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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp10309_c0_seq2
Scaffold_idBomo_Chr28
NCBI non-redundant
(nr)		PREDICTED:_RNA-binding_protein_5-A-like_isoform_X1_[Papilio_xuthus]
Ontology
GO:0000166 F nucleotide binding
GO:0000245 P spliceosomal complex assembly
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0006915 P apoptotic process
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0042981 P regulation of apoptotic process
GO:0043065 P positive regulation of apoptotic process
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
Transcript
Level		FPKM:1.04 TPM:1.14
ORF EntryO_BomoFB13022_complete:A_BomoFB_comp10309_c0_seq2
Sequence
(Nucleotide)
GGCCGCGTCACATTTTTTTATCGTACATATTTTAAATGCACAATACTTTTAACCCACGCC
TTACAATCATCGAATCTCGAAAATTTGTTCAAAACTAACTGCTATAAATACCTAAGTAAT
AATGATAATAATAATAAGACTGAATGAAAAATTTAAAAATCCCATTTACCCAATACTACA
CATATGCTAGTGAAATTAAAATGTACCTAACTATATACACGTATATGTTAATTGCTGTTT
TTATTCTTTTATTAAAATAAATCATTCTTTTATTATCGAATAGAATCCATCAACAGACGT
CGTTGTGATGTTTTACTAGGACGGCAAATTCAATCGACTAGTATGCACTTATTGAGTACA
AATTATAAGTTACGGGAAAATGCTACCGTACAGCTGACAAGGGCGCATTTCGGCGCTTCT
ATATAAGTTTAGGATTTCATGTATATACATTTATTTTAACAACAATTATGCAACTTGATT
ACCTACCTTTTAATACTAATCTCTGTAAATTATTTATGTCTTTATTGTAATAATCATCAT
TAAATTTAGCTTAAATGAACACCTATGTTTAGGCTTAATTTAATCTTGTACAAGAACTCA
TCTTCGACAGGCTTTCATTAGCTAGACCTGTATCGACCTAGCCAACGTAATATTCACAAA
ATCAACGCAGATTAACTTAAATATTGACATTCATCAATGAAAATACATTAGTTTCATTAC
TTTAGCGTAATATCTTGCCCCGAAAAACACTAGAATTAAAATATTACTTTAATTTTTGGG
CTTATTATTAGAGCGTGTTTTTATAATATAACCTACCTATATTTATCTTTATTTACAATC
AAACGCAATCTCAAAATTCCTTACTACATAATTATTTTATATATATATACATTAAAGTTA
AACTATACACGAAACGCTACGGAAGAAAGCTAAATATTTTTAAAATGGCGTTTGATCAAT
TCATTTCCGATCCAACGAGTATAAAATGAAGTACTTTTTAATATTTTGTTTGGCACGTGG
TTCCAGCTTCGCGCGTAGACTCTGCAATGTAAATTGTCAAAAATGTCAGTGTTATCTCTT
GGTTCACAACACCTTGCACAAACTAGTCACAATTCTTCACGCTTTTTGTCTTCTGTTTCC
ATTGTGTCTTAATCATTCGGAGATCGGAAAGGATGTTGACAATTTCTCATAAAAAAAAAT
TAAATCTAGGAACGTTTGTACTATTTCCCAGAGTCACAAAGAAGAGGTAAAAATAAATAG
GTTGTTACCGAAAGTGTCAACATCAAATTTTGCTGTAAAAATTCACGATAAAAAGGCAGT
CACGACGTTTCCCACATAAAAAATTATTCACCTGTATGAAAAAGGTCACTTATAATATTA
ATTACTCACCGATTGTCGAATACGCGTGTGACGGGAGCGTTGTAGAATTCCAGGTCGAAT
CTATTTCCCTTCTTCTTGTCCAACAACTTCTTTATATCTTGCTATCATAAGTTTCTTAAC
TGTATCGCGATATGTTTCACCAGGTGTGGGAGTGTATATACCTCTTTTCTGCCCCAGACC
