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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1921 A_BomoFB_comp10398_c3_seq19
678bp
FPKM:0.57 TPM:0.63
1922 A_BomoFB_comp10398_c3_seq2
645bp
FPKM:0.00 TPM:0.00
1923 A_BomoFB_comp10398_c3_seq20
784bp
FPKM:1.09 TPM:1.19
1924 A_BomoFB_comp10398_c3_seq21
919bp
FPKM:0.00 TPM:0.00
1925 A_BomoFB_comp10398_c3_seq22
667bp
FPKM:9.53 TPM:10.44
1926 A_BomoFB_comp10398_c3_seq23
526bp
FPKM:0.16 TPM:0.18
1927 A_BomoFB_comp10398_c3_seq24
1074bp
FPKM:0.57 TPM:0.63
1928 A_BomoFB_comp10398_c3_seq25
991bp
 PREDICTED:_phosphatidylinositol-binding_clathrin_assembly_protein_LAP_isoform_X10_[Papilio_machaon]
FPKM:2.61 TPM:2.86
1929 A_BomoFB_comp10398_c3_seq26
459bp
 hypothetical_protein_[Paenibacillus_darwinianus]
FPKM:3.70 TPM:4.05
1930 A_BomoFB_comp10398_c3_seq27
230bp
FPKM:4.06 TPM:4.45
1931 A_BomoFB_comp10398_c3_seq3
438bp
FPKM:0.75 TPM:0.82
1932 A_BomoFB_comp10398_c3_seq4
490bp
FPKM:3.68 TPM:4.03
1933 A_BomoFB_comp10398_c3_seq5
800bp
FPKM:0.69 TPM:0.75
1934 A_BomoFB_comp10398_c3_seq6
829bp
 PREDICTED:_uncharacterized_protein_LOC103961162_[Pyrus_x_bretschneideri]
FPKM:0.00 TPM:0.00
1935 A_BomoFB_comp10398_c3_seq7
892bp
 PREDICTED:_uncharacterized_protein_LOC103961162_[Pyrus_x_bretschneideri]
FPKM:1.68 TPM:1.85
1936 A_BomoFB_comp10398_c3_seq8
629bp
FPKM:0.74 TPM:0.81
1937 A_BomoFB_comp10398_c3_seq9
244bp
 hypothetical_protein_[Catelliglobosispora_koreensis]
FPKM:0.83 TPM:0.91
1938 A_BomoFB_comp10398_c4_seq1
293bp
 PREDICTED:_GMP_reductase_1_[Chelonia_mydas]
FPKM:0.49 TPM:0.53
1939 A_BomoFB_comp10398_c5_seq1
355bp
FPKM:8.50 TPM:9.32
1940 A_BomoFB_comp10398_c6_seq1
300bp
FPKM:0.92 TPM:1.01
1941 A_BomoFB_comp103997_c0_seq1
338bp
FPKM:0.70 TPM:0.76
1942 A_BomoFB_comp10399_c0_seq1
3556bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_membrane-associated_protein_Hem_[Bombyx_mori]
GO:0000902 P cell morphogenesis
GO:0001555 P oocyte growth
GO:0001764 P neuron migration
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006909 P phagocytosis
GO:0007010 P cytoskeleton organization
GO:0007409 P axonogenesis
GO:0007417 P central nervous system development
GO:0007520 P myoblast fusion
GO:0007528 P neuromuscular junction development
GO:0008360 P regulation of cell shape
GO:0008407 P chaeta morphogenesis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030031 P cell projection assembly
GO:0030036 P actin cytoskeleton organization
GO:0030866 P cortical actin cytoskeleton organization
GO:0031209 C SCAR complex
GO:0033627 P cell adhesion mediated by integrin
FPKM:4.47 TPM:4.90
1943 A_BomoFB_comp103_c0_seq1
378bp
FPKM:1.39 TPM:1.52
1944 A_BomoFB_comp103_c0_seq2
237bp
FPKM:1.83 TPM:2.00
1945 A_BomoFB_comp104008_c0_seq1
531bp
FPKM:1.72 TPM:1.88
1946 A_BomoFB_comp10400_c0_seq1
345bp
 PREDICTED:_uncharacterized_protein_LOC105841512_[Bombyx_mori]
FPKM:4.68 TPM:5.12
1947 A_BomoFB_comp10400_c0_seq2
275bp
 PREDICTED:_uncharacterized_protein_LOC105841512_[Bombyx_mori]
FPKM:1.73 TPM:1.89
1948 A_BomoFB_comp10400_c0_seq3
2165bp
 PREDICTED:_uncharacterized_protein_LOC105841512_[Bombyx_mori]
FPKM:7.59 TPM:8.31
1949 A_BomoFB_comp10400_c0_seq4
2501bp
FPKM:3.88 TPM:4.25
1950 A_BomoFB_comp10401_c0_seq1
463bp
 PREDICTED:_U3_small_nucleolar_RNA-interacting_protein_2_[Amyelois_transitella]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0030515 F snoRNA binding
GO:0030529 C ribonucleoprotein complex
GO:0031428 C box C/D RNP complex
GO:0032040 C small-subunit processome
GO:0034511 F U3 snoRNA binding
GO:0044822 F RNA binding
FPKM:4.07 TPM:4.46
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