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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1351 A_BomoFB_comp10308_c1_seq2
3905bp
 putative_DNA-directed_RNA_polymerase_II_largest_subunit_[Danaus_plexippus]
FPKM:4.40 TPM:4.82
1352 A_BomoFB_comp10309_c0_seq1
2586bp
FPKM:2.20 TPM:2.41
1353 A_BomoFB_comp10309_c0_seq2
3727bp
 PREDICTED:_RNA-binding_protein_5-A-like_isoform_X1_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0000245 P spliceosomal complex assembly
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0006915 P apoptotic process
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0042981 P regulation of apoptotic process
GO:0043065 P positive regulation of apoptotic process
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
FPKM:1.04 TPM:1.14
1354 A_BomoFB_comp10309_c0_seq3
2238bp
FPKM:0.00 TPM:0.00
1355 A_BomoFB_comp10309_c0_seq4
3379bp
 PREDICTED:_RNA-binding_protein_5-A-like_isoform_X1_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0000245 P spliceosomal complex assembly
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0006915 P apoptotic process
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0042981 P regulation of apoptotic process
GO:0043065 P positive regulation of apoptotic process
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
FPKM:3.38 TPM:3.70
1356 A_BomoFB_comp10309_c0_seq5
2517bp
 PREDICTED:_RNA-binding_protein_5-A-like_isoform_X2_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0000245 P spliceosomal complex assembly
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0006915 P apoptotic process
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0042981 P regulation of apoptotic process
GO:0043065 P positive regulation of apoptotic process
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
FPKM:6.59 TPM:7.22
1357 A_BomoFB_comp1030_c0_seq1
211bp
 PREDICTED:_uncharacterized_protein_LOC101741141_isoform_X3_[Bombyx_mori]
FPKM:2.86 TPM:3.13
1358 A_BomoFB_comp10310_c0_seq1
1733bp
FPKM:0.20 TPM:0.22
1359 A_BomoFB_comp10310_c0_seq2
2479bp
 putative_Wdr45l_protein_[Danaus_plexippus]
FPKM:3.84 TPM:4.21
1360 A_BomoFB_comp10310_c0_seq3
3265bp
 flavin-dependent_monooxygenase_FMO2_precursor_[Bombyx_mori]
GO:0004497 F monooxygenase activity
GO:0004499 F N,N-dimethylaniline monooxygenase activity
GO:0005576 C extracellular region
GO:0009820 P alkaloid metabolic process
GO:0016491 F oxidoreductase activity
GO:0033784 F senecionine N-oxygenase activity
GO:0050660 F flavin adenine dinucleotide binding
GO:0050661 F NADP binding
GO:0051289 P protein homotetramerization
GO:0055114 P obsolete oxidation-reduction process
FPKM:19.39 TPM:21.25
1361 A_BomoFB_comp10310_c0_seq4
1995bp
 putative_Wdr45l_protein_[Danaus_plexippus]
FPKM:0.65 TPM:0.72
1362 A_BomoFB_comp10310_c0_seq5
2489bp
 hypothetical_protein_CcBV_8.1_[Cotesia_congregata_bracovirus]
FPKM:0.00 TPM:0.00
1363 A_BomoFB_comp10310_c0_seq6
2005bp
 hypothetical_protein_CcBV_8.1_[Cotesia_congregata_bracovirus]
FPKM:0.49 TPM:0.53
1364 A_BomoFB_comp10310_c1_seq1
255bp
FPKM:1.44 TPM:1.57
1365 A_BomoFB_comp10311_c0_seq1
1059bp
 PREDICTED:_protein-L-isoaspartate_O-methyltransferase_domain-containing_protein_2-like_[Plutella_xylostella]
GO:0004719 F protein-L-isoaspartate (D-aspartate) O-methyltransferase activity
GO:0005737 C cytoplasm
GO:0006464 P cellular protein modification process
GO:0006479 P protein methylation
GO:0032259 P methylation
FPKM:23.80 TPM:26.08
1366 A_BomoFB_comp10312_c0_seq1
3047bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0046872 F metal ion binding
FPKM:3.09 TPM:3.39
1367 A_BomoFB_comp10312_c0_seq2
2243bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0046872 F metal ion binding
FPKM:0.00 TPM:0.00
1368 A_BomoFB_comp103131_c0_seq1
318bp
FPKM:1.20 TPM:1.31
1369 A_BomoFB_comp10313_c0_seq1
2258bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_rho_guanine_nucleotide_exchange_factor_11_[Bombyx_mori]
GO:0001664 F G protein-coupled receptor binding
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0016020 C membrane
GO:0035023 P regulation of Rho protein signal transduction
