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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1741 A_BomoFB_comp10375_c0_seq7
1218bp
 nuclear_Y/CCAAT-box_binding_factor_C_subunit_NF/YC_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016602 C CCAAT-binding factor complex
GO:0046982 F protein heterodimerization activity
FPKM:19.09 TPM:20.92
1742 A_BomoFB_comp10375_c0_seq8
714bp
 hypothetical_protein_[Alistipes_shahii]
FPKM:1.68 TPM:1.84
1743 A_BomoFB_comp103766_c0_seq1
829bp
FPKM:1.76 TPM:1.93
1744 A_BomoFB_comp10376_c0_seq1
507bp
 Protein_penguin_[Papilio_xuthus]
FPKM:1.67 TPM:1.83
1745 A_BomoFB_comp10376_c0_seq2
1910bp
 putative_penguin_[Heliconius_melpomene]
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005575 C cellular_component
GO:0005730 C nucleolus
GO:0006417 P regulation of translation
GO:0007475 P apposition of dorsal and ventral imaginal disc-derived wing surfaces
FPKM:2.51 TPM:2.75
1746 A_BomoFB_comp10376_c0_seq3
975bp
 PREDICTED:_protein_penguin_[Papilio_machaon]
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005575 C cellular_component
GO:0005730 C nucleolus
GO:0006417 P regulation of translation
GO:0007475 P apposition of dorsal and ventral imaginal disc-derived wing surfaces
FPKM:0.29 TPM:0.32
1747 A_BomoFB_comp10376_c0_seq4
2017bp
 PREDICTED:_protein_penguin_[Papilio_xuthus]
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005575 C cellular_component
GO:0005730 C nucleolus
GO:0006417 P regulation of translation
GO:0007475 P apposition of dorsal and ventral imaginal disc-derived wing surfaces
FPKM:4.12 TPM:4.51
1748 A_BomoFB_comp10376_c0_seq5
614bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_protein_penguin_[Papilio_polytes]
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005575 C cellular_component
GO:0005730 C nucleolus
GO:0006417 P regulation of translation
GO:0007475 P apposition of dorsal and ventral imaginal disc-derived wing surfaces
FPKM:0.00 TPM:0.00
1749 A_BomoFB_comp10377_c1_seq1
269bp
FPKM:0.00 TPM:0.00
1750 A_BomoFB_comp10377_c1_seq2
281bp
FPKM:2.71 TPM:2.97
1751 A_BomoFB_comp10377_c2_seq1
2000bp
 eukaryotic_initiation_factor_5C_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0007616 P long-term memory
GO:0016199 P axon midline choice point recognition
GO:0017148 P negative regulation of translation
GO:0030175 C filopodium
GO:0030424 C axon
GO:0030707 P ovarian follicle cell development
GO:0031369 F translation initiation factor binding
GO:0043022 F ribosome binding
GO:0043025 C neuronal cell body
GO:0044295 C axonal growth cone
GO:0048149 P behavioral response to ethanol
GO:0048477 P oogenesis
GO:0048663 P neuron fate commitment
GO:0051491 P positive regulation of filopodium assembly
FPKM:37.52 TPM:41.11
1752 A_BomoFB_comp10377_c2_seq2
503bp
FPKM:0.98 TPM:1.08
1753 A_BomoFB_comp10377_c2_seq3
2624bp
 eukaryotic_initiation_factor_5C_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0007616 P long-term memory
GO:0016199 P axon midline choice point recognition
GO:0017148 P negative regulation of translation
GO:0030175 C filopodium
GO:0030424 C axon
GO:0030707 P ovarian follicle cell development
GO:0031369 F translation initiation factor binding
GO:0043022 F ribosome binding
GO:0043025 C neuronal cell body
GO:0044295 C axonal growth cone
GO:0048149 P behavioral response to ethanol
GO:0048477 P oogenesis
GO:0048663 P neuron fate commitment
GO:0051491 P positive regulation of filopodium assembly
FPKM:55.41 TPM:60.72
1754 A_BomoFB_comp10377_c2_seq4
2089bp
 ADP-ribosylation_factor_GTPase-activating_protein_3_[Papilio_xuthus]
FPKM:0.00 TPM:0.00
1755 A_BomoFB_comp10377_c2_seq5
1127bp
FPKM:2.61 TPM:2.86
1756 A_BomoFB_comp10377_c2_seq6
2708bp
 ADP-ribosylation_factor_GTPase-activating_protein_3_[Papilio_xuthus]
FPKM:2.03 TPM:2.23
1757 A_BomoFB_comp10377_c2_seq7
2084bp
 ADP-ribosylation_factor_GTPase-activating_protein_3_[Papilio_xuthus]
FPKM:6.52 TPM:7.14
1758 A_BomoFB_comp10377_c2_seq8
508bp
 hypothetical_protein_ABR58_07180_[Acidimicrobium_sp._BACL19_MAG-120924-bin39]
FPKM:23.32 TPM:25.55
1759 A_BomoFB_comp103784_c0_seq1
1472bp
 PREDICTED:_protein_lunapark-B_[Papilio_polytes]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0046872 F metal ion binding
GO:0071782 C endoplasmic reticulum tubular network
GO:0071786 P endoplasmic reticulum tubular network organization
FPKM:2.82 TPM:3.09
1760 A_BomoFB_comp10378_c0_seq1
2184bp
FPKM:0.11 TPM:0.12
1761 A_BomoFB_comp10378_c0_seq10
2344bp
FPKM:7.50 TPM:8.22
1762 A_BomoFB_comp10378_c0_seq11
1184bp
 PREDICTED:_aquaporin-12_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005737 C cytoplasm
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:3.25 TPM:3.56
1763 A_BomoFB_comp10378_c0_seq12
1273bp
 PREDICTED:_aquaporin-12_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005737 C cytoplasm
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:10.20 TPM:11.17
1764 A_BomoFB_comp10378_c0_seq2
1375bp
 PREDICTED:_aquaporin-12_isoform_X1_[Amyelois_transitella]
GO:0005215 F transporter activity
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:1.00 TPM:1.10
1765 A_BomoFB_comp10378_c0_seq3
802bp
FPKM:0.00 TPM:0.00
1766 A_BomoFB_comp10378_c0_seq4
632bp
FPKM:1.45 TPM:1.59
1767 A_BomoFB_comp10378_c0_seq5
623bp
FPKM:4.86 TPM:5.33
1768 A_BomoFB_comp10378_c0_seq6
811bp
FPKM:7.53 TPM:8.25
1769 A_BomoFB_comp10378_c0_seq7
401bp
FPKM:4.23 TPM:4.64
1770 A_BomoFB_comp10378_c0_seq8
1286bp
 PREDICTED:_aquaporin-12_isoform_X1_[Amyelois_transitella]
GO:0005215 F transporter activity
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:0.42 TPM:0.46
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