transport
GO:0006811 P ion transport
GO:0010906 P regulation of glucose metabolic process
GO:0015986 P ATP synthesis coupled proton transport
GO:0015991 P proton transmembrane transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0016820 F ATPase-coupled transmembrane transporter activity
GO:0033178 C proton-transporting two-sector ATPase complex, catalytic domain
GO:0045261 C proton-transporting ATP synthase complex, catalytic core F(1)
GO:0046034 P ATP metabolic process
GO:0046331 P lateral inhibition
GO:0046933 F proton-transporting ATP synthase activity, rotational mechanism
GO:0046961 F proton-transporting ATPase activity, rotational mechanism
FPKM:32.36 TPM:35.46
1952 A_BomoFB_comp10401_c1_seq2
2684bp
 H+_transporting_ATP_synthase_beta_subunit_isoform_2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000275 C mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1)
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005811 C lipid droplet
GO:0006754 P ATP biosynthetic process
GO:0006810 P transport
GO:0006811 P ion transport
GO:0010906 P regulation of glucose metabolic process
GO:0015986 P ATP synthesis coupled proton transport
GO:0015991 P proton transmembrane transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0016820 F ATPase-coupled transmembrane transporter activity
GO:0033178 C proton-transporting two-sector ATPase complex, catalytic domain
GO:0045261 C proton-transporting ATP synthase complex, catalytic core F(1)
GO:0046034 P ATP metabolic process
GO:0046331 P lateral inhibition
GO:0046933 F proton-transporting ATP synthase activity, rotational mechanism
GO:0046961 F proton-transporting ATPase activity, rotational mechanism
FPKM:55.79 TPM:61.13
1953 A_BomoFB_comp10401_c1_seq3
1715bp
 H+_transporting_ATP_synthase_beta_subunit_isoform_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000275 C mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1)
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005811 C lipid droplet
GO:0006754 P ATP biosynthetic process
GO:0006810 P transport
GO:0006811 P ion transport
GO:0010906 P regulation of glucose metabolic process
GO:0015986 P ATP synthesis coupled proton transport
GO:0015991 P proton transmembrane transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0016820 F ATPase-coupled transmembrane transporter activity
GO:0033178 C proton-transporting two-sector ATPase complex, catalytic domain
GO:0045261 C proton-transporting ATP synthase complex, catalytic core F(1)
GO:0046034 P ATP metabolic process
GO:0046331 P lateral inhibition
GO:0046933 F proton-transporting ATP synthase activity, rotational mechanism
GO:0046961 F proton-transporting ATPase activity, rotational mechanism
FPKM:280.45 TPM:307.30
1954 A_BomoFB_comp10401_c1_seq4
1778bp
 H+_transporting_ATP_synthase_beta_subunit_isoform_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000275 C mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1)
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005811 C lipid droplet
GO:0006754 P ATP biosynthetic process
GO:0006810 P transport
GO:0006811 P ion transport
GO:0010906 P regulation of glucose metabolic process
GO:0015986 P ATP synthesis coupled proton transport
GO:0015991 P proton transmembrane transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0016820 F ATPase-coupled transmembrane transporter activity
GO:0033178 C proton-transporting two-sector ATPase complex, catalytic domain
GO:0045261 C proton-transporting ATP synthase complex, catalytic core F(1)
GO:0046034 P ATP metabolic process
GO:0046331 P lateral inhibition
GO:0046933 F proton-transporting ATP synthase activity, rotational mechanism