AGCTAAACTTGGCCTCTGTTCTGCTTCTATGGGAGCTATTCGTCCCTGCTCAGTCTTACC
TAAACCTCGACCTTCCGACCAGCCCATTTTTTGCAGCATTTTACCTCCTATTGTATCTAC
TACATTTGGAGGTGGGTGCGGGTTAATGGGTGGACCTATTGGTTCAGAAGGCTCATAACG
TTTTCTTATCATTGGAGGCTCATCTTCACCAAATTTCATACGTCGCTCAGCTGCCCTGTC
TCTATAACCATTCATCTGTGGAATCAAGTCATTCTTCTTCCTAAATTCAACTAGATTTTG
TTTGTGCAAGTCTGACATAACTTTATGCTTATTCAACACTTCTACAGAAGGGAATTTCCT
TTTGCATAACAAGCAGGTTAATTTGTCCCAGTCAATAATGTCATCATCATTATCAAATAC
TGGTTCTGAGATCTTTTTGACCAAGAATTCATCTGTGTTGGGAGGTGGGGATATTTCTCT
TACATGAGTTAATGATGGTCCAGCTCCTAGTACTGAAAAACCAATGTCTGCTGAGCCTTT
GCTAGCACTTGTGTCAGTTGGCTGTTCCATAACAAAGTTACTCCGAGCATTCTCTTTCTT
TTGATTAGAGTCCGTGCCCATCTTTCCATATCCTTAGCTATCTTTTTAGCTACTTTAACT
TTGTCTTCTTTGTCTCTCCTTTTCTTTTCATCAGGCTCCTTGGCCTCTCTTTGTTTGTTT
TGTTCAGCATTCTGAGCCTGTGTTGCAGCAATATAAGTGTTTGTTTTACCATCCCAATAC
ATATATTGACTGATTTGACTATTATAAAAATATTGTGTCTTCCCATCATAGTATAAACAA
GTTGACGGGTCATAATAGTAACCAGATGACTCATCATACATGAATGTTCTCACATCTGGG
GCAGGATAAACTGTCTTCCCATCACCTATGGGTACATTTGTTTTTGTAGTTTGGGTAGTA
CCAGTGAAAGGTACAGCACCAACTGGCGTCCATGATAGCTGTCTAGCCTGGGCTGCCGAT
ATAGCAGACTGAGCTACTGCAGCAGCTGCATTGACTCGATCAGCCTCAGACATTGCTTGA
GTTGTTGCACCACTGTACGAAGACATTTGAGAGTAGTATGACGTATAGTCAACTTGTGTT
GGTTTAACAATTTTTTTAGGTTCATTGTAAAAGCTTATAAGCACTTCTCGACCGTCAATC
CTTAATGGTGGTTGGAGATTCACCAACTCTGTATGTGCTGTTGTAGAATCTGCTATGGAG
TTGAAATTGATGTAGGCGAGACACTTTGATGCACCTGTTAAAGTTTCTCTACCAATTGAA
ATACCTACAATTAACTCTAGAACTTCTTTACTGCAACGTAGTTTAAGCTCTTCCAATATA
TTTTCTTCAGTAGTCAAAGCATCTAGCCTCCTAAAGAGTAACCTCTTTGTGATGCCAGGT
GTTTCGACTACACCGTTACGATCCCCATCACCTCCATAAACTACACCCTCCGATCTTTTC
CCATTACAAGTTCTACGGTAACAGACCTGACGTCTTTTAAAGTTGTATAGACCACACTTG
CAGATCCAATCACCCGGTGATGCGTTGTTCTGCACCTCATCCTGGTGCTTGTCCTTTTCT
ATTTCCATATCAGACCTGTCCCTCTCACGACTATCGGATCGACTACTAGACCGTGAGCTC
TTTTTGTCATCGCTGATGACGGGCGGCGAGGGGGGCGCGGGCGCTTCCTCGTACCGTTTT
CTGTCGCGTTCTCGGTCACGGTCGCGATCCCGGTCGTGGCGGTCACGCCGAAAGTCGCGC
TCGTGACGAGGCCGTCTATCATGCGAGTGTCGGTGTCGGGATGGCGACCTGCACTCAGGG
CTGACGTTCCTAGGCTCCCATACAGGCGACCGATCGCGGAGTTCCCATTTGTTGGTGTCC
CACCTCGAGCAGCGCTCCTCTCGACTTCGCCAAGACATCGTAGCCTGCTGTAACGTAATT
ACGAGTAACTTCCCTAGTATCTTAACACTTTAGGCCGGATGTTAAATTATTTACTTTAAT
AAAGTGCACTACACTTGAAAATTCTGTGATCGTAATTAGATTATTTCCTTTCATAAATCA
TTACAAAAGACTGACGCCATATTTTTACTCGATATTTTTCATTTTTTTTTAAATCCATCT
CCAACAT
(3727 bp)

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