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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp10309_c0_seq5
Scaffold_idBomo_Chr28
NCBI non-redundant
(nr)		PREDICTED:_RNA-binding_protein_5-A-like_isoform_X2_[Papilio_xuthus]
Ontology
GO:0000166 F nucleotide binding
GO:0000245 P spliceosomal complex assembly
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0006915 P apoptotic process
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0042981 P regulation of apoptotic process
GO:0043065 P positive regulation of apoptotic process
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
Transcript
Level		FPKM:6.59 TPM:7.22
ORF EntryO_BomoFB13026_complete:A_BomoFB_comp10309_c0_seq5
Sequence
(Nucleotide)
CCAGTAGCCACTTAACACCAGGTGAGCTGTGGGATCGTCCACTCATCAAAGCAATAAATA
ATAAAAATAAATGTAAATTAATTCCAACCAGTAACATTTTCAACAGGAAGATTAGTTTTC
TAATTATTTAAAAAAACTGGTTAATTTTGAGGATGACAACGACTAACCTGCAGCTCCTTC
CTGAACTGAAAAGAAACATTAATTTTTAAGACAAAATGAAAAATACCCACCTATTTCCCT
TCTTCTTGTCCAACAACTTCTTTATATCTTGCTATCATAAGTTTCTTAACTGTATCGCGA
TATGTTTCACCAGGTGTGGGAGTGTATATACCTCTTTTCTGCCCCAGACCAGCTAAACTT
GGCCTCTGTTCTGCTTCTATGGGAGCTATTCGTCCCTGCTCAGTCTTACCTAAACCTCGA
CCTTCCGACCAGCCCATTTTTTGCAGCATTTTACCTCCTATTGTATCTACTACATTTGGA
GGTGGGTGCGGGTTAATGGGTGGACCTATTGGTTCAGAAGGCTCATAACGTTTTCTTATC
ATTGGAGGCTCATCTTCACCAAATTTCATACGTCGCTCAGCTGCCCTGTCTCTATAACCA
TTCATCTGTGGAATCAAGTCATTCTTCTTCCTAAATTCAACTAGATTTTGTTTGTGCAAG
TCTGACATAACTTTATGCTTATTCAACACTTCTACAGAAGGGAATTTCCTTTTGCATAAC
AAGCAGGTTAATTTGTCCCAGTCAATAATGTCATCATCATTATCAAATACTGGTTCTGAG
ATCTTTTTGACCAAGAATTCATCTGTGTTGGGAGGTGGGGATATTTCTCTTACATGAGTT
AATGATGGTCCAGCTCCTAGTACTGAAAAACCAATGTCTGCTGAGCCTTTGCTAGCACTT
GTGTCAGTTGGCTGTTCCATAACAAAGTTACTCCGAGCATTCTCTTTCTTTTGATTAGAG
TCCGTGCCCATCTTTCCATATCCTTAGCTATCTTTTTAGCTACTTTAACTTTGTCTTCTT
TGTCTCTCCTTTTCTTTTCATCAGGCTCCTTGGCCTCTCTTTGTTTGTTTTGTTCAGCAT
TCTGAGCCTGTGTTGCAGCAATATAAGTGTTTGTTTTACCATCCCAATACATATATTGAC
TGATTTGACTATTATAAAAATATTGTGTCTTCCCATCATAGTATAAACAAGTTGACGGGT
CATAATAGTAACCAGATGACTCATCATACATGAATGTTCTCACATCTGGGGCAGGATAAA
CTGTCTTCCCATCACCTATGGGTACATTTGTTTTTGTAGTTTGGGTAGTACCAGTGAAAG
GTACAGCACCAACTGGCGTCCATGATAGCTGTCTAGCCTGGGCTGCCGATATAGCAGACT
GAGCTACTGCAGCAGCTGCATTGACTCGATCAGCCTCAGACATTGCTTGAGTTGTTGCAC
CACTGTACGAAGACATTTGAGAGTAGTATGACGTATAGTCAACTTGTGTTGGTTTAACAA
TTTTTTTAGGTTCATTGTAAAAGCTTATAAGCACTTCTCGACCGTCAATCCTTAATGGTG
GTTGGAGATTCACCAACTCTGTATGTGCTGTTGTAGAATCTGCTATGGAGTTGAAATTGA
TGTAGGCGAGACACTTTGATGCACCTGTTAAAGTTTCTCTACCAATTGAAATACCTACAA
TTAACTCTAGAACTTCTTTACTGCAACGTAGTTTAAGCTCTTCCAATATATTTTCTTCAG
TAGTCAAAGCATCTAGCCTCCTAAAGAGTAACCTCTTTGTGATGCCAGGTGTTTCGACTA
CACCGTTACGATCCCCATCACCTCCATAAACTACACCCTCCGATCTTTTCCCATTACAAG
TTCTACGGTAACAGACCTGACGTCTTTTAAAGTTGTATAGACCACACTTGCAGATCCAAT
CACCCGGTGATGCGTTGTTCTGCACCTCATCCTGGTGCTTGTCCTTTTCTATTTCCATAT
CAGACCTGTCCCTCTCACGACTATCGGATCGACTACTAGACCGTGAGCTCTTTTTGTCAT
CGCTGATGACGGGCGGCGAGGGGGGCGCGGGCGCTTCCTCGTACCGTTTTCTGTCGCGTT
CTCGGTCACGGTCGCGATCCCGGTCGTGGCGGTCACGCCGAAAGTCGCGCTCGTGACGAG
GCCGTCTATCATGCGAGTGTCGGTGTCGGGATGGCGACCTGCACTCAGGGCTGACGTTCC
TAGGCTCCCATACAGGCGACCGATCGCGGAGTTCCCATTTGTTGGTGTCCCACCTCGAGC
AGCGCTCCTCTCGACTTCGCCAAGACATCGTAGCCTGCTGTAACGTAATTACGAGTAACT
TCCCTAGTATCTTAACACTTTAGGCCGGATGTTAAATTATTTACTTTAATAAAGTGCACT
ACACTTGAAAATTCTGTGATCGTAATTAGATTATTTCCTTTCATAAATCATTACAAAAGA
CTGACGCCATATTTTTACTCGATATTTTTCATTTTTTTTTAAATCCATCTCCAACAT
(2517 bp)

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