GO:0046961 F proton-transporting ATPase activity, rotational mechanism
FPKM:199.91 TPM:219.04
1955 A_BomoFB_comp10402_c0_seq1
203bp
 eukaryotic_porin_protein_[Tetrahymena_thermophila_SB210]
FPKM:13.58 TPM:14.88
1956 A_BomoFB_comp10402_c1_seq1
281bp
 PREDICTED:_uncharacterized_protein_LOC106132556_[Amyelois_transitella]
FPKM:1.63 TPM:1.78
1957 A_BomoFB_comp10402_c2_seq1
2824bp
FPKM:0.14 TPM:0.15
1958 A_BomoFB_comp10402_c2_seq10
1162bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:0.00 TPM:0.00
1959 A_BomoFB_comp10402_c2_seq11
331bp
 hypothetical_protein_[Rhizobium_sp._Root708]
FPKM:0.79 TPM:0.87
1960 A_BomoFB_comp10402_c2_seq12
574bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:0.42 TPM:0.46
1961 A_BomoFB_comp10402_c2_seq13
711bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:0.00 TPM:0.00
1962 A_BomoFB_comp10402_c2_seq14
2984bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:0.39 TPM:0.43
1963 A_BomoFB_comp10402_c2_seq15
454bp
FPKM:0.83 TPM:0.91
1964 A_BomoFB_comp10402_c2_seq16
257bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:1.40 TPM:1.54
1965 A_BomoFB_comp10402_c2_seq2
3435bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:3.93 TPM:4.31
1966 A_BomoFB_comp10402_c2_seq3
2944bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:0.12 TPM:0.13
1967 A_BomoFB_comp10402_c2_seq4
551bp
FPKM:4.36 TPM:4.78
1968 A_BomoFB_comp10402_c2_seq5
671bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:0.61 TPM:0.67
1969 A_BomoFB_comp10402_c2_seq6
335bp
 hypothetical_protein_[Rhizobium_sp._Root708]
FPKM:3.85 TPM:4.22
1970 A_BomoFB_comp10402_c2_seq7
494bp
FPKM:1.54 TPM:1.68
1971 A_BomoFB_comp10402_c2_seq8
292bp
FPKM:0.98 TPM:1.08
1972 A_BomoFB_comp10402_c2_seq9
614bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:0.00 TPM:0.00
1973 A_BomoFB_comp10403_c0_seq1
1753bp
 Aspartyl-tRNA_synthetase,_mitochondrial_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004815 F aspartate-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0016874 F ligase activity
FPKM:4.67 TPM:5.12
1974 A_BomoFB_comp10403_c0_seq2
508bp
 PREDICTED:_aspartate--tRNA_ligase,_mitochondrial_[Amyelois_transitella]
GO:0000049 F tRNA binding
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004815 F aspartate-tRNA ligase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0016874 F ligase activity
GO:0042803 F protein homodimerization activity
GO:0043039 P tRNA aminoacylation
GO:0050560 F aspartate-tRNA(Asn) ligase activity
GO:0070145 P mitochondrial asparaginyl-tRNA aminoacylation
FPKM:1.34 TPM:1.46
1975 A_BomoFB_comp104042_c0_seq1
858bp
 PREDICTED:_nucleolar_complex_protein_4_homolog_B_isoform_X2_[Bombyx_mori]
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030692 C Noc4p-Nop14p complex
GO:0031965 C nuclear membrane
GO:0032040 C small-subunit processome
GO:0042254 P ribosome biogenesis
FPKM:3.54 TPM:3.88
1976 A_BomoFB_comp10404_c0_seq1
351bp
hypothetical_protein_QS5_0359_[Clostridium_difficile_P15]
FPKM:0.00 TPM:0.00
1977 A_BomoFB_comp10404_c0_seq10
682bp
hypothetical_protein_BVRB_042430,_partial_[Beta_vulgaris_subsp._vulgaris]
GO:0009507 C chloroplast
GO:0009536 C plastid
FPKM:0.00 TPM:0.00
1978 A_BomoFB_comp10404_c0_seq11
751bp
hypothetical_protein_[uncultured_alpha_proteobacterium_HF0070_14E07]
FPKM:0.82 TPM:0.90
1979 A_BomoFB_comp10404_c0_seq12
676bp
hypothetical_protein_Csp_D29540_[Curvibacter_putative_symbiont_of_Hydra_magnipapillata]
GO:0009507 C chloroplast
GO:0009536 C plastid
FPKM:0.00 TPM:0.00
1980 A_BomoFB_comp10404_c0_seq13
2095bp
putative_membrane_protein_[Burkholderia_sp._RPE67]
GO:0009507 C chloroplast
GO:0009536 C plastid
FPKM:3.15 TPM:3.45
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