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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1981 A_BomoFB_comp10404_c0_seq14
1557bp
Cell_wall-associated_hydrolase_[Candidatus_Burkholderia_brachyanthoides]
GO:0009507 C chloroplast
GO:0009536 C plastid
FPKM:0.55 TPM:0.61
1982 A_BomoFB_comp10404_c0_seq2
419bp
hypothetical_protein_SI859A1_01496_[Aurantimonas_manganoxydans_SI85-9A1]
FPKM:0.86 TPM:0.94
1983 A_BomoFB_comp10404_c0_seq3
763bp
hypothetical_protein_APECO1_1785_[Escherichia_coli_APEC_O1]
GO:0009507 C chloroplast
GO:0009536 C plastid
FPKM:0.34 TPM:0.37
1984 A_BomoFB_comp10404_c0_seq4
1556bp
putative_membrane_protein_[Burkholderia_sp._RPE67]
GO:0009507 C chloroplast
GO:0009536 C plastid
FPKM:2.35 TPM:2.58
1985 A_BomoFB_comp10404_c0_seq5
769bp
hypothetical_protein_BVRB_042430,_partial_[Beta_vulgaris_subsp._vulgaris]
GO:0009507 C chloroplast
GO:0009536 C plastid
FPKM:2.56 TPM:2.81
1986 A_BomoFB_comp10404_c0_seq6
1149bp
putative_membrane_protein_[Burkholderia_sp._RPE67]
GO:0009507 C chloroplast
GO:0009536 C plastid
FPKM:0.00 TPM:0.00
1987 A_BomoFB_comp10404_c0_seq7
1333bp
putative_membrane_protein_[Burkholderia_sp._RPE67]
GO:0009507 C chloroplast
GO:0009536 C plastid
FPKM:1.04 TPM:1.14
1988 A_BomoFB_comp10404_c0_seq8
274bp
hypothetical_protein_AT53_00650_[Streptococcus_equi_subsp._zooepidemicus_Sz5]
FPKM:1.74 TPM:1.91
1989 A_BomoFB_comp10404_c0_seq9
1029bp
hypothetical_protein_SI859A1_01496_[Aurantimonas_manganoxydans_SI85-9A1]
FPKM:0.62 TPM:0.68
1990 A_BomoFB_comp10404_c1_seq1
289bp
conserved_hypothetical_protein_[Magnetospirillum_gryphiswaldense_MSR-1]
FPKM:17.14 TPM:18.78
1991 A_BomoFB_comp10405_c0_seq1
228bp
 PREDICTED:_zinc_finger_protein_583-like,_partial_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001158 F cis-regulatory region sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0008340 P determination of adult lifespan
GO:0040035 P hermaphrodite genitalia development
GO:0043053 P dauer entry
GO:0045684 P positive regulation of epidermis development
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:1903355 P negative regulation of distal tip cell migration
FPKM:6.29 TPM:6.90
1992 A_BomoFB_comp10405_c0_seq2
1236bp
 PREDICTED:_zinc_finger_protein_112-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
FPKM:2.11 TPM:2.32
1993 A_BomoFB_comp10405_c0_seq3
421bp
 hypothetical_protein_FF38_03764_[Lucilia_cuprina]
FPKM:0.00 TPM:0.00
1994 A_BomoFB_comp104061_c0_seq1
1535bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_integrator_complex_subunit_8_[Bombyx_mori]
GO:0005634 C nucleus
FPKM:2.41 TPM:2.64
1995 A_BomoFB_comp10406_c0_seq1
211bp
FPKM:1.43 TPM:1.57
1996 A_BomoFB_comp10406_c0_seq10
1095bp
 PREDICTED:_dynactin_subunit_6_[Amyelois_transitella]
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000777 C kinetochore
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005869 C dynactin complex
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0019886 P antigen processing and presentation of exogenous peptide antigen via MHC class II
FPKM:6.79 TPM:7.44
1997 A_BomoFB_comp10406_c0_seq11
742bp
 PREDICTED:_uncharacterized_protein_LOC101737268_isoform_X2_[Bombyx_mori]
FPKM:1.92 TPM:2.11
1998 A_BomoFB_comp10406_c0_seq12
1859bp
 PREDICTED:_dynactin_subunit_6_[Amyelois_transitella]
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000777 C kinetochore
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005869 C dynactin complex
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0019886 P antigen processing and presentation of exogenous peptide antigen via MHC class II
FPKM:0.00 TPM:0.00
1999 A_BomoFB_comp10406_c0_seq13
1846bp
 PREDICTED:_GDP-mannose_4,6_dehydratase_[Papilio_machaon]
GO:0007219 P Notch signaling pathway
GO:0008446 F GDP-mannose 4,6-dehydratase activity
GO:0016829 F lyase activity
GO:0019673 P GDP-mannose metabolic process
GO:0042350 P GDP-L-fucose biosynthetic process
GO:0042351 P 'de novo' GDP-L-fucose biosynthetic process
GO:0048477 P oogenesis
GO:2000035 P regulation of stem cell division
FPKM:0.00 TPM:0.00
2000 A_BomoFB_comp10406_c0_seq14
1752bp
 PREDICTED:_GDP-mannose_4,6_dehydratase_[Papilio_machaon]
GO:0007219 P Notch signaling pathway