GO:0035556 P intracellular signal transduction
GO:0043547 P positive regulation of GTPase activity
GO:0070062 C extracellular exosome
FPKM:3.16 TPM:3.46
1370 A_BomoFB_comp10313_c0_seq2
326bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_rho_guanine_nucleotide_exchange_factor_11_[Bombyx_mori]
FPKM:2.30 TPM:2.52
1371 A_BomoFB_comp10313_c0_seq3
3312bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_rho_guanine_nucleotide_exchange_factor_11_[Bombyx_mori]
GO:0001664 F G protein-coupled receptor binding
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0016020 C membrane
GO:0035023 P regulation of Rho protein signal transduction
GO:0035556 P intracellular signal transduction
GO:0043547 P positive regulation of GTPase activity
GO:0070062 C extracellular exosome
FPKM:1.49 TPM:1.64
1372 A_BomoFB_comp10313_c0_seq4
3088bp
 PREDICTED:_pleckstrin_homology_domain-containing_family_G_member_5-like_[Plutella_xylostella]
GO:0001505 P regulation of neurotransmitter levels
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007266 P Rho protein signal transduction
GO:0016020 C membrane
GO:0035023 P regulation of Rho protein signal transduction
GO:0035556 P intracellular signal transduction
GO:0043547 P positive regulation of GTPase activity
FPKM:0.17 TPM:0.19
1373 A_BomoFB_comp10313_c0_seq5
2020bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_rho_guanine_nucleotide_exchange_factor_11_[Bombyx_mori]
GO:0001505 P regulation of neurotransmitter levels
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007266 P Rho protein signal transduction
GO:0016020 C membrane
GO:0035023 P regulation of Rho protein signal transduction
GO:0035556 P intracellular signal transduction
GO:0043547 P positive regulation of GTPase activity
FPKM:0.10 TPM:0.11
1374 A_BomoFB_comp10313_c0_seq6
3061bp
 PREDICTED:_pleckstrin_homology_domain-containing_family_G_member_5-like_[Plutella_xylostella]
GO:0001505 P regulation of neurotransmitter levels
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007266 P Rho protein signal transduction
GO:0016020 C membrane
GO:0035023 P regulation of Rho protein signal transduction
GO:0035556 P intracellular signal transduction
GO:0043547 P positive regulation of GTPase activity
FPKM:0.81 TPM:0.89
1375 A_BomoFB_comp10313_c0_seq7
3285bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_rho_guanine_nucleotide_exchange_factor_11_[Bombyx_mori]
GO:0001664 F G protein-coupled receptor binding
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0016020 C membrane
GO:0035023 P regulation of Rho protein signal transduction
GO:0035556 P intracellular signal transduction
GO:0043547 P positive regulation of GTPase activity
GO:0070062 C extracellular exosome
FPKM:6.00 TPM:6.57
1376 A_BomoFB_comp10313_c0_seq8
2034bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_rho_guanine_nucleotide_exchange_factor_11_[Bombyx_mori]
GO:0001505 P regulation of neurotransmitter levels
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007266 P Rho protein signal transduction
GO:0016020 C membrane
GO:0035023 P regulation of Rho protein signal transduction
GO:0035556 P intracellular signal transduction
GO:0043547 P positive regulation of GTPase activity
FPKM:0.13 TPM:0.14
1377 A_BomoFB_comp10313_c0_seq9
2244bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_rho_guanine_nucleotide_exchange_factor_11_[Bombyx_mori]
GO:0001664 F G protein-coupled receptor binding
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0016020 C membrane
GO:0035023 P regulation of Rho protein signal transduction
GO:0035556 P intracellular signal transduction
GO:0043547 P positive regulation of GTPase activity
GO:0070062 C extracellular exosome
FPKM:1.84 TPM:2.02
1378 A_BomoFB_comp10314_c0_seq1
1913bp
 Microtubule-actin_cross-linking_factor_1,_isoform_4_[Papilio_machaon]
FPKM:2.39 TPM:2.61
1379 A_BomoFB_comp10314_c0_seq2
609bp
 Microtubule-actin_cross-linking_factor_1,_isoform_4_[Papilio_machaon]
FPKM:0.34 TPM:0.37
1380 A_BomoFB_comp10314_c0_seq3
462bp
 PREDICTED:_dystonin-like_[Bombyx_mori]
FPKM:0.00 TPM:0.00
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