GO:0008446 F GDP-mannose 4,6-dehydratase activity
GO:0016829 F lyase activity
GO:0019673 P GDP-mannose metabolic process
GO:0042350 P GDP-L-fucose biosynthetic process
GO:0042351 P 'de novo' GDP-L-fucose biosynthetic process
GO:0048477 P oogenesis
GO:2000035 P regulation of stem cell division
FPKM:0.00 TPM:0.00
2001 A_BomoFB_comp10406_c0_seq15
2219bp
 PREDICTED:_GDP-mannose_4,6_dehydratase_[Papilio_machaon]
GO:0007219 P Notch signaling pathway
GO:0008446 F GDP-mannose 4,6-dehydratase activity
GO:0016829 F lyase activity
GO:0019673 P GDP-mannose metabolic process
GO:0042350 P GDP-L-fucose biosynthetic process
GO:0042351 P 'de novo' GDP-L-fucose biosynthetic process
GO:0048477 P oogenesis
GO:2000035 P regulation of stem cell division
FPKM:0.00 TPM:0.00
2002 A_BomoFB_comp10406_c0_seq16
2641bp
 PREDICTED:_GDP-mannose_4,6_dehydratase_[Papilio_machaon]
GO:0007219 P Notch signaling pathway
GO:0008446 F GDP-mannose 4,6-dehydratase activity
GO:0016829 F lyase activity
GO:0019673 P GDP-mannose metabolic process
GO:0042350 P GDP-L-fucose biosynthetic process
GO:0042351 P 'de novo' GDP-L-fucose biosynthetic process
GO:0048477 P oogenesis
GO:2000035 P regulation of stem cell division
FPKM:1.09 TPM:1.19
2003 A_BomoFB_comp10406_c0_seq17
2547bp
 PREDICTED:_GDP-mannose_4,6_dehydratase_[Papilio_machaon]
GO:0007219 P Notch signaling pathway
GO:0008446 F GDP-mannose 4,6-dehydratase activity
GO:0016829 F lyase activity
GO:0019673 P GDP-mannose metabolic process
GO:0042350 P GDP-L-fucose biosynthetic process
GO:0042351 P 'de novo' GDP-L-fucose biosynthetic process
GO:0048477 P oogenesis
GO:2000035 P regulation of stem cell division
FPKM:0.61 TPM:0.67
2004 A_BomoFB_comp10406_c0_seq18
2610bp
 PREDICTED:_GDP-mannose_4,6_dehydratase_[Papilio_machaon]
GO:0007219 P Notch signaling pathway
GO:0008446 F GDP-mannose 4,6-dehydratase activity
GO:0016829 F lyase activity
GO:0019673 P GDP-mannose metabolic process
GO:0042350 P GDP-L-fucose biosynthetic process
GO:0042351 P 'de novo' GDP-L-fucose biosynthetic process
GO:0048477 P oogenesis
GO:2000035 P regulation of stem cell division
FPKM:0.27 TPM:0.30
2005 A_BomoFB_comp10406_c0_seq19
1562bp
 PREDICTED:_dynactin_subunit_6_[Amyelois_transitella]
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000777 C kinetochore
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005869 C dynactin complex
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0019886 P antigen processing and presentation of exogenous peptide antigen via MHC class II
FPKM:0.00 TPM:0.00
2006 A_BomoFB_comp10406_c0_seq2
2313bp
 PREDICTED:_GDP-mannose_4,6_dehydratase_[Papilio_machaon]
GO:0007219 P Notch signaling pathway
GO:0008446 F GDP-mannose 4,6-dehydratase activity
GO:0016829 F lyase activity
GO:0019673 P GDP-mannose metabolic process
GO:0042350 P GDP-L-fucose biosynthetic process
GO:0042351 P 'de novo' GDP-L-fucose biosynthetic process
GO:0048477 P oogenesis
GO:2000035 P regulation of stem cell division
FPKM:0.70 TPM:0.77
2007 A_BomoFB_comp10406_c0_seq3
295bp
 PREDICTED:_uncharacterized_protein_LOC101737268_isoform_X2_[Bombyx_mori]
FPKM:1.53 TPM:1.68
2008 A_BomoFB_comp10406_c0_seq4
264bp
 PREDICTED:_uncharacterized_protein_LOC101737268_isoform_X2_[Bombyx_mori]
FPKM:0.00 TPM:0.00
2009 A_BomoFB_comp10406_c0_seq5
2516bp
 PREDICTED:_GDP-mannose_4,6_dehydratase_[Papilio_machaon]
GO:0007219 P Notch signaling pathway
GO:0008446 F GDP-mannose 4,6-dehydratase activity
GO:0016829 F lyase activity
GO:0019673 P GDP-mannose metabolic process
GO:0042350 P GDP-L-fucose biosynthetic process
GO:0042351 P 'de novo' GDP-L-fucose biosynthetic process
GO:0048477 P oogenesis
GO:2000035 P regulation of stem cell division
FPKM:0.00 TPM:0.00
2010 A_BomoFB_comp10406_c0_seq6
1877bp
 PREDICTED:_GDP-mannose_4,6_dehydratase_[Papilio_machaon]
GO:0007219 P Notch signaling pathway
GO:0008446 F GDP-mannose 4,6-dehydratase activity
GO:0016829 F lyase activity
GO:0019673 P GDP-mannose metabolic process
GO:0042350 P GDP-L-fucose biosynthetic process
GO:0042351 P 'de novo' GDP-L-fucose biosynthetic process
GO:0048477 P oogenesis
GO:2000035 P regulation of stem cell division
FPKM:0.00 TPM:0.00
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